RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 PDE6GP18545 87 aa11.52□□□□□ -0.57
SMARCA4-207ENST00000541122 XCL1P47992 114 aa11.52□□□□□ -0.57
SMARCA4-207ENST00000541122 K7EMT4 169 aa11.51□□□□□ -0.57
SMARCA4-207ENST00000541122 TMEM61Q8N0U2 210 aa11.51□□□□□ -0.57
SMARCA4-207ENST00000541122 CRIP3Q6Q6R5 217 aa11.51□□□□□ -0.57
SMARCA4-207ENST00000541122 ZNF106Q9H2Y7 1883 aaKnown RBP11.51□□□□□ -0.57
SMARCA4-207ENST00000541122 IGHV3-30-3P0DP02 117 aa11.51□□□□□ -0.57
SMARCA4-207ENST00000541122 LINC00574Q9H8X3 128 aa11.51□□□□□ -0.57
SMARCA4-207ENST00000541122 PSCAO43653 123 aa11.51□□□□□ -0.57
SMARCA4-207ENST00000541122 IGFL2Q6UWQ7 119 aa11.51□□□□□ -0.57
SMARCA4-207ENST00000541122 UBE2DNLQ8IWF7 75 aa11.51□□□□□ -0.57
SMARCA4-207ENST00000541122 E7EUB6 86 aa11.5□□□□□ -0.57
SMARCA4-207ENST00000541122 EIF4EBP1Q13541 118 aaPredicted RBP11.5□□□□□ -0.57
SMARCA4-207ENST00000541122 SPATA25Q9BR10 227 aa11.5□□□□□ -0.57
SMARCA4-207ENST00000541122 U3KQK5 164 aa11.5□□□□□ -0.57
SMARCA4-207ENST00000541122 K7ENP7 123 aa11.5□□□□□ -0.57
SMARCA4-207ENST00000541122 APOC4P55056 127 aa11.5□□□□□ -0.57
SMARCA4-207ENST00000541122 BRWD1-AS2P59051 145 aa11.5□□□□□ -0.57
SMARCA4-207ENST00000541122 LECT2O14960 151 aa11.5□□□□□ -0.57
SMARCA4-207ENST00000541122 P0DMU3 169 aa11.5□□□□□ -0.57
SMARCA4-207ENST00000541122 FAM231AP0DMU4 169 aa11.5□□□□□ -0.57
SMARCA4-207ENST00000541122 FAM231CP0DMU5 169 aa11.5□□□□□ -0.57
SMARCA4-207ENST00000541122 Q8N9W7 124 aa11.5□□□□□ -0.57
SMARCA4-207ENST00000541122 NEXN-AS1Q8NBZ9 246 aa11.49□□□□□ -0.57
SMARCA4-207ENST00000541122 RMI2Q96E14 147 aa11.49□□□□□ -0.57
SMARCA4-207ENST00000541122 MALRD1Q5VYJ5 2156 aa11.49□□□□□ -0.57
SMARCA4-207ENST00000541122 TMEM256-PLSCR3K7ERE1 68 aa11.49□□□□□ -0.57
SMARCA4-207ENST00000541122 COX7A2LO14548 114 aa11.49□□□□□ -0.57
SMARCA4-207ENST00000541122 PRR30Q53SZ7 412 aaPredicted RBP11.49□□□□□ -0.57
SMARCA4-207ENST00000541122 C5orf38Q86SI9 138 aa11.49□□□□□ -0.57
SMARCA4-207ENST00000541122 NOP10Q9NPE3 64 aaKnown RBP11.49□□□□□ -0.57
SMARCA4-207ENST00000541122 NCKAP5O14513 1909 aa11.48□□□□□ -0.57
SMARCA4-207ENST00000541122 WT1P19544 449 aaPredicted RBP11.48□□□□□ -0.57
SMARCA4-207ENST00000541122 CXCL5P42830 114 aa11.48□□□□□ -0.57
SMARCA4-207ENST00000541122 HIST2H2BCQ6DN03 193 aa11.48□□□□□ -0.57
SMARCA4-207ENST00000541122 DOCK10Q96BY6 2186 aa11.48□□□□□ -0.57
SMARCA4-207ENST00000541122 C5orf47Q569G3 176 aa11.48□□□□□ -0.57
SMARCA4-207ENST00000541122 AJUBAQ96IF1 538 aa11.48□□□□□ -0.57
SMARCA4-207ENST00000541122 A0A0J9YXY3 114 aa11.48□□□□□ -0.57
SMARCA4-207ENST00000541122 DAND5Q8N907 189 aa11.48□□□□□ -0.57
SMARCA4-207ENST00000541122 C16orf74Q96GX8 76 aa11.48□□□□□ -0.57
SMARCA4-207ENST00000541122 ALPK3Q96L96 1907 aa11.47□□□□□ -0.57
SMARCA4-207ENST00000541122 ATP5EP2Q5VTU8 51 aa11.47□□□□□ -0.57
SMARCA4-207ENST00000541122 C3orf22Q8N5N4 141 aa11.47□□□□□ -0.57
SMARCA4-207ENST00000541122 C3orf56Q8N813 242 aa11.47□□□□□ -0.57
SMARCA4-207ENST00000541122 CGB3P0DN86 165 aa11.47□□□□□ -0.57
SMARCA4-207ENST00000541122 CGB7P0DN87 165 aa11.47□□□□□ -0.57
SMARCA4-207ENST00000541122 MP68P56378 58 aa11.46□□□□□ -0.57
SMARCA4-207ENST00000541122 C2orf91Q6ZV80 131 aa11.46□□□□□ -0.57
SMARCA4-207ENST00000541122 TRBV7-3A0A075B6L6 115 aa11.46□□□□□ -0.57
SMARCA4-207ENST00000541122 NREPQ16612 68 aa11.46□□□□□ -0.57
SMARCA4-207ENST00000541122 NFE4Q86UQ8 179 aa11.46□□□□□ -0.57
SMARCA4-207ENST00000541122 CADP27708 2225 aa11.46□□□□□ -0.57
SMARCA4-207ENST00000541122 PROP1O75360 226 aa11.46□□□□□ -0.58
SMARCA4-207ENST00000541122 EP300Q09472 2414 aaPredicted RBP11.46□□□□□ -0.58
SMARCA4-207ENST00000541122 PLA2G2CQ5R387 149 aa11.45□□□□□ -0.58
SMARCA4-207ENST00000541122 ZNF80P51504 273 aaPredicted RBP11.45□□□□□ -0.58
SMARCA4-207ENST00000541122 IMUPQ9GZP8 106 aa11.45□□□□□ -0.58
SMARCA4-207ENST00000541122 TRBV30A0A0K0K1B3 111 aa11.45□□□□□ -0.58
SMARCA4-207ENST00000541122 C5orf56Q8N8D9 126 aa11.45□□□□□ -0.58
SMARCA4-207ENST00000541122 CREBBPQ92793 2442 aa11.45□□□□□ -0.58
SMARCA4-207ENST00000541122 NOTCH4Q99466 2003 aa11.45□□□□□ -0.58
SMARCA4-207ENST00000541122 FANCD2OSQ96PS1 177 aa11.45□□□□□ -0.58
SMARCA4-207ENST00000541122 DKK4Q9UBT3 224 aa11.45□□□□□ -0.58
SMARCA4-207ENST00000541122 VPREB3Q9UKI3 123 aa11.45□□□□□ -0.58
SMARCA4-207ENST00000541122 CLPSL2Q6UWE3 100 aa11.44□□□□□ -0.58
SMARCA4-207ENST00000541122 TP73-AS1Q9UF72 201 aa11.44□□□□□ -0.58
SMARCA4-207ENST00000541122 A0A0J9YY99 117 aa11.44□□□□□ -0.58
SMARCA4-207ENST00000541122 TEX49A0A1B0GTD5 131 aa11.44□□□□□ -0.58
SMARCA4-207ENST00000541122 HIST2H2BDQ6DRA6 164 aa11.44□□□□□ -0.58
SMARCA4-207ENST00000541122 DOPEY2Q9Y3R5 2298 aa11.44□□□□□ -0.58
SMARCA4-207ENST00000541122 RNF223E7ERA6 249 aa11.44□□□□□ -0.58
SMARCA4-207ENST00000541122 MYCNOSP40205 109 aa11.44□□□□□ -0.58
SMARCA4-207ENST00000541122 SPTAN1Q13813 2472 aaKnown RBP11.43□□□□□ -0.58
SMARCA4-207ENST00000541122 TMEM89A2RUT3 159 aa11.43□□□□□ -0.58
SMARCA4-207ENST00000541122 USF3Q68DE3 2245 aa11.43□□□□□ -0.58
SMARCA4-207ENST00000541122 GPHB5Q86YW7 130 aa11.43□□□□□ -0.58
SMARCA4-207ENST00000541122 IGKV2D-26A0A0A0MRZ7 120 aa11.43□□□□□ -0.58
SMARCA4-207ENST00000541122 MIR7-3HGQ8N6C7 128 aa11.42□□□□□ -0.58
SMARCA4-207ENST00000541122 ACACAQ13085 2346 aa11.42□□□□□ -0.58
SMARCA4-207ENST00000541122 CACNA1HO95180 2353 aa11.42□□□□□ -0.58
SMARCA4-207ENST00000541122 ODF3Q96PU9 254 aa11.41□□□□□ -0.58
SMARCA4-207ENST00000541122 CFAP126Q5VTH2 177 aa11.41□□□□□ -0.58
SMARCA4-207ENST00000541122 MAPKAPK5-AS1Q8N8E1 139 aa11.41□□□□□ -0.58
SMARCA4-207ENST00000541122 TRBV10-1A0A0K0K1A3 114 aa11.41□□□□□ -0.58
SMARCA4-207ENST00000541122 MED13Q9UHV7 2174 aa11.41□□□□□ -0.58
SMARCA4-207ENST00000541122 NCOR1O75376 2440 aa11.4□□□□□ -0.58
SMARCA4-207ENST00000541122 TMEM223A0PJW6 202 aa11.4□□□□□ -0.58
SMARCA4-207ENST00000541122 WFDC9Q8NEX5 89 aa11.4□□□□□ -0.58
SMARCA4-207ENST00000541122 C14orf132Q9NPU4 83 aa11.4□□□□□ -0.58
SMARCA4-207ENST00000541122 ETDCA0A1B0GVM5 59 aa11.4□□□□□ -0.58
SMARCA4-207ENST00000541122 PLA2G5P39877 138 aa11.4□□□□□ -0.58
SMARCA4-207ENST00000541122 FAM236DA0A1B0GTK5 79 aa11.4□□□□□ -0.59
SMARCA4-207ENST00000541122 IGHV3-33P01772 117 aa11.4□□□□□ -0.59
SMARCA4-207ENST00000541122 FAM236CP0DP71 79 aa11.4□□□□□ -0.59
SMARCA4-207ENST00000541122 ARHGAP21Q5T5U3 1957 aa11.39□□□□□ -0.59
SMARCA4-207ENST00000541122 A0A096LPF7 62 aa11.39□□□□□ -0.59
SMARCA4-207ENST00000541122 DEFB112Q30KQ8 113 aa11.39□□□□□ -0.59
SMARCA4-207ENST00000541122 Q8N7P7 452 aa11.39□□□□□ -0.59
SMARCA4-207ENST00000541122 A0A0J9YX75 114 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms