RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 PCDH15Q96QU1 1955 aa7.83□□□□□ -1.16
TRERF1-205ENST00000541110 TRBV10-2A0A0K0K1G8 114 aa7.83□□□□□ -1.16
TRERF1-205ENST00000541110 J3QRE1 110 aa7.83□□□□□ -1.16
TRERF1-205ENST00000541110 USP17L23D6RBM5 183 aa7.83□□□□□ -1.16
TRERF1-205ENST00000541110 TMEM14CQ9P0S9 112 aa7.83□□□□□ -1.16
TRERF1-205ENST00000541110 SIPA1L1O43166 1804 aa7.83□□□□□ -1.16
TRERF1-205ENST00000541110 IGLC2P0DOY2 106 aa7.83□□□□□ -1.16
TRERF1-205ENST00000541110 IGLC3P0DOY3 106 aa7.83□□□□□ -1.16
TRERF1-205ENST00000541110 LINC01620Q4KN68 170 aa7.83□□□□□ -1.16
TRERF1-205ENST00000541110 DKK2Q9UBU2 259 aa7.83□□□□□ -1.16
TRERF1-205ENST00000541110 FAM110AQ9BQ89 295 aa7.83□□□□□ -1.16
TRERF1-205ENST00000541110 PRR14LQ5THK1 2151 aa7.83□□□□□ -1.16
TRERF1-205ENST00000541110 FHL1Q13642 323 aa7.82□□□□□ -1.16
TRERF1-205ENST00000541110 Q6ZRM9 215 aa7.82□□□□□ -1.16
TRERF1-205ENST00000541110 AJUBAQ96IF1 538 aa7.82□□□□□ -1.16
TRERF1-205ENST00000541110 LHFPL1Q86WI0 220 aa7.82□□□□□ -1.16
TRERF1-205ENST00000541110 ZNF493Q6ZR52 646 aa7.82□□□□□ -1.16
TRERF1-205ENST00000541110 FAM19A1Q7Z5A9 133 aa7.82□□□□□ -1.16
TRERF1-205ENST00000541110 C18orf32Q8TCD1 76 aa7.82□□□□□ -1.16
TRERF1-205ENST00000541110 CENPVL3A0A0U1RRI6 287 aa7.82□□□□□ -1.16
TRERF1-205ENST00000541110 MALRD1Q5VYJ5 2156 aa7.82□□□□□ -1.16
TRERF1-205ENST00000541110 RETNQ9HD89 108 aa7.81□□□□□ -1.16
TRERF1-205ENST00000541110 C2orf70A6NJV1 201 aa7.81□□□□□ -1.16
TRERF1-205ENST00000541110 C3orf22Q8N5N4 141 aa7.81□□□□□ -1.16
TRERF1-205ENST00000541110 FGF23Q9GZV9 251 aaPredicted RBP7.81□□□□□ -1.16
TRERF1-205ENST00000541110 A0A1W2PPM0 123 aa7.81□□□□□ -1.16
TRERF1-205ENST00000541110 K7EMI3 77 aa7.81□□□□□ -1.16
TRERF1-205ENST00000541110 ZNF664Q8N3J9 261 aa7.81□□□□□ -1.16
TRERF1-205ENST00000541110 KLHDC3Q9BQ90 382 aa7.81□□□□□ -1.16
TRERF1-205ENST00000541110 TRAV26-1A0A087WT03 109 aa7.81□□□□□ -1.16
TRERF1-205ENST00000541110 SPINK6Q6UWN8 80 aa7.81□□□□□ -1.16
TRERF1-205ENST00000541110 NTN5Q8WTR8 489 aaPredicted RBP7.81□□□□□ -1.16
TRERF1-205ENST00000541110 COL4A1P02462 1669 aa7.81□□□□□ -1.16
TRERF1-205ENST00000541110 KIR2DL5BA0A0G2JN68 375 aa7.81□□□□□ -1.16
TRERF1-205ENST00000541110 KIR2DL5BA0A0G2JPC4 375 aa7.81□□□□□ -1.16
TRERF1-205ENST00000541110 Q6ZR03 302 aa7.81□□□□□ -1.16
TRERF1-205ENST00000541110 WFDC10BQ8IUB3 73 aa7.81□□□□□ -1.16
TRERF1-205ENST00000541110 KIR2DL5AQ8N109 375 aa7.81□□□□□ -1.16
TRERF1-205ENST00000541110 LGALS9BQ3B8N2 356 aa7.81□□□□□ -1.16
TRERF1-205ENST00000541110 LGALS9CQ6DKI2 356 aa7.81□□□□□ -1.16
TRERF1-205ENST00000541110 MPLKIPQ8TAP9 179 aa7.81□□□□□ -1.16
TRERF1-205ENST00000541110 RAI1Q7Z5J4 1906 aaPredicted RBP7.8□□□□□ -1.16
TRERF1-205ENST00000541110 WT1-ASQ06250 92 aa7.8□□□□□ -1.16
TRERF1-205ENST00000541110 ETDBQ3ZM63 59 aa7.8□□□□□ -1.16
TRERF1-205ENST00000541110 SORL1Q92673 2214 aa7.8□□□□□ -1.16
TRERF1-205ENST00000541110 MYCNOSP40205 109 aa7.8□□□□□ -1.16
TRERF1-205ENST00000541110 CREBBPQ92793 2442 aa7.8□□□□□ -1.16
TRERF1-205ENST00000541110 DEFB131BA0A096LNP1 70 aa7.8□□□□□ -1.16
TRERF1-205ENST00000541110 INAFM1C9JVW0 142 aa7.8□□□□□ -1.16
TRERF1-205ENST00000541110 COX8AP10176 69 aa7.8□□□□□ -1.16
TRERF1-205ENST00000541110 Q8N9W7 124 aa7.8□□□□□ -1.16
TRERF1-205ENST00000541110 FXYD5Q96DB9 178 aa7.8□□□□□ -1.16
TRERF1-205ENST00000541110 NOTCH4Q99466 2003 aa7.8□□□□□ -1.16
TRERF1-205ENST00000541110 FOXI1Q12951 378 aa7.8□□□□□ -1.16
TRERF1-205ENST00000541110 IGHV2-70P01814 119 aa7.79□□□□□ -1.16
TRERF1-205ENST00000541110 RIF1Q5UIP0 2472 aaKnown RBP7.79□□□□□ -1.16
TRERF1-205ENST00000541110 DNAJC9-AS1A6NH13 148 aa7.79□□□□□ -1.16
TRERF1-205ENST00000541110 CFC1BP0CG36 223 aa7.79□□□□□ -1.16
TRERF1-205ENST00000541110 CFC1P0CG37 223 aa7.79□□□□□ -1.16
TRERF1-205ENST00000541110 A0A0B4J2C4 111 aa7.79□□□□□ -1.16
TRERF1-205ENST00000541110 RBAKDNA6NC62 111 aa7.79□□□□□ -1.16
TRERF1-205ENST00000541110 TMEM256-PLSCR3K7ERE1 68 aa7.79□□□□□ -1.16
TRERF1-205ENST00000541110 LTBP1Q14766 1721 aa7.79□□□□□ -1.16
TRERF1-205ENST00000541110 C12orf74Q32Q52 190 aa7.79□□□□□ -1.16
TRERF1-205ENST00000541110 LINC00311Q8N616 119 aa7.79□□□□□ -1.16
TRERF1-205ENST00000541110 H0YGX0 51 aa7.79□□□□□ -1.16
TRERF1-205ENST00000541110 CYTL1Q9NRR1 136 aa7.79□□□□□ -1.16
TRERF1-205ENST00000541110 COX7BP24311 80 aa7.79□□□□□ -1.16
TRERF1-205ENST00000541110 IGKV2D-26A0A0A0MRZ7 120 aa7.78□□□□□ -1.16
TRERF1-205ENST00000541110 UPK3BQ9BT76 320 aa7.78□□□□□ -1.16
TRERF1-205ENST00000541110 IGHV4-30-4P0DP06 118 aa7.78□□□□□ -1.16
TRERF1-205ENST00000541110 IGHV4-31P0DP07 118 aa7.78□□□□□ -1.16
TRERF1-205ENST00000541110 FAM19A5Q7Z5A7 132 aaPredicted RBP7.78□□□□□ -1.16
TRERF1-205ENST00000541110 PRR15LQ9BU68 103 aa7.78□□□□□ -1.16
TRERF1-205ENST00000541110 IGLC1P0CG04 106 aa7.78□□□□□ -1.16
TRERF1-205ENST00000541110 Q8N1Y9 231 aa7.78□□□□□ -1.16
TRERF1-205ENST00000541110 C11orf52Q96A22 123 aa7.78□□□□□ -1.16
TRERF1-205ENST00000541110 ATRXP46100 2492 aa7.78□□□□□ -1.16
TRERF1-205ENST00000541110 WI2-2373I1.2A0A1W2PRP0 233 aa7.78□□□□□ -1.16
TRERF1-205ENST00000541110 CCL25O15444 150 aa7.78□□□□□ -1.16
TRERF1-205ENST00000541110 ZNF491Q8N8L2 437 aa7.78□□□□□ -1.16
TRERF1-205ENST00000541110 K7EM74 188 aa7.77□□□□□ -1.16
TRERF1-205ENST00000541110 FAM231DQ6ZW35 169 aa7.77□□□□□ -1.16
TRERF1-205ENST00000541110 C5orf56Q8N8D9 126 aa7.77□□□□□ -1.16
TRERF1-205ENST00000541110 TEX49A0A1B0GTD5 131 aa7.77□□□□□ -1.17
TRERF1-205ENST00000541110 COLCA2A8K830 154 aa7.77□□□□□ -1.17
TRERF1-205ENST00000541110 LECT2O14960 151 aa7.77□□□□□ -1.17
TRERF1-205ENST00000541110 CXCL5P42830 114 aa7.77□□□□□ -1.17
TRERF1-205ENST00000541110 INSL3P51460 131 aa7.77□□□□□ -1.17
TRERF1-205ENST00000541110 NDUFA11Q86Y39 141 aa7.77□□□□□ -1.17
TRERF1-205ENST00000541110 BRK1Q8WUW1 75 aa7.77□□□□□ -1.17
TRERF1-205ENST00000541110 FAM236DA0A1B0GTK5 79 aa7.77□□□□□ -1.17
TRERF1-205ENST00000541110 FAM236CP0DP71 79 aa7.77□□□□□ -1.17
TRERF1-205ENST00000541110 UBE2D2P62837 147 aa7.77□□□□□ -1.17
TRERF1-205ENST00000541110 C17orf82Q86X59 251 aaPredicted RBP7.77□□□□□ -1.17
TRERF1-205ENST00000541110 LINC00269Q8N2A0 174 aa7.77□□□□□ -1.17
TRERF1-205ENST00000541110 GATA1P15976 413 aaPredicted RBP7.77□□□□□ -1.17
TRERF1-205ENST00000541110 ODF3L1Q8IXM7 274 aa7.77□□□□□ -1.17
TRERF1-205ENST00000541110 SERP1Q9Y6X1 66 aa7.77□□□□□ -1.17
TRERF1-205ENST00000541110 SIRPDQ9H106 197 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms