RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 PF4V1P10720 104 aa7.78□□□□□ -1.16
CDC42SE1-207ENST00000540998 RAB9AP51151 201 aa7.78□□□□□ -1.16
CDC42SE1-207ENST00000540998 C10orf99Q6UWK7 81 aa7.78□□□□□ -1.16
CDC42SE1-207ENST00000540998 ABCA12Q86UK0 2595 aa7.78□□□□□ -1.16
CDC42SE1-207ENST00000540998 PKD1L2Q7Z442 2459 aa7.78□□□□□ -1.16
CDC42SE1-207ENST00000540998 TRAV21A0A0B4J279 112 aa7.77□□□□□ -1.16
CDC42SE1-207ENST00000540998 COX6B1P14854 86 aa7.77□□□□□ -1.16
CDC42SE1-207ENST00000540998 FBXL19-AS1Q494R0 122 aa7.77□□□□□ -1.16
CDC42SE1-207ENST00000540998 AKAP9Q99996 3911 aa7.77□□□□□ -1.17
CDC42SE1-207ENST00000540998 TRAV12-1A0A0B4J245 112 aa7.77□□□□□ -1.17
CDC42SE1-207ENST00000540998 PRSS47A8MTI9 375 aa7.77□□□□□ -1.17
CDC42SE1-207ENST00000540998 OOSP1A8MZH6 123 aa7.77□□□□□ -1.17
CDC42SE1-207ENST00000540998 SOCS3O14543 225 aa7.77□□□□□ -1.17
CDC42SE1-207ENST00000540998 PRM2P04554 102 aa7.77□□□□□ -1.17
CDC42SE1-207ENST00000540998 ZNRF2Q8NHG8 242 aa7.77□□□□□ -1.17
CDC42SE1-207ENST00000540998 RAX2Q96IS3 184 aa7.77□□□□□ -1.17
CDC42SE1-207ENST00000540998 JMJD1CQ15652 2540 aa7.77□□□□□ -1.17
CDC42SE1-207ENST00000540998 ADARB2-AS1A8MUL3 147 aa7.77□□□□□ -1.17
CDC42SE1-207ENST00000540998 C19orf84I3L1E1 186 aa7.77□□□□□ -1.17
CDC42SE1-207ENST00000540998 MT-ATP8P03928 68 aa7.77□□□□□ -1.17
CDC42SE1-207ENST00000540998 LY6DQ14210 128 aa7.77□□□□□ -1.17
CDC42SE1-207ENST00000540998 SUMO4Q6EEV6 95 aa7.77□□□□□ -1.17
CDC42SE1-207ENST00000540998 C1orf122Q6ZSJ8 110 aa7.77□□□□□ -1.17
CDC42SE1-207ENST00000540998 C9orf139Q6ZV77 190 aa7.77□□□□□ -1.17
CDC42SE1-207ENST00000540998 EPG5Q9HCE0 2579 aa7.76□□□□□ -1.17
CDC42SE1-207ENST00000540998 ACACBO00763 2458 aa7.76□□□□□ -1.17
CDC42SE1-207ENST00000540998 PTPN13Q12923 2485 aa7.76□□□□□ -1.17
CDC42SE1-207ENST00000540998 LINC00315P59091 139 aa7.76□□□□□ -1.17
CDC42SE1-207ENST00000540998 RHPN1-AS1Q9BWJ2 59 aa7.76□□□□□ -1.17
CDC42SE1-207ENST00000540998 KLK9Q9UKQ9 250 aa7.76□□□□□ -1.17
CDC42SE1-207ENST00000540998 SONP18583 2426 aaKnown RBP7.76□□□□□ -1.17
CDC42SE1-207ENST00000540998 CD7P09564 240 aa7.76□□□□□ -1.17
CDC42SE1-207ENST00000540998 TAL2Q16559 108 aa7.76□□□□□ -1.17
CDC42SE1-207ENST00000540998 CFAP126Q5VTH2 177 aa7.76□□□□□ -1.17
CDC42SE1-207ENST00000540998 CHD6Q8TD26 2715 aa7.76□□□□□ -1.17
CDC42SE1-207ENST00000540998 TCL1BO95988 128 aa7.75□□□□□ -1.17
CDC42SE1-207ENST00000540998 HTN1P15515 57 aa7.75□□□□□ -1.17
CDC42SE1-207ENST00000540998 RNASE13Q5GAN3 156 aaKnown RBP7.75□□□□□ -1.17
CDC42SE1-207ENST00000540998 HIST2H2BDQ6DRA6 164 aa7.75□□□□□ -1.17
CDC42SE1-207ENST00000540998 MDFICQ9P1T7 246 aa7.75□□□□□ -1.17
CDC42SE1-207ENST00000540998 A0A0J9YY99 117 aa7.75□□□□□ -1.17
CDC42SE1-207ENST00000540998 CRIP2P52943 208 aaPredicted RBP7.75□□□□□ -1.17
CDC42SE1-207ENST00000540998 FOXI1Q12951 378 aa7.75□□□□□ -1.17
CDC42SE1-207ENST00000540998 CARD19Q96LW7 228 aa7.75□□□□□ -1.17
CDC42SE1-207ENST00000540998 SPATA25Q9BR10 227 aa7.75□□□□□ -1.17
CDC42SE1-207ENST00000540998 CDIP1Q9H305 208 aa7.75□□□□□ -1.17
CDC42SE1-207ENST00000540998 IGHV3-73A0A0B4J1V6 119 aa7.75□□□□□ -1.17
CDC42SE1-207ENST00000540998 EIF4EBP3O60516 100 aaPredicted RBP7.75□□□□□ -1.17
CDC42SE1-207ENST00000540998 ZNF688P0C7X2 276 aa7.75□□□□□ -1.17
CDC42SE1-207ENST00000540998 MRPL53Q96EL3 112 aaKnown RBP7.75□□□□□ -1.17
CDC42SE1-207ENST00000540998 SDHAF1A6NFY7 115 aa7.74□□□□□ -1.17
CDC42SE1-207ENST00000540998 H3BUX3 64 aa7.74□□□□□ -1.17
CDC42SE1-207ENST00000540998 KIF25-AS1Q9Y6Z4 181 aa7.74□□□□□ -1.17
CDC42SE1-207ENST00000540998 CFC1BP0CG36 223 aa7.74□□□□□ -1.17
CDC42SE1-207ENST00000540998 CFC1P0CG37 223 aa7.74□□□□□ -1.17
CDC42SE1-207ENST00000540998 UBE2D1P51668 147 aa7.74□□□□□ -1.17
CDC42SE1-207ENST00000540998 XGP55808 180 aa7.74□□□□□ -1.17
CDC42SE1-207ENST00000540998 TRPT1Q86TN4 253 aaKnown RBP7.74□□□□□ -1.17
CDC42SE1-207ENST00000540998 DLX4Q92988 240 aaPredicted RBP7.74□□□□□ -1.17
CDC42SE1-207ENST00000540998 DUX5Q96PT3 197 aa7.74□□□□□ -1.17
CDC42SE1-207ENST00000540998 MOB4Q9Y3A3 225 aa7.74□□□□□ -1.17
CDC42SE1-207ENST00000540998 LRRK2Q5S007 2527 aa7.74□□□□□ -1.17
CDC42SE1-207ENST00000540998 IGIPA6NJ69 53 aa7.73□□□□□ -1.17
CDC42SE1-207ENST00000540998 ELANEP08246 267 aa7.73□□□□□ -1.17
CDC42SE1-207ENST00000540998 NDUFA11Q86Y39 141 aa7.73□□□□□ -1.17
CDC42SE1-207ENST00000540998 TEX15Q9BXT5 2789 aa7.73□□□□□ -1.17
CDC42SE1-207ENST00000540998 J3QR89 54 aa7.73□□□□□ -1.17
CDC42SE1-207ENST00000540998 P0DMU3 169 aa7.73□□□□□ -1.17
CDC42SE1-207ENST00000540998 FAM231AP0DMU4 169 aa7.73□□□□□ -1.17
CDC42SE1-207ENST00000540998 FAM231CP0DMU5 169 aa7.73□□□□□ -1.17
CDC42SE1-207ENST00000540998 CEMP1Q6PRD7 247 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE1-207ENST00000540998 ATP6V0BQ99437 205 aa7.73□□□□□ -1.17
CDC42SE1-207ENST00000540998 C1QTNF4Q9BXJ3 329 aa7.73□□□□□ -1.17
CDC42SE1-207ENST00000540998 Q9UF83 564 aa7.73□□□□□ -1.17
CDC42SE1-207ENST00000540998 IGHV4-61A0A0C4DH41 118 aa7.73□□□□□ -1.17
CDC42SE1-207ENST00000540998 CKS1BP61024 79 aa7.73□□□□□ -1.17
CDC42SE1-207ENST00000540998 BEX4Q9NWD9 120 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE1-207ENST00000540998 ANKRD17O75179 2603 aaKnown RBP7.73□□□□□ -1.17
CDC42SE1-207ENST00000540998 PRRC2AP48634 2157 aaKnown RBP7.72□□□□□ -1.17
CDC42SE1-207ENST00000540998 NPC2P61916 151 aa7.72□□□□□ -1.17
CDC42SE1-207ENST00000540998 ZNF56Q15929 161 aa7.72□□□□□ -1.17
CDC42SE1-207ENST00000540998 C19orf54Q5BKX5 351 aa7.72□□□□□ -1.17
CDC42SE1-207ENST00000540998 PSMG4Q5JS54 123 aa7.72□□□□□ -1.17
CDC42SE1-207ENST00000540998 FAM159AQ6UWV7 190 aa7.72□□□□□ -1.17
CDC42SE1-207ENST00000540998 TRAV2A0A0B4J234 112 aa7.72□□□□□ -1.17
CDC42SE1-207ENST00000540998 CIDEAO60543 219 aa7.72□□□□□ -1.17
CDC42SE1-207ENST00000540998 IGHV4-39P01824 125 aa7.72□□□□□ -1.17
CDC42SE1-207ENST00000540998 SCGB1C2P0DMR2 95 aa7.72□□□□□ -1.17
CDC42SE1-207ENST00000540998 A8MZ25 164 aa7.71□□□□□ -1.17
CDC42SE1-207ENST00000540998 OVOL1O14753 267 aa7.71□□□□□ -1.17
CDC42SE1-207ENST00000540998 SPINK8P0C7L1 97 aa7.71□□□□□ -1.17
CDC42SE1-207ENST00000540998 GATA3P23771 443 aa7.71□□□□□ -1.17
CDC42SE1-207ENST00000540998 PROK1P58294 105 aa7.71□□□□□ -1.17
CDC42SE1-207ENST00000540998 SPINK13Q1W4C9 94 aa7.71□□□□□ -1.17
CDC42SE1-207ENST00000540998 Q6ZSV7 163 aa7.71□□□□□ -1.17
CDC42SE1-207ENST00000540998 TRAV26-1A0A087WT03 109 aa7.71□□□□□ -1.18
CDC42SE1-207ENST00000540998 IGHV3-30P01768 117 aa7.71□□□□□ -1.18
CDC42SE1-207ENST00000540998 IGHV3-30-5P0DP03 117 aa7.71□□□□□ -1.18
CDC42SE1-207ENST00000540998 POLR2KP53803 58 aaKnown RBP7.71□□□□□ -1.18
CDC42SE1-207ENST00000540998 PMVKQ15126 192 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms