RNA–Protein interactions for RNA: ENST00000540590.1

LMO3-223, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-223ENST00000540590 ZNF876PQ49A33 203 aa8.94□□□□□ -0.98
LMO3-223ENST00000540590 TENM3Q9P273 2699 aa8.93□□□□□ -0.98
LMO3-223ENST00000540590 TRGV1A0A0A0MS02 117 aa8.93□□□□□ -0.98
LMO3-223ENST00000540590 RHODO00212 210 aa8.93□□□□□ -0.98
LMO3-223ENST00000540590 TMEM136Q6ZRR5 245 aa8.93□□□□□ -0.98
LMO3-223ENST00000540590 Q6ZTI0 123 aa8.93□□□□□ -0.98
LMO3-223ENST00000540590 LINC00612Q8N6U2 182 aa8.93□□□□□ -0.98
LMO3-223ENST00000540590 GNB1LQ9BYB4 327 aa8.93□□□□□ -0.98
LMO3-223ENST00000540590 TMEM191AQ9H0A3 160 aa8.93□□□□□ -0.98
LMO3-223ENST00000540590 JPT2Q9H910 190 aa8.93□□□□□ -0.98
LMO3-223ENST00000540590 HLA-DQA1P01909 254 aa8.92□□□□□ -0.98
LMO3-223ENST00000540590 RAB5AP20339 215 aa8.92□□□□□ -0.98
LMO3-223ENST00000540590 RAB4BP61018 213 aa8.92□□□□□ -0.98
LMO3-223ENST00000540590 ZFP2Q6ZN57 461 aa8.92□□□□□ -0.98
LMO3-223ENST00000540590 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.92□□□□□ -0.98
LMO3-223ENST00000540590 MEGF8Q7Z7M0 2845 aa8.91□□□□□ -0.98
LMO3-223ENST00000540590 KRTAP9-6A0A140TA67 174 aa8.91□□□□□ -0.98
LMO3-223ENST00000540590 GAGE12BA1L429 117 aa8.91□□□□□ -0.98
LMO3-223ENST00000540590 GAGE7O76087 117 aa8.91□□□□□ -0.98
LMO3-223ENST00000540590 GAGE12FP0CL80 117 aa8.91□□□□□ -0.98
LMO3-223ENST00000540590 GAGE12GP0CL81 117 aa8.91□□□□□ -0.98
LMO3-223ENST00000540590 GAGE12IP0CL82 117 aa8.91□□□□□ -0.98
LMO3-223ENST00000540590 SPART-AS1P0CW21 52 aa8.91□□□□□ -0.98
LMO3-223ENST00000540590 SMIM17P0DL12 118 aa8.91□□□□□ -0.98
LMO3-223ENST00000540590 EVI2AP22794 236 aa8.91□□□□□ -0.98
LMO3-223ENST00000540590 FAM222AQ5U5X8 452 aa8.91□□□□□ -0.98
LMO3-223ENST00000540590 TRAV4A0A0B4J268 109 aa8.9□□□□□ -0.98
LMO3-223ENST00000540590 RS1O15537 224 aa8.9□□□□□ -0.98
LMO3-223ENST00000540590 RPS10P46783 165 aaKnown RBP8.9□□□□□ -0.98
LMO3-223ENST00000540590 C14orf178Q8N769 122 aaPredicted RBP8.9□□□□□ -0.98
LMO3-223ENST00000540590 SAMD10Q9BYL1 202 aa8.9□□□□□ -0.98
LMO3-223ENST00000540590 DPH3P1Q9H4G8 78 aa8.9□□□□□ -0.98
LMO3-223ENST00000540590 DKK2Q9UBU2 259 aa8.9□□□□□ -0.98
LMO3-223ENST00000540590 CELA1Q9UNI1 258 aa8.9□□□□□ -0.98
LMO3-223ENST00000540590 KIF25-AS1Q9Y6Z4 181 aa8.9□□□□□ -0.98
LMO3-223ENST00000540590 A0A087WWL8 130 aa8.89□□□□□ -0.99
LMO3-223ENST00000540590 PPP1R17O96001 155 aa8.89□□□□□ -0.99
LMO3-223ENST00000540590 PPBPP02775 128 aa8.89□□□□□ -0.99
LMO3-223ENST00000540590 CRYGDP07320 174 aa8.89□□□□□ -0.99
LMO3-223ENST00000540590 SLAQ13239 276 aa8.89□□□□□ -0.99
LMO3-223ENST00000540590 CFAP126Q5VTH2 177 aa8.89□□□□□ -0.99
LMO3-223ENST00000540590 AMN1Q8IY45 258 aa8.89□□□□□ -0.99
LMO3-223ENST00000540590 POM121L12Q8N7R1 296 aa8.89□□□□□ -0.99
LMO3-223ENST00000540590 EDA2RQ9HAV5 297 aa8.89□□□□□ -0.99
LMO3-223ENST00000540590 A0A0J9YWU9 116 aa8.88□□□□□ -0.99
LMO3-223ENST00000540590 DEFB130BP0DP73 79 aa8.88□□□□□ -0.99
LMO3-223ENST00000540590 DEFB130AP0DP74 79 aa8.88□□□□□ -0.99
LMO3-223ENST00000540590 LINC00315P59091 139 aa8.88□□□□□ -0.99
LMO3-223ENST00000540590 FAM74A4Q5TZK3 123 aa8.88□□□□□ -0.99
LMO3-223ENST00000540590 FAM104BQ5XKR9 115 aa8.88□□□□□ -0.99
LMO3-223ENST00000540590 RNF185Q96GF1 192 aa8.88□□□□□ -0.99
LMO3-223ENST00000540590 MRPL18Q9H0U6 180 aaKnown RBP8.88□□□□□ -0.99
LMO3-223ENST00000540590 TRAPPC1Q9Y5R8 145 aa8.88□□□□□ -0.99
LMO3-223ENST00000540590 TRGV2A0A075B6R0 118 aa8.87□□□□□ -0.99
LMO3-223ENST00000540590 H7C1H1 209 aa8.87□□□□□ -0.99
LMO3-223ENST00000540590 MGPP08493 103 aa8.87□□□□□ -0.99
LMO3-223ENST00000540590 RAB4AP20338 218 aa8.87□□□□□ -0.99
LMO3-223ENST00000540590 FABP9Q0Z7S8 132 aa8.87□□□□□ -0.99
LMO3-223ENST00000540590 UFSP1Q6NVU6 142 aa8.87□□□□□ -0.99
LMO3-223ENST00000540590 OR4C5Q8NGB2 326 aa8.87□□□□□ -0.99
LMO3-223ENST00000540590 MRAP2Q96G30 205 aa8.87□□□□□ -0.99
LMO3-223ENST00000540590 LAMTOR2Q9Y2Q5 125 aa8.87□□□□□ -0.99
LMO3-223ENST00000540590 IGHV3-73A0A0B4J1V6 119 aa8.86□□□□□ -0.99
LMO3-223ENST00000540590 IGHV3-53P01767 116 aa8.86□□□□□ -0.99
LMO3-223ENST00000540590 APCSP02743 223 aa8.86□□□□□ -0.99
LMO3-223ENST00000540590 TRGC2P03986 189 aa8.86□□□□□ -0.99
LMO3-223ENST00000540590 DAD1P61803 113 aa8.86□□□□□ -0.99
LMO3-223ENST00000540590 KIAA1644Q3SXP7 199 aa8.86□□□□□ -0.99
LMO3-223ENST00000540590 MRPL51Q4U2R6 128 aaKnown RBP8.86□□□□□ -0.99
LMO3-223ENST00000540590 ZNF479Q96JC4 524 aa8.86□□□□□ -0.99
LMO3-223ENST00000540590 PHOX2AO14813 284 aa8.85□□□□□ -0.99
LMO3-223ENST00000540590 ZNF56Q15929 161 aa8.85□□□□□ -0.99
LMO3-223ENST00000540590 TRAV26-2A0A0B4J265 109 aa8.84□□□□□ -0.99
LMO3-223ENST00000540590 TRBV10-1A0A0K0K1A3 114 aa8.84□□□□□ -0.99
LMO3-223ENST00000540590 F5H697 171 aa8.84□□□□□ -0.99
LMO3-223ENST00000540590 SMKR1H3BMG3 65 aa8.84□□□□□ -0.99
LMO3-223ENST00000540590 GAS8-AS1O95177 125 aa8.84□□□□□ -0.99
LMO3-223ENST00000540590 ATP5G1P05496 136 aa8.84□□□□□ -0.99
LMO3-223ENST00000540590 C12orf74Q32Q52 190 aa8.84□□□□□ -0.99
LMO3-223ENST00000540590 TRBV6-4A0A1B0GX49 114 aa8.83□□□□□ -1
LMO3-223ENST00000540590 NCR2O95944 276 aa8.83□□□□□ -1
LMO3-223ENST00000540590 SUMO4Q6EEV6 95 aa8.83□□□□□ -1
LMO3-223ENST00000540590 Q6ZSN1 163 aa8.83□□□□□ -1
LMO3-223ENST00000540590 ORMDL3Q8N138 153 aa8.83□□□□□ -1
LMO3-223ENST00000540590 U3KQK5 164 aa8.83□□□□□ -1
LMO3-223ENST00000540590 STAB2Q8WWQ8 2551 aa8.82□□□□□ -1
LMO3-223ENST00000540590 D6R8Y8 96 aa8.82□□□□□ -1
LMO3-223ENST00000540590 GATA1P15976 413 aaPredicted RBP8.82□□□□□ -1
LMO3-223ENST00000540590 CKS2P33552 79 aa8.82□□□□□ -1
LMO3-223ENST00000540590 FHL2Q14192 279 aa8.82□□□□□ -1
LMO3-223ENST00000540590 C11orf45Q8TAV5 145 aa8.82□□□□□ -1
LMO3-223ENST00000540590 DNAJC30Q96LL9 226 aa8.82□□□□□ -1
LMO3-223ENST00000540590 PRKDCP78527 4128 aaKnown RBP8.82□□□□□ -1
LMO3-223ENST00000540590 DNAH9Q9NYC9 4486 aa8.82□□□□□ -1
LMO3-223ENST00000540590 TRGV4A0A0C4DH28 118 aa8.81□□□□□ -1
LMO3-223ENST00000540590 H3BNG1 76 aa8.81□□□□□ -1
LMO3-223ENST00000540590 HOXA5P20719 270 aa8.81□□□□□ -1
LMO3-223ENST00000540590 SRIP30626 198 aa8.81□□□□□ -1
LMO3-223ENST00000540590 NANOS2P60321 138 aaKnown RBP8.81□□□□□ -1
LMO3-223ENST00000540590 RHOHQ15669 191 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms