RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 A0A087WX48 190 aa7.85□□□□□ -1.15
CBX3P4-202ENST00000540428 KRBOX1C9JBD0 128 aa7.85□□□□□ -1.15
CBX3P4-202ENST00000540428 PEX7O00628 323 aa7.85□□□□□ -1.15
CBX3P4-202ENST00000540428 OXTP01178 125 aa7.85□□□□□ -1.15
CBX3P4-202ENST00000540428 IFNA7P01567 189 aa7.85□□□□□ -1.15
CBX3P4-202ENST00000540428 ARMS2P0C7Q2 107 aa7.85□□□□□ -1.15
CBX3P4-202ENST00000540428 Q0VG73 95 aa7.85□□□□□ -1.15
CBX3P4-202ENST00000540428 LINC01620Q4KN68 170 aa7.85□□□□□ -1.15
CBX3P4-202ENST00000540428 C14orf177Q52M58 125 aa7.85□□□□□ -1.15
CBX3P4-202ENST00000540428 FAM74A4Q5TZK3 123 aa7.85□□□□□ -1.15
CBX3P4-202ENST00000540428 KCNIP4Q6PIL6 250 aa7.85□□□□□ -1.15
CBX3P4-202ENST00000540428 Q86TA4 180 aa7.85□□□□□ -1.15
CBX3P4-202ENST00000540428 ZFP30Q9Y2G7 519 aa7.85□□□□□ -1.15
CBX3P4-202ENST00000540428 CTXND1A0A1B0GTU2 59 aa7.84□□□□□ -1.15
CBX3P4-202ENST00000540428 IGLV2-8P01709 118 aa7.84□□□□□ -1.15
CBX3P4-202ENST00000540428 CRIP1P50238 77 aa7.84□□□□□ -1.15
CBX3P4-202ENST00000540428 RPL36AP83881 106 aaKnown RBP7.84□□□□□ -1.15
CBX3P4-202ENST00000540428 CIRBP-AS1Q8TBR5 109 aa7.84□□□□□ -1.15
CBX3P4-202ENST00000540428 RPL36ALQ969Q0 106 aaKnown RBP7.84□□□□□ -1.15
CBX3P4-202ENST00000540428 UBE2WQ96B02 151 aa7.84□□□□□ -1.15
CBX3P4-202ENST00000540428 ZC2HC1AQ96GY0 325 aa7.84□□□□□ -1.15
CBX3P4-202ENST00000540428 PHLDA3Q9Y5J5 127 aa7.84□□□□□ -1.15
CBX3P4-202ENST00000540428 ALG5Q9Y673 324 aa7.84□□□□□ -1.15
CBX3P4-202ENST00000540428 A6NHS1 94 aa7.83□□□□□ -1.16
CBX3P4-202ENST00000540428 FAM74A7A6NL05 159 aa7.83□□□□□ -1.16
CBX3P4-202ENST00000540428 M0R036 132 aa7.83□□□□□ -1.16
CBX3P4-202ENST00000540428 SH2D1AO60880 128 aa7.83□□□□□ -1.16
CBX3P4-202ENST00000540428 TPT1P13693 172 aaKnown RBP7.83□□□□□ -1.16
CBX3P4-202ENST00000540428 UBE2D3P61077 147 aa7.83□□□□□ -1.16
CBX3P4-202ENST00000540428 UBE2D2P62837 147 aa7.83□□□□□ -1.16
CBX3P4-202ENST00000540428 ZNF726P1Q15940 193 aa7.83□□□□□ -1.16
CBX3P4-202ENST00000540428 LINC01559Q495D7 138 aa7.83□□□□□ -1.16
CBX3P4-202ENST00000540428 FAM162BQ5T6X4 162 aa7.83□□□□□ -1.16
CBX3P4-202ENST00000540428 ZFP82Q8N141 532 aa7.83□□□□□ -1.16
CBX3P4-202ENST00000540428 DNAJC30Q96LL9 226 aa7.83□□□□□ -1.16
CBX3P4-202ENST00000540428 TRBV7-3A0A075B6L6 115 aa7.82□□□□□ -1.16
CBX3P4-202ENST00000540428 A0A087WWL8 130 aa7.82□□□□□ -1.16
CBX3P4-202ENST00000540428 BORCS7-ASMTA0A0B4J1R7 106 aa7.82□□□□□ -1.16
CBX3P4-202ENST00000540428 TRBV6-1A0A0K0K1D8 114 aa7.82□□□□□ -1.16
CBX3P4-202ENST00000540428 GRIFINA4D1Z8 144 aa7.82□□□□□ -1.16
CBX3P4-202ENST00000540428 UBE2G2P60604 165 aa7.82□□□□□ -1.16
CBX3P4-202ENST00000540428 OR10G8Q8NGN5 311 aa7.82□□□□□ -1.16
CBX3P4-202ENST00000540428 FMC1Q96HJ9 113 aa7.82□□□□□ -1.16
CBX3P4-202ENST00000540428 TCEAL7Q9BRU2 100 aa7.82□□□□□ -1.16
CBX3P4-202ENST00000540428 C1orf43Q9BWL3 253 aa7.82□□□□□ -1.16
CBX3P4-202ENST00000540428 M0R381 172 aa7.81□□□□□ -1.16
CBX3P4-202ENST00000540428 UBE2G1P62253 170 aa7.81□□□□□ -1.16
CBX3P4-202ENST00000540428 ZNF674Q2M3X9 581 aa7.81□□□□□ -1.16
CBX3P4-202ENST00000540428 RPL7L1Q6DKI1 246 aaKnown RBP7.81□□□□□ -1.16
CBX3P4-202ENST00000540428 INO80EQ8NBZ0 244 aaPredicted RBP7.81□□□□□ -1.16
CBX3P4-202ENST00000540428 MED28Q9H204 178 aa7.81□□□□□ -1.16
CBX3P4-202ENST00000540428 TRBV6-8A0A0A6YYG3 113 aa7.8□□□□□ -1.16
CBX3P4-202ENST00000540428 CRPP02741 224 aa7.8□□□□□ -1.16
CBX3P4-202ENST00000540428 PKIAP61925 76 aa7.8□□□□□ -1.16
CBX3P4-202ENST00000540428 ENHOQ6UWT2 76 aa7.8□□□□□ -1.16
CBX3P4-202ENST00000540428 LRP1Q07954 4544 aaKnown RBP7.79□□□□□ -1.16
CBX3P4-202ENST00000540428 TMEM262E9PQX1 116 aa7.79□□□□□ -1.16
CBX3P4-202ENST00000540428 LTAP01374 205 aa7.79□□□□□ -1.16
CBX3P4-202ENST00000540428 GIPP09681 153 aaPredicted RBP7.79□□□□□ -1.16
CBX3P4-202ENST00000540428 FHITP49789 147 aa7.79□□□□□ -1.16
CBX3P4-202ENST00000540428 RAB4BP61018 213 aa7.79□□□□□ -1.16
CBX3P4-202ENST00000540428 Q5BKY6 102 aa7.79□□□□□ -1.16
CBX3P4-202ENST00000540428 AKR1C8PQ5T2L2 129 aa7.79□□□□□ -1.16
CBX3P4-202ENST00000540428 HMCN2Q8NDA2 5059 aa7.79□□□□□ -1.16
CBX3P4-202ENST00000540428 TMSB15BA0A087X1C1 80 aa7.78□□□□□ -1.16
CBX3P4-202ENST00000540428 CXCL1P09341 107 aa7.78□□□□□ -1.16
CBX3P4-202ENST00000540428 MIAQ16674 131 aa7.78□□□□□ -1.16
CBX3P4-202ENST00000540428 DGAT2L7PQ6IED9 249 aa7.78□□□□□ -1.16
CBX3P4-202ENST00000540428 PRR27Q6MZM9 219 aa7.78□□□□□ -1.16
CBX3P4-202ENST00000540428 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.78□□□□□ -1.16
CBX3P4-202ENST00000540428 MAP1LC3B2A6NCE7 125 aa7.77□□□□□ -1.17
CBX3P4-202ENST00000540428 PTTG1O95997 202 aa7.77□□□□□ -1.17
CBX3P4-202ENST00000540428 ANGP03950 147 aaKnown RBP7.77□□□□□ -1.17
CBX3P4-202ENST00000540428 RPL37AP61513 92 aaKnown RBP7.77□□□□□ -1.17
CBX3P4-202ENST00000540428 MPV17L2Q567V2 206 aa7.77□□□□□ -1.17
CBX3P4-202ENST00000540428 TMEM97Q5BJF2 176 aa7.77□□□□□ -1.17
CBX3P4-202ENST00000540428 C15orf54Q8N8G6 183 aa7.77□□□□□ -1.17
CBX3P4-202ENST00000540428 NEXN-AS1Q8NBZ9 246 aa7.77□□□□□ -1.17
CBX3P4-202ENST00000540428 MAP1LC3BQ9GZQ8 125 aa7.77□□□□□ -1.17
CBX3P4-202ENST00000540428 BATF3Q9NR55 127 aa7.77□□□□□ -1.17
CBX3P4-202ENST00000540428 FXYD6-FXYD2A0A087WZ82 144 aa7.76□□□□□ -1.17
CBX3P4-202ENST00000540428 USP17L23D6RBM5 183 aa7.76□□□□□ -1.17
CBX3P4-202ENST00000540428 AKR1C3P42330 323 aa7.76□□□□□ -1.17
CBX3P4-202ENST00000540428 ZNF56Q15929 161 aa7.76□□□□□ -1.17
CBX3P4-202ENST00000540428 C9orf163Q8N9P6 203 aa7.76□□□□□ -1.17
CBX3P4-202ENST00000540428 STOML3Q8TAV4 291 aa7.76□□□□□ -1.17
CBX3P4-202ENST00000540428 PLA2G2DQ9UNK4 145 aa7.76□□□□□ -1.17
CBX3P4-202ENST00000540428 FAT3Q8TDW7 4589 aa7.75□□□□□ -1.17
CBX3P4-202ENST00000540428 SNAI2O43623 268 aa7.75□□□□□ -1.17
CBX3P4-202ENST00000540428 HLA-DQA1P01909 254 aa7.75□□□□□ -1.17
CBX3P4-202ENST00000540428 S100A9P06702 114 aaKnown RBP7.75□□□□□ -1.17
CBX3P4-202ENST00000540428 CST9LP1Q5W188 147 aa7.75□□□□□ -1.17
CBX3P4-202ENST00000540428 CHCHD5Q9BSY4 110 aa7.75□□□□□ -1.17
CBX3P4-202ENST00000540428 SSBP4Q9BWG4 385 aaPredicted RBP7.75□□□□□ -1.17
CBX3P4-202ENST00000540428 ZNF471Q9BX82 626 aaPredicted RBP7.75□□□□□ -1.17
CBX3P4-202ENST00000540428 PRR34Q9NV39 138 aa7.75□□□□□ -1.17
CBX3P4-202ENST00000540428 PRSS1P07477 247 aa7.74□□□□□ -1.17
CBX3P4-202ENST00000540428 OR5AL1P0C617 328 aa7.74□□□□□ -1.17
CBX3P4-202ENST00000540428 RPL19P84098 196 aaKnown RBP7.74□□□□□ -1.17
CBX3P4-202ENST00000540428 OR10AG1Q8NH19 301 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms