RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 COPS9Q8WXC6 57 aa8.47□□□□□ -1.05
PBX1-212ENST00000540236 MDFICQ9P1T7 246 aa8.47□□□□□ -1.05
PBX1-212ENST00000540236 RPL36AP83881 106 aaKnown RBP8.47□□□□□ -1.05
PBX1-212ENST00000540236 TMEM61Q8N0U2 210 aa8.47□□□□□ -1.05
PBX1-212ENST00000540236 PRSS33Q8NF86 280 aa8.47□□□□□ -1.05
PBX1-212ENST00000540236 RPL36ALQ969Q0 106 aaKnown RBP8.47□□□□□ -1.05
PBX1-212ENST00000540236 Q6Q795 121 aa8.47□□□□□ -1.05
PBX1-212ENST00000540236 SCXQ7RTU7 201 aa8.46□□□□□ -1.05
PBX1-212ENST00000540236 LY6G5BQ8NDX9 201 aa8.46□□□□□ -1.05
PBX1-212ENST00000540236 SVILO95425 2214 aa8.46□□□□□ -1.06
PBX1-212ENST00000540236 ZNF883P0CG24 379 aa8.46□□□□□ -1.06
PBX1-212ENST00000540236 PSMB8P28062 276 aa8.46□□□□□ -1.06
PBX1-212ENST00000540236 THBDP07204 575 aa8.46□□□□□ -1.06
PBX1-212ENST00000540236 I3L2K1 104 aa8.46□□□□□ -1.06
PBX1-212ENST00000540236 IGHG2P01859 326 aa8.46□□□□□ -1.06
PBX1-212ENST00000540236 ZMAT4Q9H898 229 aa8.46□□□□□ -1.06
PBX1-212ENST00000540236 IGKV1-17P01599 117 aa8.45□□□□□ -1.06
PBX1-212ENST00000540236 TIRAPP58753 221 aa8.45□□□□□ -1.06
PBX1-212ENST00000540236 ZNRF2Q8NHG8 242 aa8.45□□□□□ -1.06
PBX1-212ENST00000540236 SAP25Q8TEE9 199 aa8.45□□□□□ -1.06
PBX1-212ENST00000540236 CEP192Q8TEP8 1941 aa8.45□□□□□ -1.06
PBX1-212ENST00000540236 P0DMU3 169 aa8.44□□□□□ -1.06
PBX1-212ENST00000540236 FAM231AP0DMU4 169 aa8.44□□□□□ -1.06
PBX1-212ENST00000540236 FAM231CP0DMU5 169 aa8.44□□□□□ -1.06
PBX1-212ENST00000540236 TMEM258P61165 79 aa8.44□□□□□ -1.06
PBX1-212ENST00000540236 PAX8Q06710 450 aa8.44□□□□□ -1.06
PBX1-212ENST00000540236 H3BT86 120 aa8.44□□□□□ -1.06
PBX1-212ENST00000540236 HILS1P60008 231 aa8.44□□□□□ -1.06
PBX1-212ENST00000540236 PDE6HQ13956 83 aa8.44□□□□□ -1.06
PBX1-212ENST00000540236 TET2Q6N021 2002 aaPredicted RBP8.44□□□□□ -1.06
PBX1-212ENST00000540236 G3V318 75 aa8.44□□□□□ -1.06
PBX1-212ENST00000540236 ZGRF1Q86YA3 2104 aa8.44□□□□□ -1.06
PBX1-212ENST00000540236 MALP21145 153 aa8.43□□□□□ -1.06
PBX1-212ENST00000540236 DPH3Q96FX2 82 aa8.43□□□□□ -1.06
PBX1-212ENST00000540236 IGHV3-30-3P0DP02 117 aa8.43□□□□□ -1.06
PBX1-212ENST00000540236 NRACQ8N912 160 aa8.43□□□□□ -1.06
PBX1-212ENST00000540236 RPL18AQ02543 176 aaKnown RBP8.43□□□□□ -1.06
PBX1-212ENST00000540236 FAM19A4Q96LR4 140 aa8.43□□□□□ -1.06
PBX1-212ENST00000540236 NBL1P41271 181 aa8.43□□□□□ -1.06
PBX1-212ENST00000540236 ICE1Q9Y2F5 2266 aa8.43□□□□□ -1.06
PBX1-212ENST00000540236 ZNF71Q9NQZ8 489 aaPredicted RBP8.43□□□□□ -1.06
PBX1-212ENST00000540236 TRBV7-1A0A0A6YYK4 115 aa8.42□□□□□ -1.06
PBX1-212ENST00000540236 C5orf67F2Z3F1 127 aa8.42□□□□□ -1.06
PBX1-212ENST00000540236 PYGO1Q9Y3Y4 419 aa8.42□□□□□ -1.06
PBX1-212ENST00000540236 TIMM17BO60830 172 aa8.42□□□□□ -1.06
PBX1-212ENST00000540236 C11orf21Q9P2W6 132 aa8.42□□□□□ -1.06
PBX1-212ENST00000540236 C17orf100A8MU93 164 aa8.42□□□□□ -1.06
PBX1-212ENST00000540236 K7EIM0 57 aa8.42□□□□□ -1.06
PBX1-212ENST00000540236 UPK3BQ9BT76 320 aa8.42□□□□□ -1.06
PBX1-212ENST00000540236 FAM223BA6NKX1 122 aa8.42□□□□□ -1.06
PBX1-212ENST00000540236 UBE2D1P51668 147 aa8.42□□□□□ -1.06
PBX1-212ENST00000540236 ORMDL1Q9P0S3 153 aa8.42□□□□□ -1.06
PBX1-212ENST00000540236 DPM3Q9P2X0 92 aa8.42□□□□□ -1.06
PBX1-212ENST00000540236 USP17L23D6RBM5 183 aa8.41□□□□□ -1.06
PBX1-212ENST00000540236 LECT2O14960 151 aa8.41□□□□□ -1.06
PBX1-212ENST00000540236 SPINK13Q1W4C9 94 aa8.41□□□□□ -1.06
PBX1-212ENST00000540236 TMEM223A0PJW6 202 aa8.41□□□□□ -1.06
PBX1-212ENST00000540236 SERP2Q8N6R1 65 aa8.41□□□□□ -1.06
PBX1-212ENST00000540236 SPTSSBQ8NFR3 76 aa8.41□□□□□ -1.06
PBX1-212ENST00000540236 LINC01560Q8TB33 94 aa8.41□□□□□ -1.06
PBX1-212ENST00000540236 Q6ZS92 163 aa8.41□□□□□ -1.06
PBX1-212ENST00000540236 OVOL1O14753 267 aa8.4□□□□□ -1.06
PBX1-212ENST00000540236 SMCR5Q8TEV8 140 aa8.4□□□□□ -1.06
PBX1-212ENST00000540236 UBL5Q9BZL1 73 aa8.4□□□□□ -1.06
PBX1-212ENST00000540236 TRBV12-3P01733 135 aa8.4□□□□□ -1.06
PBX1-212ENST00000540236 FDCSPQ8NFU4 85 aa8.4□□□□□ -1.06
PBX1-212ENST00000540236 TRBV30A0A0K0K1B3 111 aa8.4□□□□□ -1.06
PBX1-212ENST00000540236 IGLV3-19P01714 112 aa8.4□□□□□ -1.06
PBX1-212ENST00000540236 TEX22C9J3V5 150 aa8.4□□□□□ -1.07
PBX1-212ENST00000540236 WISP2O76076 250 aa8.4□□□□□ -1.07
PBX1-212ENST00000540236 CXCL5P42830 114 aa8.4□□□□□ -1.07
PBX1-212ENST00000540236 ADAMTS20P59510 1910 aa8.4□□□□□ -1.07
PBX1-212ENST00000540236 IGHV4-4A0A075B6R2 117 aa8.4□□□□□ -1.07
PBX1-212ENST00000540236 AGRNO00468 2067 aa8.4□□□□□ -1.07
PBX1-212ENST00000540236 F8WEM9 126 aa8.39□□□□□ -1.07
PBX1-212ENST00000540236 PIK3CD-AS1Q5SR53 167 aa8.39□□□□□ -1.07
PBX1-212ENST00000540236 TMEM178BH3BS89 294 aa8.39□□□□□ -1.07
PBX1-212ENST00000540236 FANCD2OSQ96PS1 177 aa8.39□□□□□ -1.07
PBX1-212ENST00000540236 USF3Q68DE3 2245 aa8.39□□□□□ -1.07
PBX1-212ENST00000540236 CFHR3Q02985 330 aa8.39□□□□□ -1.07
PBX1-212ENST00000540236 IGLV4-69A0A075B6H9 119 aa8.39□□□□□ -1.07
PBX1-212ENST00000540236 SMAD5-AS1Q9Y6J3 95 aa8.39□□□□□ -1.07
PBX1-212ENST00000540236 MYO15AQ9UKN7 3530 aa8.38□□□□□ -1.07
PBX1-212ENST00000540236 MIAQ16674 131 aa8.38□□□□□ -1.07
PBX1-212ENST00000540236 MSMPQ1L6U9 139 aa8.38□□□□□ -1.07
PBX1-212ENST00000540236 ADAMTSL4-AS1Q5T5F5 129 aa8.38□□□□□ -1.07
PBX1-212ENST00000540236 TMEM30BQ3MIR4 351 aa8.38□□□□□ -1.07
PBX1-212ENST00000540236 HOXB4P17483 251 aaPredicted RBP8.38□□□□□ -1.07
PBX1-212ENST00000540236 UCNP55089 124 aa8.38□□□□□ -1.07
PBX1-212ENST00000540236 NDUFC2-KCTD14E9PQ53 114 aa8.37□□□□□ -1.07
PBX1-212ENST00000540236 IGF2-ASQ6U949 168 aa8.37□□□□□ -1.07
PBX1-212ENST00000540236 FREM1Q5H8C1 2179 aa8.37□□□□□ -1.07
PBX1-212ENST00000540236 ITLN2Q8WWU7 325 aaPredicted RBP8.37□□□□□ -1.07
PBX1-212ENST00000540236 VMO1Q7Z5L0 202 aa8.37□□□□□ -1.07
PBX1-212ENST00000540236 C17orf82Q86X59 251 aaPredicted RBP8.37□□□□□ -1.07
PBX1-212ENST00000540236 UNC80Q8N2C7 3258 aa8.37□□□□□ -1.07
PBX1-212ENST00000540236 ATP6V0E1O15342 81 aa8.37□□□□□ -1.07
PBX1-212ENST00000540236 LINC01561Q8N1V8 128 aa8.37□□□□□ -1.07
PBX1-212ENST00000540236 CLPSL2Q6UWE3 100 aa8.36□□□□□ -1.07
PBX1-212ENST00000540236 LST1O00453 97 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms