RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 DAD1P61803 113 aa13.42□□□□□ -0.26
TNFRSF1A-213ENST00000540022 CFAP126Q5VTH2 177 aa13.42□□□□□ -0.26
TNFRSF1A-213ENST00000540022 C14orf178Q8N769 122 aaPredicted RBP13.42□□□□□ -0.26
TNFRSF1A-213ENST00000540022 AP1S3Q96PC3 154 aa13.42□□□□□ -0.26
TNFRSF1A-213ENST00000540022 A0A1B0GW15 77 aa13.41□□□□□ -0.26
TNFRSF1A-213ENST00000540022 A8MWV9 139 aa13.41□□□□□ -0.26
TNFRSF1A-213ENST00000540022 CRYGDP07320 174 aa13.41□□□□□ -0.26
TNFRSF1A-213ENST00000540022 TRGC1P0CF51 173 aa13.41□□□□□ -0.26
TNFRSF1A-213ENST00000540022 C12orf74Q32Q52 190 aa13.41□□□□□ -0.26
TNFRSF1A-213ENST00000540022 C18orf15Q96N68 181 aa13.41□□□□□ -0.26
TNFRSF1A-213ENST00000540022 IGHV3-53P01767 116 aa13.4□□□□□ -0.26
TNFRSF1A-213ENST00000540022 OR4C5Q8NGB2 326 aa13.4□□□□□ -0.26
TNFRSF1A-213ENST00000540022 ZNF479Q96JC4 524 aa13.4□□□□□ -0.26
TNFRSF1A-213ENST00000540022 KIF25-AS1Q9Y6Z4 181 aa13.4□□□□□ -0.26
TNFRSF1A-213ENST00000540022 TRAV4A0A0B4J268 109 aa13.39□□□□□ -0.27
TNFRSF1A-213ENST00000540022 FAM74A4Q5TZK3 123 aa13.39□□□□□ -0.27
TNFRSF1A-213ENST00000540022 C11orf45Q8TAV5 145 aa13.39□□□□□ -0.27
TNFRSF1A-213ENST00000540022 FAM210BQ96KR6 192 aa13.39□□□□□ -0.27
TNFRSF1A-213ENST00000540022 TMEM191AQ9H0A3 160 aa13.39□□□□□ -0.27
TNFRSF1A-213ENST00000540022 EDA2RQ9HAV5 297 aa13.39□□□□□ -0.27
TNFRSF1A-213ENST00000540022 S100A8P05109 93 aa13.39□□□□□ -0.27
TNFRSF1A-213ENST00000540022 LINC00315P59091 139 aa13.39□□□□□ -0.27
TNFRSF1A-213ENST00000540022 UFSP1Q6NVU6 142 aa13.39□□□□□ -0.27
TNFRSF1A-213ENST00000540022 RASL11AQ6T310 242 aa13.39□□□□□ -0.27
TNFRSF1A-213ENST00000540022 GATD1Q8NB37 220 aa13.39□□□□□ -0.27
TNFRSF1A-213ENST00000540022 IGHV3-73A0A0B4J1V6 119 aa13.38□□□□□ -0.27
TNFRSF1A-213ENST00000540022 COLCA2A8K830 154 aa13.38□□□□□ -0.27
TNFRSF1A-213ENST00000540022 NANOS2P60321 138 aaKnown RBP13.38□□□□□ -0.27
TNFRSF1A-213ENST00000540022 SMIM15Q7Z3B0 74 aa13.38□□□□□ -0.27
TNFRSF1A-213ENST00000540022 DPH3P1Q9H4G8 78 aa13.38□□□□□ -0.27
TNFRSF1A-213ENST00000540022 SMIM17P0DL12 118 aa13.37□□□□□ -0.27
TNFRSF1A-213ENST00000540022 RAB4BP61018 213 aa13.37□□□□□ -0.27
TNFRSF1A-213ENST00000540022 TMEM136Q6ZRR5 245 aa13.37□□□□□ -0.27
TNFRSF1A-213ENST00000540022 RYR3Q15413 4870 aa13.36□□□□□ -0.27
TNFRSF1A-213ENST00000540022 CSMD3Q7Z407 3707 aa13.36□□□□□ -0.27
TNFRSF1A-213ENST00000540022 Q6ZTC4 211 aa13.36□□□□□ -0.27
TNFRSF1A-213ENST00000540022 AMN1Q8IY45 258 aa13.36□□□□□ -0.27
TNFRSF1A-213ENST00000540022 STARD9Q9P2P6 4700 aa13.35□□□□□ -0.27
TNFRSF1A-213ENST00000540022 RHODO00212 210 aa13.35□□□□□ -0.27
TNFRSF1A-213ENST00000540022 ATP5G1P05496 136 aa13.35□□□□□ -0.27
TNFRSF1A-213ENST00000540022 MGPP08493 103 aa13.35□□□□□ -0.27
TNFRSF1A-213ENST00000540022 ZFP2Q6ZN57 461 aa13.35□□□□□ -0.27
TNFRSF1A-213ENST00000540022 RNF185Q96GF1 192 aa13.35□□□□□ -0.27
TNFRSF1A-213ENST00000540022 FHL2Q14192 279 aa13.34□□□□□ -0.27
TNFRSF1A-213ENST00000540022 FAM104BQ5XKR9 115 aa13.34□□□□□ -0.27
TNFRSF1A-213ENST00000540022 GNB1LQ9BYB4 327 aa13.34□□□□□ -0.27
TNFRSF1A-213ENST00000540022 RAB4AP20338 218 aa13.34□□□□□ -0.27
TNFRSF1A-213ENST00000540022 HOXA5P20719 270 aa13.34□□□□□ -0.27
TNFRSF1A-213ENST00000540022 ZNF56Q15929 161 aa13.34□□□□□ -0.27
TNFRSF1A-213ENST00000540022 COX19Q49B96 90 aa13.34□□□□□ -0.27
TNFRSF1A-213ENST00000540022 Q6ZSN1 163 aa13.34□□□□□ -0.27
TNFRSF1A-213ENST00000540022 C3orf84H3BNL1 204 aa13.33□□□□□ -0.28
TNFRSF1A-213ENST00000540022 CIDEAO60543 219 aa13.33□□□□□ -0.28
TNFRSF1A-213ENST00000540022 MUC7Q8TAX7 377 aa13.33□□□□□ -0.28
TNFRSF1A-213ENST00000540022 DYNC2H1Q8NCM8 4307 aaKnown RBP13.32□□□□□ -0.28
TNFRSF1A-213ENST00000540022 TRGV4A0A0C4DH28 118 aa13.32□□□□□ -0.28
TNFRSF1A-213ENST00000540022 F5H697 171 aa13.32□□□□□ -0.28
TNFRSF1A-213ENST00000540022 HLA-DQA1P01909 254 aa13.32□□□□□ -0.28
TNFRSF1A-213ENST00000540022 HTN3P15516 51 aa13.32□□□□□ -0.28
TNFRSF1A-213ENST00000540022 SLAQ13239 276 aa13.32□□□□□ -0.28
TNFRSF1A-213ENST00000540022 MRPL51Q4U2R6 128 aaKnown RBP13.32□□□□□ -0.28
TNFRSF1A-213ENST00000540022 TRAV26-2A0A0B4J265 109 aa13.31□□□□□ -0.28
TNFRSF1A-213ENST00000540022 GATA1P15976 413 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF1A-213ENST00000540022 F5H768 121 aa13.3□□□□□ -0.28
TNFRSF1A-213ENST00000540022 MT-ND6P03923 174 aa13.3□□□□□ -0.28
TNFRSF1A-213ENST00000540022 RAB5AP20339 215 aa13.3□□□□□ -0.28
TNFRSF1A-213ENST00000540022 SUMO4Q6EEV6 95 aa13.3□□□□□ -0.28
TNFRSF1A-213ENST00000540022 SACSQ9NZJ4 4579 aa13.3□□□□□ -0.28
TNFRSF1A-213ENST00000540022 GAS8-AS1O95177 125 aa13.29□□□□□ -0.28
TNFRSF1A-213ENST00000540022 RPS10P46783 165 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-213ENST00000540022 FRZBQ92765 325 aa13.29□□□□□ -0.28
TNFRSF1A-213ENST00000540022 MRPL18Q9H0U6 180 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-213ENST00000540022 TRAPPC1Q9Y5R8 145 aa13.29□□□□□ -0.28
TNFRSF1A-213ENST00000540022 APCSP02743 223 aa13.29□□□□□ -0.28
TNFRSF1A-213ENST00000540022 CASC10Q5T4H9 136 aa13.29□□□□□ -0.28
TNFRSF1A-213ENST00000540022 SLC25A29Q8N8R3 303 aa13.29□□□□□ -0.28
TNFRSF1A-213ENST00000540022 HHLA3Q9XRX5 114 aa13.29□□□□□ -0.28
TNFRSF1A-213ENST00000540022 DEFB131BA0A096LNP1 70 aa13.28□□□□□ -0.28
TNFRSF1A-213ENST00000540022 SMKR1H3BMG3 65 aa13.28□□□□□ -0.28
TNFRSF1A-213ENST00000540022 M0QY20 66 aa13.28□□□□□ -0.28
TNFRSF1A-213ENST00000540022 NCR2O95944 276 aa13.28□□□□□ -0.28
TNFRSF1A-213ENST00000540022 P0DMU3 169 aa13.28□□□□□ -0.28
TNFRSF1A-213ENST00000540022 FAM231AP0DMU4 169 aa13.28□□□□□ -0.28
TNFRSF1A-213ENST00000540022 FAM231CP0DMU5 169 aa13.28□□□□□ -0.28
TNFRSF1A-213ENST00000540022 KIAA1644Q3SXP7 199 aa13.28□□□□□ -0.28
TNFRSF1A-213ENST00000540022 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF1A-213ENST00000540022 Q9UF83 564 aa13.28□□□□□ -0.28
TNFRSF1A-213ENST00000540022 NACAE9PAV3 2078 aa13.27□□□□□ -0.29
TNFRSF1A-213ENST00000540022 TRBV6-4A0A1B0GX49 114 aa13.27□□□□□ -0.29
TNFRSF1A-213ENST00000540022 CRYBA4P53673 196 aa13.27□□□□□ -0.29
TNFRSF1A-213ENST00000540022 FABP9Q0Z7S8 132 aa13.27□□□□□ -0.29
TNFRSF1A-213ENST00000540022 MRAP2Q96G30 205 aa13.27□□□□□ -0.29
TNFRSF1A-213ENST00000540022 PRO0255Q9UI72 69 aa13.27□□□□□ -0.29
TNFRSF1A-213ENST00000540022 TRAV10A0A0B4J240 114 aa13.26□□□□□ -0.29
TNFRSF1A-213ENST00000540022 K7EQD1 137 aa13.26□□□□□ -0.29
TNFRSF1A-213ENST00000540022 LYSTQ99698 3801 aa13.26□□□□□ -0.29
TNFRSF1A-213ENST00000540022 D6R8Y8 96 aa13.25□□□□□ -0.29
TNFRSF1A-213ENST00000540022 CKS2P33552 79 aa13.25□□□□□ -0.29
TNFRSF1A-213ENST00000540022 VSIG2Q96IQ7 327 aa13.25□□□□□ -0.29
TNFRSF1A-213ENST00000540022 TRAV26-1A0A087WT03 109 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms