RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 LEPP41159 167 aa12.57□□□□□ -0.4
COPS3-212ENST00000539941 RIGQ13278 110 aa12.57□□□□□ -0.4
COPS3-212ENST00000539941 TMSB15BA0A087X1C1 80 aa12.56□□□□□ -0.4
COPS3-212ENST00000539941 IGHV1-24A0A0C4DH33 117 aa12.56□□□□□ -0.4
COPS3-212ENST00000539941 IGLC6P0CF74 106 aa12.56□□□□□ -0.4
COPS3-212ENST00000539941 FABP2P12104 132 aa12.56□□□□□ -0.4
COPS3-212ENST00000539941 AZU1P20160 251 aa12.56□□□□□ -0.4
COPS3-212ENST00000539941 PRR9Q5T870 116 aa12.56□□□□□ -0.4
COPS3-212ENST00000539941 GDF5OSQ5U4N7 250 aa12.56□□□□□ -0.4
COPS3-212ENST00000539941 IGKV3D-20A0A0C4DH25 116 aa12.55□□□□□ -0.4
COPS3-212ENST00000539941 A0A1W2PPM0 123 aa12.55□□□□□ -0.4
COPS3-212ENST00000539941 C2orf91Q6ZV80 131 aa12.55□□□□□ -0.4
COPS3-212ENST00000539941 ZNF256Q9Y2P7 627 aaPredicted RBP12.55□□□□□ -0.4
COPS3-212ENST00000539941 FBN3Q75N90 2809 aa12.55□□□□□ -0.4
COPS3-212ENST00000539941 A8MTW9 85 aa12.54□□□□□ -0.4
COPS3-212ENST00000539941 PF4P02776 101 aa12.54□□□□□ -0.4
COPS3-212ENST00000539941 DEFB131AP59861 70 aa12.54□□□□□ -0.4
COPS3-212ENST00000539941 C11orf21Q9P2W6 132 aa12.54□□□□□ -0.4
COPS3-212ENST00000539941 SPCS1Q9Y6A9 102 aa12.54□□□□□ -0.4
COPS3-212ENST00000539941 HLA-DRB4P13762 266 aa12.54□□□□□ -0.4
COPS3-212ENST00000539941 CAMPP49913 170 aa12.54□□□□□ -0.4
COPS3-212ENST00000539941 CFAP161Q6P656 301 aa12.54□□□□□ -0.4
COPS3-212ENST00000539941 LYZL1Q6UWQ5 148 aa12.54□□□□□ -0.4
COPS3-212ENST00000539941 ZNF575Q86XF7 245 aa12.54□□□□□ -0.4
COPS3-212ENST00000539941 GATD1Q8NB37 220 aa12.54□□□□□ -0.4
COPS3-212ENST00000539941 MAP6D1Q9H9H5 199 aa12.54□□□□□ -0.4
COPS3-212ENST00000539941 HLA-DRB4X5D2U9 266 aa12.54□□□□□ -0.4
COPS3-212ENST00000539941 IGLV1-51P01701 117 aa12.53□□□□□ -0.4
COPS3-212ENST00000539941 ARMS2P0C7Q2 107 aa12.53□□□□□ -0.4
COPS3-212ENST00000539941 RNASE4P34096 147 aaKnown RBP12.53□□□□□ -0.4
COPS3-212ENST00000539941 CMC4P56277 68 aaPredicted RBP12.53□□□□□ -0.4
COPS3-212ENST00000539941 LINC00482Q8N8I6 264 aa12.53□□□□□ -0.4
COPS3-212ENST00000539941 CITED1Q99966 193 aa12.53□□□□□ -0.4
COPS3-212ENST00000539941 CNFNQ9BYD5 112 aa12.53□□□□□ -0.4
COPS3-212ENST00000539941 WNK1Q9H4A3 2382 aa12.53□□□□□ -0.4
COPS3-212ENST00000539941 H3BUT2 72 aa12.52□□□□□ -0.4
COPS3-212ENST00000539941 URB1-AS1Q96HZ7 61 aa12.52□□□□□ -0.4
COPS3-212ENST00000539941 SPATA25Q9BR10 227 aa12.52□□□□□ -0.4
COPS3-212ENST00000539941 TPPP3Q9BW30 176 aa12.52□□□□□ -0.4
COPS3-212ENST00000539941 J3KRW8 73 aa12.51□□□□□ -0.41
COPS3-212ENST00000539941 KIR3DS1Q14943 382 aa12.51□□□□□ -0.41
COPS3-212ENST00000539941 H3BMM0 161 aa12.51□□□□□ -0.41
COPS3-212ENST00000539941 AMTNQ6UX39 209 aa12.51□□□□□ -0.41
COPS3-212ENST00000539941 MRAP2Q96G30 205 aa12.51□□□□□ -0.41
COPS3-212ENST00000539941 GAGE12HA6NDE8 117 aa12.5□□□□□ -0.41
COPS3-212ENST00000539941 CKS1BP61024 79 aa12.5□□□□□ -0.41
COPS3-212ENST00000539941 FAM110AQ9BQ89 295 aa12.5□□□□□ -0.41
COPS3-212ENST00000539941 KNCNA6PVL3 124 aa12.49□□□□□ -0.41
COPS3-212ENST00000539941 ODF3L2Q3SX64 289 aa12.49□□□□□ -0.41
COPS3-212ENST00000539941 ZNF493Q6ZR52 646 aa12.49□□□□□ -0.41
COPS3-212ENST00000539941 BOD1L2Q8IYS8 172 aa12.49□□□□□ -0.41
COPS3-212ENST00000539941 SORL1Q92673 2214 aa12.49□□□□□ -0.41
COPS3-212ENST00000539941 F8W1H4 67 aa12.48□□□□□ -0.41
COPS3-212ENST00000539941 SNAI2O43623 268 aa12.48□□□□□ -0.41
COPS3-212ENST00000539941 MED14OSP0DP75 135 aa12.48□□□□□ -0.41
COPS3-212ENST00000539941 Q6ZQT7 251 aa12.48□□□□□ -0.41
COPS3-212ENST00000539941 TENM1Q9UKZ4 2725 aa12.48□□□□□ -0.41
COPS3-212ENST00000539941 OR11H12B2RN74 326 aa12.48□□□□□ -0.41
COPS3-212ENST00000539941 IGKV3-20P01619 116 aa12.48□□□□□ -0.41
COPS3-212ENST00000539941 FGF6P10767 208 aa12.48□□□□□ -0.41
COPS3-212ENST00000539941 RPL24P83731 157 aaKnown RBP12.48□□□□□ -0.41
COPS3-212ENST00000539941 ANXA2RQ3ZCQ2 193 aa12.48□□□□□ -0.41
COPS3-212ENST00000539941 SMIM13P0DJ93 91 aa12.47□□□□□ -0.41
COPS3-212ENST00000539941 ASIPP42127 132 aa12.47□□□□□ -0.41
COPS3-212ENST00000539941 INSL3P51460 131 aa12.47□□□□□ -0.41
COPS3-212ENST00000539941 CACNG7P62955 275 aa12.47□□□□□ -0.41
COPS3-212ENST00000539941 SMAGPQ0VAQ4 97 aa12.47□□□□□ -0.41
COPS3-212ENST00000539941 SPINK13Q1W4C9 94 aa12.47□□□□□ -0.41
COPS3-212ENST00000539941 FAM159AQ6UWV7 190 aa12.47□□□□□ -0.41
COPS3-212ENST00000539941 GTSF1LQ9H1H1 148 aa12.47□□□□□ -0.41
COPS3-212ENST00000539941 TRAV12-3A0A0B4J271 114 aa12.46□□□□□ -0.41
COPS3-212ENST00000539941 BEAN1Q3B7T3 259 aa12.46□□□□□ -0.41
COPS3-212ENST00000539941 SAMD5Q5TGI4 173 aa12.46□□□□□ -0.41
COPS3-212ENST00000539941 AGRNO00468 2067 aa12.46□□□□□ -0.41
COPS3-212ENST00000539941 IGHV4-4A0A075B6R2 117 aa12.45□□□□□ -0.42
COPS3-212ENST00000539941 TWIST1Q15672 202 aa12.45□□□□□ -0.42
COPS3-212ENST00000539941 LGALS9BQ3B8N2 356 aa12.45□□□□□ -0.42
COPS3-212ENST00000539941 LGALS9CQ6DKI2 356 aa12.45□□□□□ -0.42
COPS3-212ENST00000539941 TEX48A0A1B0GUV7 120 aa12.45□□□□□ -0.42
COPS3-212ENST00000539941 S100A4P26447 101 aaKnown RBP12.45□□□□□ -0.42
COPS3-212ENST00000539941 TRAV12-2A0A075B6T6 113 aa12.44□□□□□ -0.42
COPS3-212ENST00000539941 ZNF747Q9BV97 191 aa12.44□□□□□ -0.42
COPS3-212ENST00000539941 HIGD1BQ9P298 99 aa12.44□□□□□ -0.42
COPS3-212ENST00000539941 RBMY1BA6NDE4 496 aaKnown RBP12.43□□□□□ -0.42
COPS3-212ENST00000539941 RBMY1EA6NEQ0 496 aaKnown RBP12.43□□□□□ -0.42
COPS3-212ENST00000539941 H3BVH4 76 aa12.43□□□□□ -0.42
COPS3-212ENST00000539941 RBMY1DP0C7P1 496 aaKnown RBP12.43□□□□□ -0.42
COPS3-212ENST00000539941 C9orf66Q5T8R8 295 aa12.43□□□□□ -0.42
COPS3-212ENST00000539941 FAM104BQ5XKR9 115 aa12.43□□□□□ -0.42
COPS3-212ENST00000539941 LINC00173Q6ZV60 143 aa12.43□□□□□ -0.42
COPS3-212ENST00000539941 TP73-AS1Q9UF72 201 aa12.43□□□□□ -0.42
COPS3-212ENST00000539941 IGHV1OR15-1A0A075B7D0 117 aa12.42□□□□□ -0.42
COPS3-212ENST00000539941 STHQ8IWL8 128 aa12.42□□□□□ -0.42
COPS3-212ENST00000539941 AP5S1Q9NUS5 200 aa12.42□□□□□ -0.42
COPS3-212ENST00000539941 MRPL16Q9NX20 251 aaKnown RBP12.42□□□□□ -0.42
COPS3-212ENST00000539941 SPANXN1Q5VSR9 72 aa12.42□□□□□ -0.42
COPS3-212ENST00000539941 TRPT1Q86TN4 253 aaKnown RBP12.42□□□□□ -0.42
COPS3-212ENST00000539941 OR11H2Q8NH07 326 aa12.42□□□□□ -0.42
COPS3-212ENST00000539941 MCRIP2Q9BUT9 160 aaKnown RBP12.42□□□□□ -0.42
COPS3-212ENST00000539941 GNRH2O43555 120 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms