RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 MRAPQ8TCY5 172 aa11.57□□□□□ -0.56
TRAF3-204ENST00000539721 SAMD10Q9BYL1 202 aa11.57□□□□□ -0.56
TRAF3-204ENST00000539721 KIF25-AS1Q9Y6Z4 181 aa11.57□□□□□ -0.56
TRAF3-204ENST00000539721 DEFB4AO15263 64 aa11.56□□□□□ -0.56
TRAF3-204ENST00000539721 NBEAL2Q6ZNJ1 2754 aa11.56□□□□□ -0.56
TRAF3-204ENST00000539721 GAGE12BA1L429 117 aa11.56□□□□□ -0.56
TRAF3-204ENST00000539721 GAGE7O76087 117 aa11.56□□□□□ -0.56
TRAF3-204ENST00000539721 CRYGDP07320 174 aa11.56□□□□□ -0.56
TRAF3-204ENST00000539721 GAGE12FP0CL80 117 aa11.56□□□□□ -0.56
TRAF3-204ENST00000539721 GAGE12GP0CL81 117 aa11.56□□□□□ -0.56
TRAF3-204ENST00000539721 GAGE12IP0CL82 117 aa11.56□□□□□ -0.56
TRAF3-204ENST00000539721 SRIP30626 198 aa11.56□□□□□ -0.56
TRAF3-204ENST00000539721 CFAP126Q5VTH2 177 aa11.56□□□□□ -0.56
TRAF3-204ENST00000539721 D6R8Y8 96 aa11.55□□□□□ -0.56
TRAF3-204ENST00000539721 SMKR1H3BMG3 65 aa11.55□□□□□ -0.56
TRAF3-204ENST00000539721 RS1O15537 224 aa11.55□□□□□ -0.56
TRAF3-204ENST00000539721 HIST1H2BKO60814 126 aa11.55□□□□□ -0.56
TRAF3-204ENST00000539721 HIST1H2BJP06899 126 aa11.55□□□□□ -0.56
TRAF3-204ENST00000539721 HIST1H2BOP23527 126 aa11.55□□□□□ -0.56
TRAF3-204ENST00000539721 CKS2P33552 79 aa11.55□□□□□ -0.56
TRAF3-204ENST00000539721 HIST1H2BBP33778 126 aa11.55□□□□□ -0.56
TRAF3-204ENST00000539721 HIST1H2BDP58876 126 aa11.55□□□□□ -0.56
TRAF3-204ENST00000539721 HIST1H2BCP62807 126 aa11.55□□□□□ -0.56
TRAF3-204ENST00000539721 HIST2H2BEQ16778 126 aa11.55□□□□□ -0.56
TRAF3-204ENST00000539721 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.55□□□□□ -0.56
TRAF3-204ENST00000539721 HIST1H2BHQ93079 126 aa11.55□□□□□ -0.56
TRAF3-204ENST00000539721 HIST1H2BNQ99877 126 aa11.55□□□□□ -0.56
TRAF3-204ENST00000539721 HIST1H2BMQ99879 126 aa11.55□□□□□ -0.56
TRAF3-204ENST00000539721 SPATA25Q9BR10 227 aa11.55□□□□□ -0.56
TRAF3-204ENST00000539721 F5H697 171 aa11.54□□□□□ -0.56
TRAF3-204ENST00000539721 NCR2O95944 276 aa11.54□□□□□ -0.56
TRAF3-204ENST00000539721 LINC00315P59091 139 aa11.54□□□□□ -0.56
TRAF3-204ENST00000539721 ZNF56Q15929 161 aa11.54□□□□□ -0.56
TRAF3-204ENST00000539721 ORMDL3Q8N138 153 aa11.54□□□□□ -0.56
TRAF3-204ENST00000539721 ALKBH7Q9BT30 221 aaPredicted RBP11.54□□□□□ -0.56
TRAF3-204ENST00000539721 NACAE9PAV3 2078 aa11.54□□□□□ -0.56
TRAF3-204ENST00000539721 TRGV2A0A075B6R0 118 aa11.54□□□□□ -0.56
TRAF3-204ENST00000539721 TRAV26-2A0A0B4J265 109 aa11.54□□□□□ -0.56
TRAF3-204ENST00000539721 LYRM9A8MSI8 78 aa11.54□□□□□ -0.56
TRAF3-204ENST00000539721 FAM222AQ5U5X8 452 aa11.54□□□□□ -0.56
TRAF3-204ENST00000539721 OR4C5Q8NGB2 326 aa11.54□□□□□ -0.56
TRAF3-204ENST00000539721 MRAP2Q96G30 205 aa11.54□□□□□ -0.56
TRAF3-204ENST00000539721 U3KQK5 164 aa11.54□□□□□ -0.56
TRAF3-204ENST00000539721 IGHV3-73A0A0B4J1V6 119 aa11.53□□□□□ -0.56
TRAF3-204ENST00000539721 TRAV4A0A0B4J268 109 aa11.53□□□□□ -0.56
TRAF3-204ENST00000539721 RHODO00212 210 aa11.53□□□□□ -0.56
TRAF3-204ENST00000539721 PPBPP02775 128 aa11.53□□□□□ -0.56
TRAF3-204ENST00000539721 POM121L12Q8N7R1 296 aa11.53□□□□□ -0.56
TRAF3-204ENST00000539721 PRELID3AQ96N28 172 aa11.53□□□□□ -0.56
TRAF3-204ENST00000539721 TM2D3Q9BRN9 247 aa11.53□□□□□ -0.56
TRAF3-204ENST00000539721 DEFB130BP0DP73 79 aa11.52□□□□□ -0.57
TRAF3-204ENST00000539721 DEFB130AP0DP74 79 aa11.52□□□□□ -0.57
TRAF3-204ENST00000539721 UFSP1Q6NVU6 142 aa11.52□□□□□ -0.57
TRAF3-204ENST00000539721 DKK2Q9UBU2 259 aa11.52□□□□□ -0.57
TRAF3-204ENST00000539721 GAS8-AS1O95177 125 aa11.51□□□□□ -0.57
TRAF3-204ENST00000539721 IGHV3-53P01767 116 aa11.51□□□□□ -0.57
TRAF3-204ENST00000539721 SUMO4Q6EEV6 95 aa11.51□□□□□ -0.57
TRAF3-204ENST00000539721 LINC00612Q8N6U2 182 aa11.51□□□□□ -0.57
TRAF3-204ENST00000539721 GATA1P15976 413 aaPredicted RBP11.51□□□□□ -0.57
TRAF3-204ENST00000539721 ZFP2Q6ZN57 461 aa11.51□□□□□ -0.57
TRAF3-204ENST00000539721 ZNF479Q96JC4 524 aa11.51□□□□□ -0.57
TRAF3-204ENST00000539721 SPART-AS1P0CW21 52 aa11.5□□□□□ -0.57
TRAF3-204ENST00000539721 CELA1Q9UNI1 258 aa11.5□□□□□ -0.57
TRAF3-204ENST00000539721 NPYP01303 97 aa11.49□□□□□ -0.57
TRAF3-204ENST00000539721 NDUFA6P56556 154 aa11.49□□□□□ -0.57
TRAF3-204ENST00000539721 IQCJQ1A5X6 159 aa11.49□□□□□ -0.57
TRAF3-204ENST00000539721 C18orf32Q8TCD1 76 aa11.49□□□□□ -0.57
TRAF3-204ENST00000539721 C11orf68Q9H3H3 251 aaKnown RBP11.49□□□□□ -0.57
TRAF3-204ENST00000539721 ZMAT4Q9H898 229 aa11.49□□□□□ -0.57
TRAF3-204ENST00000539721 TNFRSF6BO95407 300 aa11.49□□□□□ -0.57
TRAF3-204ENST00000539721 S100A6P06703 90 aa11.49□□□□□ -0.57
TRAF3-204ENST00000539721 DAD1P61803 113 aa11.49□□□□□ -0.57
TRAF3-204ENST00000539721 OR10J3Q5JRS4 329 aa11.49□□□□□ -0.57
TRAF3-204ENST00000539721 LAMTOR2Q9Y2Q5 125 aa11.49□□□□□ -0.57
TRAF3-204ENST00000539721 TEX48A0A1B0GUV7 120 aa11.48□□□□□ -0.57
TRAF3-204ENST00000539721 CIDEAO60543 219 aa11.48□□□□□ -0.57
TRAF3-204ENST00000539721 DEFA6Q01524 100 aa11.48□□□□□ -0.57
TRAF3-204ENST00000539721 Q0VG73 95 aa11.48□□□□□ -0.57
TRAF3-204ENST00000539721 NRACQ8N912 160 aa11.48□□□□□ -0.57
TRAF3-204ENST00000539721 RPL39LQ96EH5 51 aaKnown RBP11.48□□□□□ -0.57
TRAF3-204ENST00000539721 C18orf15Q96N68 181 aa11.48□□□□□ -0.57
TRAF3-204ENST00000539721 B9D2Q9BPU9 175 aa11.48□□□□□ -0.57
TRAF3-204ENST00000539721 H7C1H1 209 aa11.47□□□□□ -0.57
TRAF3-204ENST00000539721 Q6ZSN1 163 aa11.47□□□□□ -0.57
TRAF3-204ENST00000539721 BAGE3Q86Y29 109 aa11.47□□□□□ -0.57
TRAF3-204ENST00000539721 A0A0J9YWU9 116 aa11.46□□□□□ -0.57
TRAF3-204ENST00000539721 M0QY20 66 aa11.46□□□□□ -0.57
TRAF3-204ENST00000539721 PPP1R17O96001 155 aa11.46□□□□□ -0.57
TRAF3-204ENST00000539721 TRGV4A0A0C4DH28 118 aa11.46□□□□□ -0.58
TRAF3-204ENST00000539721 LOC389332A0A1B0GUA5 103 aa11.46□□□□□ -0.58
TRAF3-204ENST00000539721 MAP1LC3AQ9H492 121 aa11.46□□□□□ -0.58
TRAF3-204ENST00000539721 EDA2RQ9HAV5 297 aa11.45□□□□□ -0.58
TRAF3-204ENST00000539721 NIT2Q9NQR4 276 aa11.44□□□□□ -0.58
TRAF3-204ENST00000539721 P0DMU3 169 aa11.44□□□□□ -0.58
TRAF3-204ENST00000539721 FAM231AP0DMU4 169 aa11.44□□□□□ -0.58
TRAF3-204ENST00000539721 FAM231CP0DMU5 169 aa11.44□□□□□ -0.58
TRAF3-204ENST00000539721 FHL2Q14192 279 aa11.44□□□□□ -0.58
TRAF3-204ENST00000539721 PRSS3P2Q8NHM4 247 aa11.44□□□□□ -0.58
TRAF3-204ENST00000539721 ST20Q9HBF5 79 aa11.44□□□□□ -0.58
TRAF3-204ENST00000539721 K7EQD1 137 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms