RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, human

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-215	ENST00000539712	GAGE13	Q4V321	117 aa		11.23	□□□□□ -0.61
DDB1-215	ENST00000539712	CDPF1	Q6NVV7	123 aa		11.23	□□□□□ -0.61
DDB1-215	ENST00000539712	TMUB2	Q71RG4	321 aa		11.23	□□□□□ -0.61
DDB1-215	ENST00000539712	SFRP2	Q96HF1	295 aa		11.23	□□□□□ -0.61
DDB1-215	ENST00000539712	EREG	O14944	169 aa		11.22	□□□□□ -0.61
DDB1-215	ENST00000539712	KRTAP10-1	P60331	282 aa		11.22	□□□□□ -0.61
DDB1-215	ENST00000539712	VPS13B	Q7Z7G8	4022 aa		11.22	□□□□□ -0.61
DDB1-215	ENST00000539712	IGHV3-30	P01768	117 aa		11.21	□□□□□ -0.61
DDB1-215	ENST00000539712	IGHV3-33	P01772	117 aa		11.21	□□□□□ -0.61
DDB1-215	ENST00000539712	H2AFB1	P0C5Y9	115 aa		11.21	□□□□□ -0.61
DDB1-215	ENST00000539712	IGHV3-30-3	P0DP02	117 aa		11.21	□□□□□ -0.61
DDB1-215	ENST00000539712	IGHV3-30-5	P0DP03	117 aa		11.21	□□□□□ -0.61
DDB1-215	ENST00000539712	XG	P55808	180 aa		11.21	□□□□□ -0.61
DDB1-215	ENST00000539712	SYT8	Q8NBV8	401 aa		11.21	□□□□□ -0.61
DDB1-215	ENST00000539712	PHLDA3	Q9Y5J5	127 aa		11.21	□□□□□ -0.61
DDB1-215	ENST00000539712		A0A087WWL8	130 aa		11.2	□□□□□ -0.62
DDB1-215	ENST00000539712	S100A9	P06702	114 aa	Known RBP	11.2	□□□□□ -0.62
DDB1-215	ENST00000539712	RPL19	P84098	196 aa	Known RBP	11.2	□□□□□ -0.62
DDB1-215	ENST00000539712		M0R381	172 aa		11.19	□□□□□ -0.62
DDB1-215	ENST00000539712	RHOD	O00212	210 aa		11.19	□□□□□ -0.62
DDB1-215	ENST00000539712	BAGE2	Q86Y30	109 aa		11.19	□□□□□ -0.62
DDB1-215	ENST00000539712	TRAV1-1	A0A0B4J248	108 aa		11.18	□□□□□ -0.62
DDB1-215	ENST00000539712	TPT1	P13693	172 aa	Known RBP	11.18	□□□□□ -0.62
DDB1-215	ENST00000539712	EIF5A	P63241	154 aa	Known RBP	11.18	□□□□□ -0.62
DDB1-215	ENST00000539712	FAM74A4	Q5TZK3	123 aa		11.18	□□□□□ -0.62
DDB1-215	ENST00000539712	ZFP82	Q8N141	532 aa		11.18	□□□□□ -0.62
DDB1-215	ENST00000539712	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.18	□□□□□ -0.62
DDB1-215	ENST00000539712		Q9HAA7	133 aa		11.18	□□□□□ -0.62
DDB1-215	ENST00000539712	PFDN1	O60925	122 aa		11.17	□□□□□ -0.62
DDB1-215	ENST00000539712	LAGE3	Q14657	143 aa		11.17	□□□□□ -0.62
DDB1-215	ENST00000539712	OR10AG1	Q8NH19	301 aa		11.17	□□□□□ -0.62
DDB1-215	ENST00000539712	DERL1	Q9BUN8	251 aa		11.17	□□□□□ -0.62
DDB1-215	ENST00000539712	SRRM2	Q9UQ35	2752 aa	Known RBP	11.16	□□□□□ -0.62
DDB1-215	ENST00000539712	CXCL1	P09341	107 aa		11.16	□□□□□ -0.62
DDB1-215	ENST00000539712	RPL35	P42766	123 aa	Known RBP	11.16	□□□□□ -0.62
DDB1-215	ENST00000539712	DAZ4	Q86SG3	579 aa	Known RBP	11.16	□□□□□ -0.62
DDB1-215	ENST00000539712	C11orf52	Q96A22	123 aa		11.16	□□□□□ -0.62
DDB1-215	ENST00000539712	DAZ3	Q9NR90	486 aa	Known RBP	11.16	□□□□□ -0.62
DDB1-215	ENST00000539712		A0A087WWC5	75 aa		11.15	□□□□□ -0.62
DDB1-215	ENST00000539712	SNAI2	O43623	268 aa		11.15	□□□□□ -0.62
DDB1-215	ENST00000539712	TCTE3	Q8IZS6	198 aa		11.15	□□□□□ -0.62
DDB1-215	ENST00000539712	GNG13	Q9P2W3	67 aa		11.15	□□□□□ -0.62
DDB1-215	ENST00000539712	TRBV10-1	A0A0K0K1A3	114 aa		11.14	□□□□□ -0.63
DDB1-215	ENST00000539712	PSCA	O43653	123 aa		11.14	□□□□□ -0.63
DDB1-215	ENST00000539712	IGLV2-8	P01709	118 aa		11.14	□□□□□ -0.63
DDB1-215	ENST00000539712	GCSH	P23434	173 aa		11.14	□□□□□ -0.63
DDB1-215	ENST00000539712	WFDC2	Q14508	124 aa		11.14	□□□□□ -0.63
DDB1-215	ENST00000539712	MANBAL	Q9NQG1	85 aa		11.14	□□□□□ -0.63
DDB1-215	ENST00000539712	MUC21	A0A0G2JKD1	596 aa		11.13	□□□□□ -0.63
DDB1-215	ENST00000539712	MUC21	A0A140T8X8	626 aa		11.13	□□□□□ -0.63
DDB1-215	ENST00000539712	OR5AL1	P0C617	328 aa		11.13	□□□□□ -0.63
DDB1-215	ENST00000539712	SULT1A2	P50226	295 aa		11.13	□□□□□ -0.63
DDB1-215	ENST00000539712	RAB5C	P51148	216 aa		11.13	□□□□□ -0.63
DDB1-215	ENST00000539712	UBE2D3	P61077	147 aa		11.13	□□□□□ -0.63
DDB1-215	ENST00000539712	UBE2D2	P62837	147 aa		11.13	□□□□□ -0.63
DDB1-215	ENST00000539712	PRR27	Q6MZM9	219 aa		11.13	□□□□□ -0.63
DDB1-215	ENST00000539712	NIT1	Q86X76	327 aa		11.13	□□□□□ -0.63
DDB1-215	ENST00000539712		Q8N814	137 aa		11.13	□□□□□ -0.63
DDB1-215	ENST00000539712	OR10G8	Q8NGN5	311 aa		11.13	□□□□□ -0.63
DDB1-215	ENST00000539712	DNAJC30	Q96LL9	226 aa		11.13	□□□□□ -0.63
DDB1-215	ENST00000539712	KIF25-AS1	Q9Y6Z4	181 aa		11.12	□□□□□ -0.63
DDB1-215	ENST00000539712	HERC1	Q15751	4861 aa		11.11	□□□□□ -0.63
DDB1-215	ENST00000539712	TRBV7-3	A0A075B6L6	115 aa		11.11	□□□□□ -0.63
DDB1-215	ENST00000539712	RAB4B	P61018	213 aa		11.11	□□□□□ -0.63
DDB1-215	ENST00000539712		Q6ZNX1	250 aa		11.11	□□□□□ -0.63
DDB1-215	ENST00000539712	NTN5	Q8WTR8	489 aa	Predicted RBP	11.11	□□□□□ -0.63
DDB1-215	ENST00000539712	IGLV5-52	A0A0A0MRZ9	124 aa		11.1	□□□□□ -0.63
DDB1-215	ENST00000539712	TRAV8-3	A0A0A6YYJ7	113 aa		11.1	□□□□□ -0.63
DDB1-215	ENST00000539712	RAB19	A4D1S5	217 aa		11.1	□□□□□ -0.63
DDB1-215	ENST00000539712	CENPW	Q5EE01	88 aa		11.1	□□□□□ -0.63
DDB1-215	ENST00000539712	NEXN-AS1	Q8NBZ9	246 aa		11.1	□□□□□ -0.63
DDB1-215	ENST00000539712	TM2D2	Q9BX73	214 aa		11.1	□□□□□ -0.63
DDB1-215	ENST00000539712	MYCBP2	O75592	4640 aa		11.1	□□□□□ -0.63
DDB1-215	ENST00000539712	TRBV20OR9-2	A0A075B6H5	130 aa		11.09	□□□□□ -0.63
DDB1-215	ENST00000539712	C19orf71	A6NCJ1	209 aa		11.09	□□□□□ -0.63
DDB1-215	ENST00000539712	C1QB	P02746	253 aa		11.09	□□□□□ -0.63
DDB1-215	ENST00000539712	RPL36A	P83881	106 aa	Known RBP	11.09	□□□□□ -0.63
DDB1-215	ENST00000539712	EIF5AL1	Q6IS14	154 aa	Known RBP	11.09	□□□□□ -0.63
DDB1-215	ENST00000539712	RPL36AL	Q969Q0	106 aa	Known RBP	11.09	□□□□□ -0.63
DDB1-215	ENST00000539712	IGLC6	P0CF74	106 aa		11.08	□□□□□ -0.64
DDB1-215	ENST00000539712	GZMB	P10144	247 aa		11.08	□□□□□ -0.64
DDB1-215	ENST00000539712	MEF2B	Q02080	365 aa	Predicted RBP	11.08	□□□□□ -0.64
DDB1-215	ENST00000539712	RBFOX3	A6NFN3	312 aa		11.07	□□□□□ -0.64
DDB1-215	ENST00000539712	EPM2A	B3EWF7	344 aa		11.07	□□□□□ -0.64
DDB1-215	ENST00000539712	SST	P61278	116 aa		11.07	□□□□□ -0.64
DDB1-215	ENST00000539712	SPANXN1	Q5VSR9	72 aa		11.07	□□□□□ -0.64
DDB1-215	ENST00000539712	SLC51B	Q86UW2	128 aa		11.07	□□□□□ -0.64
DDB1-215	ENST00000539712	FAM30A	Q9NZY2	134 aa		11.07	□□□□□ -0.64
DDB1-215	ENST00000539712	KLK12	Q9UKR0	248 aa		11.07	□□□□□ -0.64
DDB1-215	ENST00000539712	TRBV6-8	A0A0A6YYG3	113 aa		11.06	□□□□□ -0.64
DDB1-215	ENST00000539712	LECT2	O14960	151 aa		11.06	□□□□□ -0.64
DDB1-215	ENST00000539712	HAMP	P81172	84 aa		11.06	□□□□□ -0.64
DDB1-215	ENST00000539712	ZNF56	Q15929	161 aa		11.06	□□□□□ -0.64
DDB1-215	ENST00000539712	TOR2A	Q5JU69	321 aa		11.06	□□□□□ -0.64
DDB1-215	ENST00000539712	TEX46	H3BTG2	121 aa		11.05	□□□□□ -0.64
DDB1-215	ENST00000539712	PDE6D	O43924	150 aa		11.05	□□□□□ -0.64
DDB1-215	ENST00000539712	BCL2	P10415	239 aa		11.05	□□□□□ -0.64
DDB1-215	ENST00000539712	GNG4	P50150	75 aa		11.05	□□□□□ -0.64
DDB1-215	ENST00000539712	ATRAID	Q6UW56	229 aa		11.05	□□□□□ -0.64
DDB1-215	ENST00000539712	NTM-AS1	Q6ZSK4	140 aa		11.05	□□□□□ -0.64

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