RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 S100A8P05109 93 aa6.09□□□□□ -1.43
LPCAT3-208ENST00000538987 EVI2AP22794 236 aa6.09□□□□□ -1.43
LPCAT3-208ENST00000538987 S100A1P23297 94 aa6.09□□□□□ -1.43
LPCAT3-208ENST00000538987 RAB4BP61018 213 aa6.09□□□□□ -1.43
LPCAT3-208ENST00000538987 ZNF56Q15929 161 aa6.09□□□□□ -1.43
LPCAT3-208ENST00000538987 ATRAIDQ6UW56 229 aa6.09□□□□□ -1.43
LPCAT3-208ENST00000538987 PHLDA1Q8WV24 401 aaPredicted RBP6.09□□□□□ -1.43
LPCAT3-208ENST00000538987 BTF3L4Q96K17 158 aa6.09□□□□□ -1.43
LPCAT3-208ENST00000538987 C18orf15Q96N68 181 aa6.09□□□□□ -1.43
LPCAT3-208ENST00000538987 SAMD10Q9BYL1 202 aa6.09□□□□□ -1.43
LPCAT3-208ENST00000538987 HHLA3Q9XRX5 114 aa6.09□□□□□ -1.43
LPCAT3-208ENST00000538987 A0A0J9YY99 117 aa6.08□□□□□ -1.44
LPCAT3-208ENST00000538987 A0A1B0GW15 77 aa6.08□□□□□ -1.44
LPCAT3-208ENST00000538987 RHODO00212 210 aa6.08□□□□□ -1.44
LPCAT3-208ENST00000538987 NXPH4O95158 308 aa6.08□□□□□ -1.44
LPCAT3-208ENST00000538987 CRYGDP07320 174 aa6.08□□□□□ -1.44
LPCAT3-208ENST00000538987 HOXA5P20719 270 aa6.08□□□□□ -1.44
LPCAT3-208ENST00000538987 HBBP68871 147 aa6.08□□□□□ -1.44
LPCAT3-208ENST00000538987 SLAQ13239 276 aa6.08□□□□□ -1.44
LPCAT3-208ENST00000538987 FHL2Q14192 279 aa6.08□□□□□ -1.44
LPCAT3-208ENST00000538987 ZFAND6Q6FIF0 208 aa6.08□□□□□ -1.44
LPCAT3-208ENST00000538987 ZFP2Q6ZN57 461 aa6.08□□□□□ -1.44
LPCAT3-208ENST00000538987 POM121L12Q8N7R1 296 aa6.08□□□□□ -1.44
LPCAT3-208ENST00000538987 CNFNQ9BYD5 112 aa6.08□□□□□ -1.44
LPCAT3-208ENST00000538987 DPH3P1Q9H4G8 78 aa6.08□□□□□ -1.44
LPCAT3-208ENST00000538987 SMCO4Q9NRQ5 59 aa6.08□□□□□ -1.44
LPCAT3-208ENST00000538987 TRAV26-1A0A087WT03 109 aa6.07□□□□□ -1.44
LPCAT3-208ENST00000538987 IGLL5B9A064 214 aa6.07□□□□□ -1.44
LPCAT3-208ENST00000538987 PAX4O43316 350 aa6.07□□□□□ -1.44
LPCAT3-208ENST00000538987 TMEM88Q6PEY1 159 aa6.07□□□□□ -1.44
LPCAT3-208ENST00000538987 ATP5L2Q7Z4Y8 100 aa6.07□□□□□ -1.44
LPCAT3-208ENST00000538987 MUC7Q8TAX7 377 aa6.07□□□□□ -1.44
LPCAT3-208ENST00000538987 PRADC1Q9BSG0 188 aa6.07□□□□□ -1.44
LPCAT3-208ENST00000538987 TMEM191AQ9H0A3 160 aa6.07□□□□□ -1.44
LPCAT3-208ENST00000538987 PRO0255Q9UI72 69 aa6.07□□□□□ -1.44
LPCAT3-208ENST00000538987 KLK5Q9Y337 293 aaPredicted RBP6.07□□□□□ -1.44
LPCAT3-208ENST00000538987 DNAH9Q9NYC9 4486 aa6.06□□□□□ -1.44
LPCAT3-208ENST00000538987 TRAV9-1A0A075B6T8 112 aa6.06□□□□□ -1.44
LPCAT3-208ENST00000538987 NUPR2A6NF83 97 aa6.06□□□□□ -1.44
LPCAT3-208ENST00000538987 CRYBA4P53673 196 aa6.06□□□□□ -1.44
LPCAT3-208ENST00000538987 CEMP1Q6PRD7 247 aaPredicted RBP6.06□□□□□ -1.44
LPCAT3-208ENST00000538987 CBLN2Q8IUK8 224 aa6.06□□□□□ -1.44
LPCAT3-208ENST00000538987 SLC25A29Q8N8R3 303 aa6.06□□□□□ -1.44
LPCAT3-208ENST00000538987 FAM210BQ96KR6 192 aa6.06□□□□□ -1.44
LPCAT3-208ENST00000538987 HUWE1Q7Z6Z7 4374 aaKnown RBP6.06□□□□□ -1.44
LPCAT3-208ENST00000538987 TGIF2-C20orf24A0A0A6YYL0 155 aa6.05□□□□□ -1.44
LPCAT3-208ENST00000538987 TRBV6-4A0A1B0GX49 114 aa6.05□□□□□ -1.44
LPCAT3-208ENST00000538987 H7C1H1 209 aa6.05□□□□□ -1.44
LPCAT3-208ENST00000538987 NUDT3O95989 172 aa6.05□□□□□ -1.44
LPCAT3-208ENST00000538987 GATA1P15976 413 aaPredicted RBP6.05□□□□□ -1.44
LPCAT3-208ENST00000538987 ELOBQ15370 118 aa6.05□□□□□ -1.44
LPCAT3-208ENST00000538987 Q6ZSN1 163 aa6.05□□□□□ -1.44
LPCAT3-208ENST00000538987 AMN1Q8IY45 258 aa6.05□□□□□ -1.44
LPCAT3-208ENST00000538987 KIF25-AS1Q9Y6Z4 181 aa6.05□□□□□ -1.44
LPCAT3-208ENST00000538987 TENM3Q9P273 2699 aa6.05□□□□□ -1.44
LPCAT3-208ENST00000538987 COL7A1Q02388 2944 aa6.04□□□□□ -1.44
LPCAT3-208ENST00000538987 TRAV26-2A0A0B4J265 109 aa6.04□□□□□ -1.44
LPCAT3-208ENST00000538987 A0A1B0GXF2 115 aa6.04□□□□□ -1.44
LPCAT3-208ENST00000538987 K7EQD1 137 aa6.04□□□□□ -1.44
LPCAT3-208ENST00000538987 SCO1O75880 301 aa6.04□□□□□ -1.44
LPCAT3-208ENST00000538987 GYPEP15421 78 aa6.04□□□□□ -1.44
LPCAT3-208ENST00000538987 RAB4AP20338 218 aa6.04□□□□□ -1.44
LPCAT3-208ENST00000538987 RHOHQ15669 191 aa6.04□□□□□ -1.44
LPCAT3-208ENST00000538987 SUMO4Q6EEV6 95 aa6.04□□□□□ -1.44
LPCAT3-208ENST00000538987 UFSP1Q6NVU6 142 aa6.04□□□□□ -1.44
LPCAT3-208ENST00000538987 RASL11AQ6T310 242 aa6.04□□□□□ -1.44
LPCAT3-208ENST00000538987 PRKDCP78527 4128 aaKnown RBP6.04□□□□□ -1.44
LPCAT3-208ENST00000538987 MUC4Q99102 2169 aa6.04□□□□□ -1.44
LPCAT3-208ENST00000538987 A0A096LPF7 62 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 GAGE12JA6NER3 117 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 P0DMU3 169 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 FAM231AP0DMU4 169 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 FAM231CP0DMU5 169 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 SRIP30626 198 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 CKS2P33552 79 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 LINC00315P59091 139 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 RPL36AP83881 106 aaKnown RBP6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 GAGE1Q13065 139 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 GAGE4Q13068 117 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 GAGE5Q13069 117 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 MRPL23Q16540 153 aaKnown RBP6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 COX19Q49B96 90 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 GAGE13Q4V321 117 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 FAM104BQ5XKR9 115 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 C15orf53Q8NAA6 179 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 ZNRF2Q8NHG8 242 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 FRZBQ92765 325 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 RPL36ALQ969Q0 106 aaKnown RBP6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 VSIG2Q96IQ7 327 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 TNFRSF18Q9Y5U5 241 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 ICOSQ9Y6W8 199 aa6.03□□□□□ -1.44
LPCAT3-208ENST00000538987 TRBV24-1A0A075B6N3 115 aa6.02□□□□□ -1.45
LPCAT3-208ENST00000538987 LOC100131303A0A0U1RQF7 123 aa6.02□□□□□ -1.45
LPCAT3-208ENST00000538987 SMKR1H3BMG3 65 aa6.02□□□□□ -1.45
LPCAT3-208ENST00000538987 H3BNG1 76 aa6.02□□□□□ -1.45
LPCAT3-208ENST00000538987 C3orf84H3BNL1 204 aa6.02□□□□□ -1.45
LPCAT3-208ENST00000538987 M0QY20 66 aa6.02□□□□□ -1.45
LPCAT3-208ENST00000538987 APCSP02743 223 aa6.02□□□□□ -1.45
LPCAT3-208ENST00000538987 FABP9Q0Z7S8 132 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms