RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 NKX6-2Q9C056 277 aaPredicted RBP8.25□□□□□ -1.09
VAMP1-206ENST00000538970 FXYD6-FXYD2A0A087WZ82 144 aa8.24□□□□□ -1.09
VAMP1-206ENST00000538970 GRIFINA4D1Z8 144 aa8.24□□□□□ -1.09
VAMP1-206ENST00000538970 SH2D1AO60880 128 aa8.24□□□□□ -1.09
VAMP1-206ENST00000538970 FAM74A4Q5TZK3 123 aa8.24□□□□□ -1.09
VAMP1-206ENST00000538970 NIT1Q86X76 327 aa8.24□□□□□ -1.09
VAMP1-206ENST00000538970 BAALCQ8WXS3 180 aa8.24□□□□□ -1.09
VAMP1-206ENST00000538970 ZFP30Q9Y2G7 519 aa8.24□□□□□ -1.09
VAMP1-206ENST00000538970 COX11Q9Y6N1 276 aa8.24□□□□□ -1.09
VAMP1-206ENST00000538970 A0A087WWL8 130 aa8.23□□□□□ -1.09
VAMP1-206ENST00000538970 LINC01559Q495D7 138 aa8.23□□□□□ -1.09
VAMP1-206ENST00000538970 AKR1C8PQ5T2L2 129 aa8.23□□□□□ -1.09
VAMP1-206ENST00000538970 FAM162BQ5T6X4 162 aa8.23□□□□□ -1.09
VAMP1-206ENST00000538970 LINC00528Q8N1L1 170 aa8.23□□□□□ -1.09
VAMP1-206ENST00000538970 RMI2Q96E14 147 aa8.23□□□□□ -1.09
VAMP1-206ENST00000538970 SFRP2Q96HF1 295 aa8.23□□□□□ -1.09
VAMP1-206ENST00000538970 FMC1Q96HJ9 113 aa8.23□□□□□ -1.09
VAMP1-206ENST00000538970 DNAJC30Q96LL9 226 aa8.23□□□□□ -1.09
VAMP1-206ENST00000538970 URGCP-MRPS24S4R325 110 aa8.23□□□□□ -1.09
VAMP1-206ENST00000538970 TRBV6-1A0A0K0K1D8 114 aa8.22□□□□□ -1.09
VAMP1-206ENST00000538970 MAP1LC3B2A6NCE7 125 aa8.22□□□□□ -1.09
VAMP1-206ENST00000538970 M0R381 172 aa8.22□□□□□ -1.09
VAMP1-206ENST00000538970 PLA2G1BP04054 148 aaKnown RBP8.22□□□□□ -1.09
VAMP1-206ENST00000538970 SEC11BP0C7V7 166 aa8.22□□□□□ -1.09
VAMP1-206ENST00000538970 TPT1P13693 172 aaKnown RBP8.22□□□□□ -1.09
VAMP1-206ENST00000538970 UBE2G1P62253 170 aa8.22□□□□□ -1.09
VAMP1-206ENST00000538970 ZNF674Q2M3X9 581 aa8.22□□□□□ -1.09
VAMP1-206ENST00000538970 MAP1LC3BQ9GZQ8 125 aa8.22□□□□□ -1.09
VAMP1-206ENST00000538970 PHLDA3Q9Y5J5 127 aa8.22□□□□□ -1.09
VAMP1-206ENST00000538970 IGKV2D-24A0A075B6R9 120 aa8.21□□□□□ -1.1
VAMP1-206ENST00000538970 TMSB15BA0A087X1C1 80 aa8.21□□□□□ -1.1
VAMP1-206ENST00000538970 TRBV10-1A0A0K0K1A3 114 aa8.21□□□□□ -1.1
VAMP1-206ENST00000538970 G3V3Q6 166 aa8.21□□□□□ -1.1
VAMP1-206ENST00000538970 LTAP01374 205 aa8.21□□□□□ -1.1
VAMP1-206ENST00000538970 LINC01620Q4KN68 170 aa8.21□□□□□ -1.1
VAMP1-206ENST00000538970 SCXQ7RTU7 201 aa8.21□□□□□ -1.1
VAMP1-206ENST00000538970 ZFP82Q8N141 532 aa8.21□□□□□ -1.1
VAMP1-206ENST00000538970 TCEAL7Q9BRU2 100 aa8.21□□□□□ -1.1
VAMP1-206ENST00000538970 CHCHD7Q9BUK0 85 aa8.21□□□□□ -1.1
VAMP1-206ENST00000538970 BATF3Q9NR55 127 aa8.21□□□□□ -1.1
VAMP1-206ENST00000538970 KLK12Q9UKR0 248 aa8.21□□□□□ -1.1
VAMP1-206ENST00000538970 RBFOX3A6NFN3 312 aa8.2□□□□□ -1.1
VAMP1-206ENST00000538970 FHITP49789 147 aa8.2□□□□□ -1.1
VAMP1-206ENST00000538970 UBE2D3P61077 147 aa8.2□□□□□ -1.1
VAMP1-206ENST00000538970 UBE2D2P62837 147 aa8.2□□□□□ -1.1
VAMP1-206ENST00000538970 ATRAIDQ6UW56 229 aa8.2□□□□□ -1.1
VAMP1-206ENST00000538970 Q8N976 141 aa8.2□□□□□ -1.1
VAMP1-206ENST00000538970 CYTL1Q9NRR1 136 aa8.2□□□□□ -1.1
VAMP1-206ENST00000538970 A0A087WX48 190 aa8.19□□□□□ -1.1
VAMP1-206ENST00000538970 RPL36AP83881 106 aaKnown RBP8.19□□□□□ -1.1
VAMP1-206ENST00000538970 ELOBQ15370 118 aa8.19□□□□□ -1.1
VAMP1-206ENST00000538970 RPL36ALQ969Q0 106 aaKnown RBP8.19□□□□□ -1.1
VAMP1-206ENST00000538970 UBE2WQ96B02 151 aa8.19□□□□□ -1.1
VAMP1-206ENST00000538970 TRBV7-3A0A075B6L6 115 aa8.18□□□□□ -1.1
VAMP1-206ENST00000538970 KRTAP29-1A8MX34 341 aaPredicted RBP8.18□□□□□ -1.1
VAMP1-206ENST00000538970 ARPC5O15511 151 aa8.18□□□□□ -1.1
VAMP1-206ENST00000538970 AKR1C3P42330 323 aa8.18□□□□□ -1.1
VAMP1-206ENST00000538970 SERTAD4-AS1Q5TG53 156 aa8.18□□□□□ -1.1
VAMP1-206ENST00000538970 CST9LP1Q5W188 147 aa8.18□□□□□ -1.1
VAMP1-206ENST00000538970 OR10G8Q8NGN5 311 aa8.18□□□□□ -1.1
VAMP1-206ENST00000538970 DEFB104AQ8WTQ1 72 aa8.18□□□□□ -1.1
VAMP1-206ENST00000538970 KCNIP4Q6PIL6 250 aa8.17□□□□□ -1.1
VAMP1-206ENST00000538970 STOML3Q8TAV4 291 aa8.17□□□□□ -1.1
VAMP1-206ENST00000538970 CHAC1Q9BUX1 264 aa8.17□□□□□ -1.1
VAMP1-206ENST00000538970 TRBV6-8A0A0A6YYG3 113 aa8.16□□□□□ -1.1
VAMP1-206ENST00000538970 PAGE4O60829 102 aa8.16□□□□□ -1.1
VAMP1-206ENST00000538970 CXCL1P09341 107 aa8.16□□□□□ -1.1
VAMP1-206ENST00000538970 KRTAP10-4P60372 401 aaPredicted RBP8.16□□□□□ -1.1
VAMP1-206ENST00000538970 RAB4BP61018 213 aa8.16□□□□□ -1.1
VAMP1-206ENST00000538970 RPL19P84098 196 aaKnown RBP8.16□□□□□ -1.1
VAMP1-206ENST00000538970 Q0VG73 95 aa8.16□□□□□ -1.1
VAMP1-206ENST00000538970 ZNF56Q15929 161 aa8.16□□□□□ -1.1
VAMP1-206ENST00000538970 PRR27Q6MZM9 219 aa8.16□□□□□ -1.1
VAMP1-206ENST00000538970 OR10AG1Q8NH19 301 aa8.16□□□□□ -1.1
VAMP1-206ENST00000538970 MPV17L2Q567V2 206 aa8.15□□□□□ -1.1
VAMP1-206ENST00000538970 ENHOQ6UWT2 76 aa8.15□□□□□ -1.1
VAMP1-206ENST00000538970 NEXN-AS1Q8NBZ9 246 aa8.15□□□□□ -1.1
VAMP1-206ENST00000538970 CIRBP-AS1Q8TBR5 109 aa8.15□□□□□ -1.1
VAMP1-206ENST00000538970 C1orf43Q9BWL3 253 aa8.15□□□□□ -1.1
VAMP1-206ENST00000538970 PLA2G2DQ9UNK4 145 aa8.15□□□□□ -1.1
VAMP1-206ENST00000538970 SCO2A0A1W2PP80 73 aa8.14□□□□□ -1.11
VAMP1-206ENST00000538970 TMEM262E9PQX1 116 aa8.14□□□□□ -1.11
VAMP1-206ENST00000538970 SNAI2O43623 268 aa8.14□□□□□ -1.11
VAMP1-206ENST00000538970 CRPP02741 224 aa8.14□□□□□ -1.11
VAMP1-206ENST00000538970 S100A9P06702 114 aaKnown RBP8.14□□□□□ -1.11
VAMP1-206ENST00000538970 C14orf177Q52M58 125 aa8.14□□□□□ -1.11
VAMP1-206ENST00000538970 C15orf54Q8N8G6 183 aa8.14□□□□□ -1.11
VAMP1-206ENST00000538970 MLST8Q9BVC4 326 aa8.14□□□□□ -1.11
VAMP1-206ENST00000538970 ZNF471Q9BX82 626 aaPredicted RBP8.14□□□□□ -1.11
VAMP1-206ENST00000538970 LRP1Q07954 4544 aaKnown RBP8.13□□□□□ -1.11
VAMP1-206ENST00000538970 SMLR1H3BR10 107 aa8.13□□□□□ -1.11
VAMP1-206ENST00000538970 FAM213BQ8TBF2 198 aa8.13□□□□□ -1.11
VAMP1-206ENST00000538970 SFT2D1Q8WV19 159 aa8.13□□□□□ -1.11
VAMP1-206ENST00000538970 MBD3L1Q8WWY6 194 aa8.13□□□□□ -1.11
VAMP1-206ENST00000538970 SSBP4Q9BWG4 385 aaPredicted RBP8.13□□□□□ -1.11
VAMP1-206ENST00000538970 MUC21A0A0G2JKD1 596 aa8.12□□□□□ -1.11
VAMP1-206ENST00000538970 MUC21A0A140T8X8 626 aa8.12□□□□□ -1.11
VAMP1-206ENST00000538970 A0A1B0GV50 99 aa8.12□□□□□ -1.11
VAMP1-206ENST00000538970 PFDN1O60925 122 aa8.12□□□□□ -1.11
VAMP1-206ENST00000538970 IGLV2-8P01709 118 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms