RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 C14orf178Q8N769 122 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-209ENST00000538654 METTL26Q96S19 204 aa6.83□□□□□ -1.32
SNHG1-209ENST00000538654 IGIPA6NJ69 53 aa6.82□□□□□ -1.32
SNHG1-209ENST00000538654 OOSP1A8MZH6 123 aa6.82□□□□□ -1.32
SNHG1-209ENST00000538654 CCDC179H3BU77 68 aa6.82□□□□□ -1.32
SNHG1-209ENST00000538654 DUSP14O95147 198 aaKnown RBP6.82□□□□□ -1.32
SNHG1-209ENST00000538654 NDPQ00604 133 aa6.82□□□□□ -1.32
SNHG1-209ENST00000538654 TMEM170BQ5T4T1 132 aa6.82□□□□□ -1.32
SNHG1-209ENST00000538654 Q6ZS46 218 aa6.82□□□□□ -1.32
SNHG1-209ENST00000538654 NTN5Q8WTR8 489 aaPredicted RBP6.82□□□□□ -1.32
SNHG1-209ENST00000538654 TMEM263Q8WUH6 116 aaKnown RBP6.82□□□□□ -1.32
SNHG1-209ENST00000538654 IGHV3OR16-8A0A075B7F1 116 aa6.82□□□□□ -1.32
SNHG1-209ENST00000538654 ELANEP08246 267 aa6.82□□□□□ -1.32
SNHG1-209ENST00000538654 C15orf32Q32M92 178 aa6.82□□□□□ -1.32
SNHG1-209ENST00000538654 POM121L12Q8N7R1 296 aa6.82□□□□□ -1.32
SNHG1-209ENST00000538654 TP53TG1Q9Y2A0 90 aa6.82□□□□□ -1.32
SNHG1-209ENST00000538654 TRBV10-2A0A0K0K1G8 114 aa6.81□□□□□ -1.32
SNHG1-209ENST00000538654 E7EQL1 145 aa6.81□□□□□ -1.32
SNHG1-209ENST00000538654 M0R1W7 72 aa6.81□□□□□ -1.32
SNHG1-209ENST00000538654 KLK9Q2XQG4 91 aa6.81□□□□□ -1.32
SNHG1-209ENST00000538654 TRPT1Q86TN4 253 aaKnown RBP6.81□□□□□ -1.32
SNHG1-209ENST00000538654 KLK9Q9UKQ9 250 aa6.81□□□□□ -1.32
SNHG1-209ENST00000538654 IGHV4OR15-8A0A075B7B6 117 aa6.81□□□□□ -1.32
SNHG1-209ENST00000538654 A0A087WW49 117 aa6.81□□□□□ -1.32
SNHG1-209ENST00000538654 IGHV3-35A0A0C4DH35 117 aa6.81□□□□□ -1.32
SNHG1-209ENST00000538654 ODF3BA8MYP8 253 aa6.81□□□□□ -1.32
SNHG1-209ENST00000538654 H3BMM0 161 aa6.81□□□□□ -1.32
SNHG1-209ENST00000538654 Q1RN00 199 aa6.81□□□□□ -1.32
SNHG1-209ENST00000538654 APRG1Q8IVJ8 170 aa6.81□□□□□ -1.32
SNHG1-209ENST00000538654 C15orf53Q8NAA6 179 aa6.81□□□□□ -1.32
SNHG1-209ENST00000538654 UBE2WQ96B02 151 aa6.81□□□□□ -1.32
SNHG1-209ENST00000538654 A0A0G2JNJ9 132 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 CLPSL1A2RUU4 121 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 LEPROTO15243 131 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 CRLF1O75462 422 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 TSHBP01222 138 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 TSPEAR-AS2P59090 65 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 ZNF876PQ49A33 203 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 GPHB5Q86YW7 130 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 ZNF843Q8N446 348 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 Q8N6K4 173 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 AMELXQ99217 191 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 Q9UFV3 132 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 ZNF318Q5VUA4 2279 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 TRAV2A0A0B4J234 112 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 TRBV30A0A0K0K1B3 111 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 CRIP2P52943 208 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-209ENST00000538654 EBI3Q14213 229 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 ODF3Q96PU9 254 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 SPANXDQ9BXN6 97 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 TMEM126AQ9H061 195 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 IGHV3-66A0A0C4DH42 116 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 FAM240AA0A1B0GVK7 77 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 LGALS9O00182 355 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 OVOL1O14753 267 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 MDFICQ9P1T7 246 aa6.8□□□□□ -1.32
SNHG1-209ENST00000538654 TRBV7-1A0A0A6YYK4 115 aa6.79□□□□□ -1.32
SNHG1-209ENST00000538654 IGHV7-81A0A0B4J1V7 117 aa6.79□□□□□ -1.32
SNHG1-209ENST00000538654 A0A0J9YX75 114 aa6.79□□□□□ -1.32
SNHG1-209ENST00000538654 M0R2P5 195 aa6.79□□□□□ -1.32
SNHG1-209ENST00000538654 PRR9Q5T870 116 aa6.79□□□□□ -1.32
SNHG1-209ENST00000538654 EEF1AKMT3Q96AZ1 226 aa6.79□□□□□ -1.32
SNHG1-209ENST00000538654 SDHAF1A6NFY7 115 aa6.79□□□□□ -1.32
SNHG1-209ENST00000538654 H3BT86 120 aa6.79□□□□□ -1.32
SNHG1-209ENST00000538654 NXPH4O95158 308 aa6.79□□□□□ -1.32
SNHG1-209ENST00000538654 EMP1P54849 157 aa6.79□□□□□ -1.32
SNHG1-209ENST00000538654 ANXA2RQ3ZCQ2 193 aa6.79□□□□□ -1.32
SNHG1-209ENST00000538654 Q6ZQT7 251 aa6.79□□□□□ -1.32
SNHG1-209ENST00000538654 DUX3Q96PT4 197 aa6.79□□□□□ -1.32
SNHG1-209ENST00000538654 IGHV1-69P01742 117 aa6.78□□□□□ -1.32
SNHG1-209ENST00000538654 COX6CP09669 75 aa6.78□□□□□ -1.32
SNHG1-209ENST00000538654 POLR2KP53803 58 aaKnown RBP6.78□□□□□ -1.32
SNHG1-209ENST00000538654 MEIG1Q5JSS6 88 aa6.78□□□□□ -1.32
SNHG1-209ENST00000538654 MINOS1Q5TGZ0 78 aa6.78□□□□□ -1.32
SNHG1-209ENST00000538654 ZFAND2AQ8N6M9 145 aa6.78□□□□□ -1.32
SNHG1-209ENST00000538654 ZNRF2Q8NHG8 242 aa6.78□□□□□ -1.32
SNHG1-209ENST00000538654 ITLN2Q8WWU7 325 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-209ENST00000538654 MINOS1-NBL1R4GNA1 71 aa6.78□□□□□ -1.32
SNHG1-209ENST00000538654 CUL9Q8IWT3 2517 aa6.78□□□□□ -1.32
SNHG1-209ENST00000538654 TEX49A0A1B0GTD5 131 aa6.78□□□□□ -1.32
SNHG1-209ENST00000538654 LYNX1G3V0Z9 82 aa6.78□□□□□ -1.32
SNHG1-209ENST00000538654 H7C2G1 150 aa6.78□□□□□ -1.32
SNHG1-209ENST00000538654 LYNX1P0DP58 116 aa6.78□□□□□ -1.32
SNHG1-209ENST00000538654 C2orf82Q6UX34 121 aa6.78□□□□□ -1.32
SNHG1-209ENST00000538654 CLEC19AQ6UXS0 136 aa6.78□□□□□ -1.32
SNHG1-209ENST00000538654 MUSTN1Q8IVN3 82 aa6.78□□□□□ -1.32
SNHG1-209ENST00000538654 TMEM223A0PJW6 202 aa6.77□□□□□ -1.33
SNHG1-209ENST00000538654 IGHV4-39P01824 125 aa6.77□□□□□ -1.33
SNHG1-209ENST00000538654 IGHV3OR16-13A0A075B7E8 117 aa6.77□□□□□ -1.33
SNHG1-209ENST00000538654 IGHV3-74A0A0B4J1X5 117 aa6.77□□□□□ -1.33
SNHG1-209ENST00000538654 VMO1Q7Z5L0 202 aa6.77□□□□□ -1.33
SNHG1-209ENST00000538654 Q9UF83 564 aa6.77□□□□□ -1.33
SNHG1-209ENST00000538654 ECSCRQ19T08 205 aa6.76□□□□□ -1.33
SNHG1-209ENST00000538654 LCE2DQ5TA82 110 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-209ENST00000538654 Q8N9W7 124 aa6.76□□□□□ -1.33
SNHG1-209ENST00000538654 KIF25-AS1Q9Y6Z4 181 aa6.76□□□□□ -1.33
SNHG1-209ENST00000538654 TRBV6-5A0A0K0K1A5 114 aa6.76□□□□□ -1.33
SNHG1-209ENST00000538654 TRBV27A0A0K0K1C4 114 aa6.76□□□□□ -1.33
SNHG1-209ENST00000538654 EIF4EBP3O60516 100 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-209ENST00000538654 RPL39P62891 51 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms