RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 SPATA45Q537H7 98 aa10.35□□□□□ -0.75
ACTN1-205ENST00000538545 SVIPQ8NHG7 77 aa10.35□□□□□ -0.75
ACTN1-205ENST00000538545 ODF3Q96PU9 254 aa10.35□□□□□ -0.75
ACTN1-205ENST00000538545 C14orf144Q96I85 54 aa10.34□□□□□ -0.75
ACTN1-205ENST00000538545 IGLV2-18A0A075B6J9 118 aa10.34□□□□□ -0.75
ACTN1-205ENST00000538545 PPBPP02775 128 aa10.34□□□□□ -0.75
ACTN1-205ENST00000538545 ZNF705AQ6ZN79 300 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-205ENST00000538545 AP1S3Q96PC3 154 aa10.34□□□□□ -0.75
ACTN1-205ENST00000538545 JMJD8Q96S16 334 aa10.34□□□□□ -0.75
ACTN1-205ENST00000538545 KIF25-AS1Q9Y6Z4 181 aa10.34□□□□□ -0.75
ACTN1-205ENST00000538545 KIR2DL5BA0A0G2JN68 375 aa10.34□□□□□ -0.75
ACTN1-205ENST00000538545 KIR2DL5BA0A0G2JPC4 375 aa10.34□□□□□ -0.75
ACTN1-205ENST00000538545 ZNF876PQ49A33 203 aa10.34□□□□□ -0.75
ACTN1-205ENST00000538545 KIR2DL5AQ8N109 375 aa10.34□□□□□ -0.75
ACTN1-205ENST00000538545 TMEM158Q8WZ71 300 aa10.34□□□□□ -0.75
ACTN1-205ENST00000538545 C9orf85Q96MD7 179 aa10.34□□□□□ -0.75
ACTN1-205ENST00000538545 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.33□□□□□ -0.76
ACTN1-205ENST00000538545 MAP1LC3CQ9BXW4 147 aa10.33□□□□□ -0.76
ACTN1-205ENST00000538545 OR11H12B2RN74 326 aa10.33□□□□□ -0.76
ACTN1-205ENST00000538545 PF4P02776 101 aa10.33□□□□□ -0.76
ACTN1-205ENST00000538545 RPL35AP18077 110 aaKnown RBP10.33□□□□□ -0.76
ACTN1-205ENST00000538545 AZU1P20160 251 aa10.33□□□□□ -0.76
ACTN1-205ENST00000538545 STHQ8IWL8 128 aa10.33□□□□□ -0.76
ACTN1-205ENST00000538545 LINC01587Q99440 93 aa10.33□□□□□ -0.76
ACTN1-205ENST00000538545 HBDP02042 147 aa10.32□□□□□ -0.76
ACTN1-205ENST00000538545 IGLL1P15814 213 aa10.32□□□□□ -0.76
ACTN1-205ENST00000538545 Q9UF83 564 aa10.32□□□□□ -0.76
ACTN1-205ENST00000538545 DEFA6Q01524 100 aa10.32□□□□□ -0.76
ACTN1-205ENST00000538545 SUMO4Q6EEV6 95 aa10.32□□□□□ -0.76
ACTN1-205ENST00000538545 CRLF1O75462 422 aa10.31□□□□□ -0.76
ACTN1-205ENST00000538545 SMIM17P0DL12 118 aa10.31□□□□□ -0.76
ACTN1-205ENST00000538545 MAST4O15021 2626 aa10.31□□□□□ -0.76
ACTN1-205ENST00000538545 PKD1L1Q8TDX9 2849 aa10.31□□□□□ -0.76
ACTN1-205ENST00000538545 IGLV1-51P01701 117 aa10.31□□□□□ -0.76
ACTN1-205ENST00000538545 P0DMU3 169 aa10.31□□□□□ -0.76
ACTN1-205ENST00000538545 FAM231AP0DMU4 169 aa10.31□□□□□ -0.76
ACTN1-205ENST00000538545 FAM231CP0DMU5 169 aa10.31□□□□□ -0.76
ACTN1-205ENST00000538545 ZNF56Q15929 161 aa10.31□□□□□ -0.76
ACTN1-205ENST00000538545 HSPB8Q9UJY1 196 aa10.31□□□□□ -0.76
ACTN1-205ENST00000538545 NXPH4O95158 308 aa10.3□□□□□ -0.76
ACTN1-205ENST00000538545 MED14OSP0DP75 135 aa10.3□□□□□ -0.76
ACTN1-205ENST00000538545 CRYGDP07320 174 aa10.3□□□□□ -0.76
ACTN1-205ENST00000538545 SUMO2P61956 95 aaKnown RBP10.3□□□□□ -0.76
ACTN1-205ENST00000538545 Q8N8P6 123 aa10.3□□□□□ -0.76
ACTN1-205ENST00000538545 TMEM208Q9BTX3 173 aa10.3□□□□□ -0.76
ACTN1-205ENST00000538545 TRAV2A0A0B4J234 112 aa10.29□□□□□ -0.76
ACTN1-205ENST00000538545 A8MTW9 85 aa10.29□□□□□ -0.76
ACTN1-205ENST00000538545 IFI27L1Q96BM0 104 aa10.29□□□□□ -0.76
ACTN1-205ENST00000538545 MRAP2Q96G30 205 aa10.29□□□□□ -0.76
ACTN1-205ENST00000538545 SMIM2Q9BVW6 85 aa10.29□□□□□ -0.76
ACTN1-205ENST00000538545 NXT2Q9NPJ8 142 aaKnown RBP10.29□□□□□ -0.76
ACTN1-205ENST00000538545 MRPL16Q9NX20 251 aaKnown RBP10.29□□□□□ -0.76
ACTN1-205ENST00000538545 DKK2Q9UBU2 259 aa10.29□□□□□ -0.76
ACTN1-205ENST00000538545 C1orf158Q8N1D5 194 aa10.29□□□□□ -0.76
ACTN1-205ENST00000538545 MORN3Q6PF18 240 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-205ENST00000538545 CSTL1Q9H114 145 aa10.28□□□□□ -0.76
ACTN1-205ENST00000538545 TRAV25A0A0B4J276 109 aa10.28□□□□□ -0.76
ACTN1-205ENST00000538545 EREGO14944 169 aa10.28□□□□□ -0.76
ACTN1-205ENST00000538545 TRPT1Q86TN4 253 aaKnown RBP10.28□□□□□ -0.76
ACTN1-205ENST00000538545 DEFB125Q8N687 156 aa10.28□□□□□ -0.76
ACTN1-205ENST00000538545 NDUFAF3Q9BU61 184 aa10.28□□□□□ -0.76
ACTN1-205ENST00000538545 C19orf73Q9NVV2 129 aa10.28□□□□□ -0.76
ACTN1-205ENST00000538545 LAMTOR2Q9Y2Q5 125 aa10.28□□□□□ -0.76
ACTN1-205ENST00000538545 FCER1GP30273 86 aa10.27□□□□□ -0.77
ACTN1-205ENST00000538545 NDUFA11Q86Y39 141 aa10.27□□□□□ -0.77
ACTN1-205ENST00000538545 LINC00482Q8N8I6 264 aa10.27□□□□□ -0.77
ACTN1-205ENST00000538545 C20orf144Q9BQM9 153 aa10.27□□□□□ -0.77
ACTN1-205ENST00000538545 TRAV9-2A0A087WT02 112 aa10.27□□□□□ -0.77
ACTN1-205ENST00000538545 NUDT3O95989 172 aa10.27□□□□□ -0.77
ACTN1-205ENST00000538545 GIG44P09565 113 aaPredicted RBP10.27□□□□□ -0.77
ACTN1-205ENST00000538545 LAGE3Q14657 143 aa10.27□□□□□ -0.77
ACTN1-205ENST00000538545 STPG4Q8N801 248 aa10.27□□□□□ -0.77
ACTN1-205ENST00000538545 TRGV11A0A075B6L2 103 aa10.26□□□□□ -0.77
ACTN1-205ENST00000538545 LINC01545Q5VT33 79 aa10.26□□□□□ -0.77
ACTN1-205ENST00000538545 INSP01308 110 aa10.26□□□□□ -0.77
ACTN1-205ENST00000538545 IGLC3P0DOY3 106 aa10.26□□□□□ -0.77
ACTN1-205ENST00000538545 PET117Q6UWS5 81 aa10.26□□□□□ -0.77
ACTN1-205ENST00000538545 Q6ZSN1 163 aa10.26□□□□□ -0.77
ACTN1-205ENST00000538545 C11orf72Q8NBR9 251 aa10.25□□□□□ -0.77
ACTN1-205ENST00000538545 COL6A5A8TX70 2615 aa10.25□□□□□ -0.77
ACTN1-205ENST00000538545 PRSS1P07477 247 aa10.25□□□□□ -0.77
ACTN1-205ENST00000538545 SYT8Q8NBV8 401 aa10.25□□□□□ -0.77
ACTN1-205ENST00000538545 ZC2HC1BQ5TFG8 222 aa10.25□□□□□ -0.77
ACTN1-205ENST00000538545 MIEN1Q9BRT3 115 aa10.25□□□□□ -0.77
ACTN1-205ENST00000538545 SDHAF1A6NFY7 115 aa10.24□□□□□ -0.77
ACTN1-205ENST00000538545 RPL39P62891 51 aaKnown RBP10.24□□□□□ -0.77
ACTN1-205ENST00000538545 BATFQ16520 125 aa10.24□□□□□ -0.77
ACTN1-205ENST00000538545 LINC01546A6NGU7 62 aa10.24□□□□□ -0.77
ACTN1-205ENST00000538545 M0QY20 66 aa10.24□□□□□ -0.77
ACTN1-205ENST00000538545 SNHG12Q9BXW3 62 aa10.24□□□□□ -0.77
ACTN1-205ENST00000538545 C20orf202A1L168 122 aa10.23□□□□□ -0.77
ACTN1-205ENST00000538545 BEAN1Q3B7T3 259 aa10.23□□□□□ -0.77
ACTN1-205ENST00000538545 Q6ZN92 141 aa10.23□□□□□ -0.77
ACTN1-205ENST00000538545 GOLT1BQ9Y3E0 138 aa10.23□□□□□ -0.77
ACTN1-205ENST00000538545 IGHV3-53P01767 116 aa10.23□□□□□ -0.77
ACTN1-205ENST00000538545 C21orf62-AS1Q17RA5 79 aa10.23□□□□□ -0.77
ACTN1-205ENST00000538545 ST20Q9HBF5 79 aa10.23□□□□□ -0.77
ACTN1-205ENST00000538545 ANKRD39Q53RE8 183 aa10.22□□□□□ -0.77
ACTN1-205ENST00000538545 POM121L12Q8N7R1 296 aa10.22□□□□□ -0.77
ACTN1-205ENST00000538545 M0R2P5 195 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms