RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 CHTOPQ9Y3Y2 248 aaKnown RBP18.5■□□□□ 0.55
RAB40C-204ENST00000538492 TRAV12-1A0A0B4J245 112 aa18.49■□□□□ 0.55
RAB40C-204ENST00000538492 SLURP1P55000 103 aa18.49■□□□□ 0.55
RAB40C-204ENST00000538492 CHAC1Q9BUX1 264 aa18.49■□□□□ 0.55
RAB40C-204ENST00000538492 APCP25054 2843 aa18.49■□□□□ 0.55
RAB40C-204ENST00000538492 TCTEX1D4Q5JR98 221 aa18.49■□□□□ 0.55
RAB40C-204ENST00000538492 MAPKAPK5-AS1Q8N8E1 139 aa18.49■□□□□ 0.55
RAB40C-204ENST00000538492 NEXN-AS1Q8NBZ9 246 aa18.49■□□□□ 0.55
RAB40C-204ENST00000538492 GCSHP23434 173 aa18.48■□□□□ 0.55
RAB40C-204ENST00000538492 PRRC2AP48634 2157 aaKnown RBP18.48■□□□□ 0.55
RAB40C-204ENST00000538492 BAALCQ8WXS3 180 aa18.48■□□□□ 0.55
RAB40C-204ENST00000538492 H3BRM9 83 aa18.47■□□□□ 0.55
RAB40C-204ENST00000538492 C9orf85Q96MD7 179 aa18.47■□□□□ 0.55
RAB40C-204ENST00000538492 HIGD1BQ9P298 99 aa18.46■□□□□ 0.55
RAB40C-204ENST00000538492 H3BUT2 72 aa18.46■□□□□ 0.55
RAB40C-204ENST00000538492 DUSP14O95147 198 aaKnown RBP18.46■□□□□ 0.55
RAB40C-204ENST00000538492 HLA-DRB4P13762 266 aa18.46■□□□□ 0.55
RAB40C-204ENST00000538492 HIST2H2BDQ6DRA6 164 aa18.46■□□□□ 0.55
RAB40C-204ENST00000538492 DUX3Q96PT4 197 aa18.46■□□□□ 0.55
RAB40C-204ENST00000538492 HLA-DRB4X5D2U9 266 aa18.46■□□□□ 0.55
RAB40C-204ENST00000538492 IGHV1OR15-1A0A075B7D0 117 aa18.45■□□□□ 0.54
RAB40C-204ENST00000538492 C9orf118A6NHY6 69 aa18.45■□□□□ 0.54
RAB40C-204ENST00000538492 FXYD2P54710 66 aa18.45■□□□□ 0.54
RAB40C-204ENST00000538492 RNF152Q8N8N0 203 aa18.45■□□□□ 0.54
RAB40C-204ENST00000538492 RNASE8Q8TDE3 154 aaKnown RBP18.45■□□□□ 0.54
RAB40C-204ENST00000538492 JMJD8Q96S16 334 aa18.45■□□□□ 0.54
RAB40C-204ENST00000538492 POLR2KP53803 58 aaKnown RBP18.43■□□□□ 0.54
RAB40C-204ENST00000538492 FOXI2Q6ZQN5 318 aa18.43■□□□□ 0.54
RAB40C-204ENST00000538492 PRSS29PA6NIE9 313 aa18.43■□□□□ 0.54
RAB40C-204ENST00000538492 KNCNA6PVL3 124 aa18.43■□□□□ 0.54
RAB40C-204ENST00000538492 TP53TG1Q9Y2A0 90 aa18.43■□□□□ 0.54
RAB40C-204ENST00000538492 SDHAF1A6NFY7 115 aa18.42■□□□□ 0.54
RAB40C-204ENST00000538492 ZNF56Q15929 161 aa18.42■□□□□ 0.54
RAB40C-204ENST00000538492 KHDC1LQ5JSQ8 128 aa18.42■□□□□ 0.54
RAB40C-204ENST00000538492 ZFP2Q6ZN57 461 aa18.42■□□□□ 0.54
RAB40C-204ENST00000538492 AMTNQ6UX39 209 aa18.42■□□□□ 0.54
RAB40C-204ENST00000538492 CYSLTR1Q9Y271 337 aa18.42■□□□□ 0.54
RAB40C-204ENST00000538492 SONP18583 2426 aaKnown RBP18.42■□□□□ 0.54
RAB40C-204ENST00000538492 RPL39P62891 51 aaKnown RBP18.41■□□□□ 0.54
RAB40C-204ENST00000538492 SYT8Q8NBV8 401 aa18.41■□□□□ 0.54
RAB40C-204ENST00000538492 HTN1P15515 57 aa18.41■□□□□ 0.54
RAB40C-204ENST00000538492 OR11H1Q8NG94 326 aa18.41■□□□□ 0.54
RAB40C-204ENST00000538492 KIR2DL4Q99706 377 aa18.4■□□□□ 0.54
RAB40C-204ENST00000538492 AKAP9Q99996 3911 aa18.4■□□□□ 0.54
RAB40C-204ENST00000538492 GAGE10A6NGK3 116 aa18.4■□□□□ 0.54
RAB40C-204ENST00000538492 VCYO14598 125 aa18.4■□□□□ 0.54
RAB40C-204ENST00000538492 DEFB131AP59861 70 aa18.39■□□□□ 0.54
RAB40C-204ENST00000538492 LRRC75A-AS1Q8N1F1 130 aa18.39■□□□□ 0.54
RAB40C-204ENST00000538492 ZNF256Q9Y2P7 627 aaPredicted RBP18.39■□□□□ 0.54
RAB40C-204ENST00000538492 ITPR3Q14573 2671 aa18.39■□□□□ 0.54
RAB40C-204ENST00000538492 TSHBP01222 138 aa18.39■□□□□ 0.53
RAB40C-204ENST00000538492 CRYGDP07320 174 aa18.39■□□□□ 0.53
RAB40C-204ENST00000538492 RPL32P62910 135 aaKnown RBP18.39■□□□□ 0.53
RAB40C-204ENST00000538492 K7ERJ3 54 aa18.38■□□□□ 0.53
RAB40C-204ENST00000538492 RBMY1A1P0DJD3 496 aaKnown RBP18.38■□□□□ 0.53
RAB40C-204ENST00000538492 RBMY1CP0DJD4 496 aa18.38■□□□□ 0.53
RAB40C-204ENST00000538492 RBMY1FQ15415 496 aaKnown RBP18.38■□□□□ 0.53
RAB40C-204ENST00000538492 ZNF876PQ49A33 203 aa18.38■□□□□ 0.53
RAB40C-204ENST00000538492 KRTAP1-3Q8IUG1 177 aa18.38■□□□□ 0.53
RAB40C-204ENST00000538492 OR11H12B2RN74 326 aa18.37■□□□□ 0.53
RAB40C-204ENST00000538492 EMP1P54849 157 aa18.37■□□□□ 0.53
RAB40C-204ENST00000538492 Q8N2B8 174 aa18.37■□□□□ 0.53
RAB40C-204ENST00000538492 OR11H2Q8NH07 326 aa18.37■□□□□ 0.53
RAB40C-204ENST00000538492 LINC01619G3V211 115 aa18.37■□□□□ 0.53
RAB40C-204ENST00000538492 SMIM13P0DJ93 91 aa18.37■□□□□ 0.53
RAB40C-204ENST00000538492 MORN3Q6PF18 240 aaPredicted RBP18.37■□□□□ 0.53
RAB40C-204ENST00000538492 CEND1Q8N111 149 aa18.37■□□□□ 0.53
RAB40C-204ENST00000538492 M0QY20 66 aa18.37■□□□□ 0.53
RAB40C-204ENST00000538492 GAGE12BA1L429 117 aa18.36■□□□□ 0.53
RAB40C-204ENST00000538492 IGIPA6NJ69 53 aa18.36■□□□□ 0.53
RAB40C-204ENST00000538492 TMEM61Q8N0U2 210 aa18.36■□□□□ 0.53
RAB40C-204ENST00000538492 NF1P21359 2839 aa18.35■□□□□ 0.53
RAB40C-204ENST00000538492 CUBNO60494 3623 aa18.35■□□□□ 0.53
RAB40C-204ENST00000538492 TRBV27A0A0K0K1C4 114 aa18.35■□□□□ 0.53
RAB40C-204ENST00000538492 NHP2Q9NX24 153 aaKnown RBP18.35■□□□□ 0.53
RAB40C-204ENST00000538492 PRM2P04554 102 aa18.35■□□□□ 0.53
RAB40C-204ENST00000538492 CHD6Q8TD26 2715 aa18.34■□□□□ 0.53
RAB40C-204ENST00000538492 TM2D2Q9BX73 214 aa18.34■□□□□ 0.53
RAB40C-204ENST00000538492 TRBV6-5A0A0K0K1A5 114 aa18.34■□□□□ 0.53
RAB40C-204ENST00000538492 MYMXA0A1B0GTQ4 84 aa18.33■□□□□ 0.52
RAB40C-204ENST00000538492 DLX4Q92988 240 aaPredicted RBP18.33■□□□□ 0.52
RAB40C-204ENST00000538492 PRADC1Q9BSG0 188 aa18.33■□□□□ 0.52
RAB40C-204ENST00000538492 CCDC168Q8NDH2 2452 aa18.33■□□□□ 0.52
RAB40C-204ENST00000538492 TRGV11A0A075B6L2 103 aa18.33■□□□□ 0.52
RAB40C-204ENST00000538492 A0A1W2PPM0 123 aa18.33■□□□□ 0.52
RAB40C-204ENST00000538492 GTF2H5Q6ZYL4 71 aa18.33■□□□□ 0.52
RAB40C-204ENST00000538492 KLHL30-AS1Q8NEE0 82 aa18.33■□□□□ 0.52
RAB40C-204ENST00000538492 HIST1H4GQ99525 98 aa18.33■□□□□ 0.52
RAB40C-204ENST00000538492 CST9LQ9H4G1 147 aa18.33■□□□□ 0.52
RAB40C-204ENST00000538492 UFSP1Q6NVU6 142 aa18.32■□□□□ 0.52
RAB40C-204ENST00000538492 C4orf3Q8WVX3 66 aa18.32■□□□□ 0.52
RAB40C-204ENST00000538492 CD300EQ496F6 205 aaPredicted RBP18.32■□□□□ 0.52
RAB40C-204ENST00000538492 PEMTQ9UBM1 199 aa18.32■□□□□ 0.52
RAB40C-204ENST00000538492 RBMY1BA6NDE4 496 aaKnown RBP18.31■□□□□ 0.52
RAB40C-204ENST00000538492 RBMY1EA6NEQ0 496 aaKnown RBP18.31■□□□□ 0.52
RAB40C-204ENST00000538492 C11orf86A6NJI1 115 aa18.31■□□□□ 0.52
RAB40C-204ENST00000538492 H3BMM0 161 aa18.31■□□□□ 0.52
RAB40C-204ENST00000538492 RBMY1DP0C7P1 496 aaKnown RBP18.31■□□□□ 0.52
RAB40C-204ENST00000538492 IGLV4-69A0A075B6H9 119 aa18.31■□□□□ 0.52
RAB40C-204ENST00000538492 E9PLD3 99 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms