RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 SUMO4Q6EEV6 95 aa10.36□□□□□ -0.75
LIMK1-208ENST00000538333 DUX3Q96PT4 197 aa10.36□□□□□ -0.75
LIMK1-208ENST00000538333 CSTL1Q9H114 145 aa10.36□□□□□ -0.75
LIMK1-208ENST00000538333 TRAV2A0A0B4J234 112 aa10.35□□□□□ -0.75
LIMK1-208ENST00000538333 TRAV12-1A0A0B4J245 112 aa10.35□□□□□ -0.75
LIMK1-208ENST00000538333 TEX29Q8N6K0 151 aa10.35□□□□□ -0.75
LIMK1-208ENST00000538333 PEMTQ9UBM1 199 aa10.35□□□□□ -0.75
LIMK1-208ENST00000538333 MYO9AB2RTY4 2548 aa10.35□□□□□ -0.75
LIMK1-208ENST00000538333 DNAJC9-AS1A6NH13 148 aa10.35□□□□□ -0.75
LIMK1-208ENST00000538333 POLR2KP53803 58 aaKnown RBP10.35□□□□□ -0.75
LIMK1-208ENST00000538333 TMEM97Q5BJF2 176 aa10.35□□□□□ -0.75
LIMK1-208ENST00000538333 ZC2HC1BQ5TFG8 222 aa10.35□□□□□ -0.75
LIMK1-208ENST00000538333 TMEM61Q8N0U2 210 aa10.35□□□□□ -0.75
LIMK1-208ENST00000538333 DLX4Q92988 240 aaPredicted RBP10.35□□□□□ -0.75
LIMK1-208ENST00000538333 KNCNA6PVL3 124 aa10.34□□□□□ -0.75
LIMK1-208ENST00000538333 RBMY1A1P0DJD3 496 aaKnown RBP10.34□□□□□ -0.75
LIMK1-208ENST00000538333 RBMY1CP0DJD4 496 aa10.34□□□□□ -0.75
LIMK1-208ENST00000538333 DEFB131AP59861 70 aa10.34□□□□□ -0.75
LIMK1-208ENST00000538333 RBMY1FQ15415 496 aaKnown RBP10.34□□□□□ -0.75
LIMK1-208ENST00000538333 C2orf66Q6UXQ4 117 aa10.34□□□□□ -0.75
LIMK1-208ENST00000538333 KLHL30-AS1Q8NEE0 82 aa10.34□□□□□ -0.75
LIMK1-208ENST00000538333 SCGB3A1Q96QR1 104 aa10.34□□□□□ -0.75
LIMK1-208ENST00000538333 TMEM160Q9NX00 188 aa10.34□□□□□ -0.75
LIMK1-208ENST00000538333 ITPR2Q14571 2701 aa10.33□□□□□ -0.75
LIMK1-208ENST00000538333 HLA-DRB4P13762 266 aa10.33□□□□□ -0.76
LIMK1-208ENST00000538333 KHDC1LQ5JSQ8 128 aa10.33□□□□□ -0.76
LIMK1-208ENST00000538333 HIST2H2BDQ6DRA6 164 aa10.33□□□□□ -0.76
LIMK1-208ENST00000538333 NEXN-AS1Q8NBZ9 246 aa10.33□□□□□ -0.76
LIMK1-208ENST00000538333 HLA-DRB4X5D2U9 266 aa10.33□□□□□ -0.76
LIMK1-208ENST00000538333 SONP18583 2426 aaKnown RBP10.33□□□□□ -0.76
LIMK1-208ENST00000538333 H3BMM0 161 aa10.33□□□□□ -0.76
LIMK1-208ENST00000538333 CRYGDP07320 174 aa10.33□□□□□ -0.76
LIMK1-208ENST00000538333 KRTAP1-1Q07627 177 aa10.33□□□□□ -0.76
LIMK1-208ENST00000538333 NEGR1Q7Z3B1 354 aa10.33□□□□□ -0.76
LIMK1-208ENST00000538333 GTSCR1Q86UQ5 136 aa10.33□□□□□ -0.76
LIMK1-208ENST00000538333 SYT8Q8NBV8 401 aa10.33□□□□□ -0.76
LIMK1-208ENST00000538333 ESM1Q9NQ30 184 aa10.33□□□□□ -0.76
LIMK1-208ENST00000538333 RBMY1BA6NDE4 496 aaKnown RBP10.32□□□□□ -0.76
LIMK1-208ENST00000538333 RBMY1EA6NEQ0 496 aaKnown RBP10.32□□□□□ -0.76
LIMK1-208ENST00000538333 CBY3A6NI87 242 aa10.32□□□□□ -0.76
LIMK1-208ENST00000538333 F8VRH5 84 aa10.32□□□□□ -0.76
LIMK1-208ENST00000538333 RBMY1DP0C7P1 496 aaKnown RBP10.32□□□□□ -0.76
LIMK1-208ENST00000538333 TTTY13Q9BZ97 58 aa10.32□□□□□ -0.76
LIMK1-208ENST00000538333 FLNBO75369 2602 aaKnown RBP10.32□□□□□ -0.76
LIMK1-208ENST00000538333 CUBNO60494 3623 aa10.32□□□□□ -0.76
LIMK1-208ENST00000538333 TRBV6-5A0A0K0K1A5 114 aa10.32□□□□□ -0.76
LIMK1-208ENST00000538333 PLNP26678 52 aa10.32□□□□□ -0.76
LIMK1-208ENST00000538333 SEC11AP67812 179 aa10.32□□□□□ -0.76
LIMK1-208ENST00000538333 HSD52Q0P140 79 aa10.32□□□□□ -0.76
LIMK1-208ENST00000538333 ZNF124Q15973 351 aa10.32□□□□□ -0.76
LIMK1-208ENST00000538333 PDZD2O15018 2839 aa10.31□□□□□ -0.76
LIMK1-208ENST00000538333 FLNAP21333 2647 aaKnown RBP10.31□□□□□ -0.76
LIMK1-208ENST00000538333 TRGV11A0A075B6L2 103 aa10.31□□□□□ -0.76
LIMK1-208ENST00000538333 F5H697 171 aa10.31□□□□□ -0.76
LIMK1-208ENST00000538333 H7C1H1 209 aa10.31□□□□□ -0.76
LIMK1-208ENST00000538333 DEFB114Q30KQ6 69 aa10.31□□□□□ -0.76
LIMK1-208ENST00000538333 FAM74A4Q5TZK3 123 aa10.31□□□□□ -0.76
LIMK1-208ENST00000538333 MORN3Q6PF18 240 aaPredicted RBP10.31□□□□□ -0.76
LIMK1-208ENST00000538333 ERASQ7Z444 233 aa10.31□□□□□ -0.76
LIMK1-208ENST00000538333 BAALCQ8WXS3 180 aa10.31□□□□□ -0.76
LIMK1-208ENST00000538333 M0QY20 66 aa10.31□□□□□ -0.76
LIMK1-208ENST00000538333 BAHCC1Q9P281 2608 aa10.3□□□□□ -0.76
LIMK1-208ENST00000538333 TRBV27A0A0K0K1C4 114 aa10.3□□□□□ -0.76
LIMK1-208ENST00000538333 SDHAF1A6NFY7 115 aa10.3□□□□□ -0.76
LIMK1-208ENST00000538333 VCYO14598 125 aa10.3□□□□□ -0.76
LIMK1-208ENST00000538333 CCL25O15444 150 aa10.3□□□□□ -0.76
LIMK1-208ENST00000538333 ZFP2Q6ZN57 461 aa10.3□□□□□ -0.76
LIMK1-208ENST00000538333 MAP6D1Q9H9H5 199 aa10.3□□□□□ -0.76
LIMK1-208ENST00000538333 ZNF256Q9Y2P7 627 aaPredicted RBP10.3□□□□□ -0.76
LIMK1-208ENST00000538333 CCDC168Q8NDH2 2452 aa10.3□□□□□ -0.76
LIMK1-208ENST00000538333 UBE2V1Q13404 147 aa10.29□□□□□ -0.76
LIMK1-208ENST00000538333 ZNF876PQ49A33 203 aa10.29□□□□□ -0.76
LIMK1-208ENST00000538333 HIGD1BQ9P298 99 aa10.29□□□□□ -0.76
LIMK1-208ENST00000538333 CHTOPQ9Y3Y2 248 aaKnown RBP10.29□□□□□ -0.76
LIMK1-208ENST00000538333 NOTCH2Q04721 2471 aa10.29□□□□□ -0.76
LIMK1-208ENST00000538333 DYNLRB2Q8TF09 96 aa10.29□□□□□ -0.76
LIMK1-208ENST00000538333 RAX2Q96IS3 184 aa10.29□□□□□ -0.76
LIMK1-208ENST00000538333 CYSLTR1Q9Y271 337 aa10.29□□□□□ -0.76
LIMK1-208ENST00000538333 IGIPA6NJ69 53 aa10.28□□□□□ -0.76
LIMK1-208ENST00000538333 TSHBP01222 138 aa10.28□□□□□ -0.76
LIMK1-208ENST00000538333 FHL3Q13643 280 aa10.28□□□□□ -0.76
LIMK1-208ENST00000538333 ZNF56Q15929 161 aa10.28□□□□□ -0.76
LIMK1-208ENST00000538333 CD300EQ496F6 205 aaPredicted RBP10.28□□□□□ -0.76
LIMK1-208ENST00000538333 SVIPQ8NHG7 77 aa10.28□□□□□ -0.76
LIMK1-208ENST00000538333 KIR2DL4Q99706 377 aa10.28□□□□□ -0.76
LIMK1-208ENST00000538333 TRBV25-1A0A075B6N4 114 aa10.28□□□□□ -0.76
LIMK1-208ENST00000538333 PRSS29PA6NIE9 313 aa10.28□□□□□ -0.76
LIMK1-208ENST00000538333 LINC01549A6NIU2 74 aa10.28□□□□□ -0.76
LIMK1-208ENST00000538333 PTTG1IPP53801 180 aa10.28□□□□□ -0.76
LIMK1-208ENST00000538333 RIPPLY3P57055 190 aa10.28□□□□□ -0.76
LIMK1-208ENST00000538333 SPAG8Q99932 426 aaPredicted RBP10.28□□□□□ -0.76
LIMK1-208ENST00000538333 TP53TG1Q9Y2A0 90 aa10.28□□□□□ -0.76
LIMK1-208ENST00000538333 ANK3Q12955 4377 aaKnown RBP10.28□□□□□ -0.76
LIMK1-208ENST00000538333 MAPKAPK5-AS1Q8N8E1 139 aa10.26□□□□□ -0.77
LIMK1-208ENST00000538333 DEFB104AQ8WTQ1 72 aa10.26□□□□□ -0.77
LIMK1-208ENST00000538333 RPL39P62891 51 aaKnown RBP10.26□□□□□ -0.77
LIMK1-208ENST00000538333 TRPT1Q86TN4 253 aaKnown RBP10.26□□□□□ -0.77
LIMK1-208ENST00000538333 JMJD8Q96S16 334 aa10.26□□□□□ -0.77
LIMK1-208ENST00000538333 CHAC1Q9BUX1 264 aa10.26□□□□□ -0.77
LIMK1-208ENST00000538333 NACAE9PAV3 2078 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms