RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 B9D2Q9BPU9 175 aa11.19□□□□□ -0.62
SFSWAP-206ENST00000537582 SPATA25Q9BR10 227 aa11.19□□□□□ -0.62
SFSWAP-206ENST00000537582 CELA1Q9UNI1 258 aa11.19□□□□□ -0.62
SFSWAP-206ENST00000537582 DNAH9Q9NYC9 4486 aa11.18□□□□□ -0.62
SFSWAP-206ENST00000537582 IGHV4-4A0A075B6R2 117 aa11.18□□□□□ -0.62
SFSWAP-206ENST00000537582 DAZ2Q13117 558 aaKnown RBP11.18□□□□□ -0.62
SFSWAP-206ENST00000537582 RIGQ13278 110 aa11.18□□□□□ -0.62
SFSWAP-206ENST00000537582 PDZD11Q5EBL8 140 aa11.18□□□□□ -0.62
SFSWAP-206ENST00000537582 BORCS7Q96B45 105 aa11.18□□□□□ -0.62
SFSWAP-206ENST00000537582 GAGE12BA1L429 117 aa11.17□□□□□ -0.62
SFSWAP-206ENST00000537582 GAGE7O76087 117 aa11.17□□□□□ -0.62
SFSWAP-206ENST00000537582 GAGE12FP0CL80 117 aa11.17□□□□□ -0.62
SFSWAP-206ENST00000537582 GAGE12GP0CL81 117 aa11.17□□□□□ -0.62
SFSWAP-206ENST00000537582 GAGE12IP0CL82 117 aa11.17□□□□□ -0.62
SFSWAP-206ENST00000537582 EVI2AP22794 236 aa11.17□□□□□ -0.62
SFSWAP-206ENST00000537582 CACNG7P62955 275 aa11.17□□□□□ -0.62
SFSWAP-206ENST00000537582 HBBP68871 147 aa11.17□□□□□ -0.62
SFSWAP-206ENST00000537582 CTAG1AP78358 180 aa11.17□□□□□ -0.62
SFSWAP-206ENST00000537582 FAM222AQ5U5X8 452 aa11.17□□□□□ -0.62
SFSWAP-206ENST00000537582 SPXQ9BT56 116 aa11.17□□□□□ -0.62
SFSWAP-206ENST00000537582 SAMD10Q9BYL1 202 aa11.17□□□□□ -0.62
SFSWAP-206ENST00000537582 COL7A1Q02388 2944 aa11.16□□□□□ -0.62
SFSWAP-206ENST00000537582 A0A087WWL8 130 aa11.16□□□□□ -0.62
SFSWAP-206ENST00000537582 A0A0J9YWU9 116 aa11.16□□□□□ -0.62
SFSWAP-206ENST00000537582 MT-ND6P03923 174 aa11.16□□□□□ -0.62
SFSWAP-206ENST00000537582 WDR73Q6P4I2 378 aa11.16□□□□□ -0.62
SFSWAP-206ENST00000537582 TMEM136Q6ZRR5 245 aa11.16□□□□□ -0.62
SFSWAP-206ENST00000537582 ATP5L2Q7Z4Y8 100 aa11.16□□□□□ -0.62
SFSWAP-206ENST00000537582 C14orf178Q8N769 122 aaPredicted RBP11.16□□□□□ -0.62
SFSWAP-206ENST00000537582 SYT8Q8NBV8 401 aa11.16□□□□□ -0.62
SFSWAP-206ENST00000537582 DEFB130BP0DP73 79 aa11.15□□□□□ -0.62
SFSWAP-206ENST00000537582 DEFB130AP0DP74 79 aa11.15□□□□□ -0.62
SFSWAP-206ENST00000537582 RAB4BP61018 213 aa11.15□□□□□ -0.62
SFSWAP-206ENST00000537582 JOSD1Q15040 202 aaPredicted RBP11.15□□□□□ -0.62
SFSWAP-206ENST00000537582 POM121L12Q8N7R1 296 aa11.15□□□□□ -0.62
SFSWAP-206ENST00000537582 RASL10AQ92737 203 aa11.15□□□□□ -0.62
SFSWAP-206ENST00000537582 TMEM18Q96B42 140 aa11.15□□□□□ -0.62
SFSWAP-206ENST00000537582 GNB1LQ9BYB4 327 aa11.15□□□□□ -0.62
SFSWAP-206ENST00000537582 DKK2Q9UBU2 259 aa11.15□□□□□ -0.62
SFSWAP-206ENST00000537582 IGHV3-73A0A0B4J1V6 119 aa11.14□□□□□ -0.63
SFSWAP-206ENST00000537582 IGHV3-53P01767 116 aa11.14□□□□□ -0.63
SFSWAP-206ENST00000537582 MRPL18Q9H0U6 180 aaKnown RBP11.14□□□□□ -0.63
SFSWAP-206ENST00000537582 FBN3Q75N90 2809 aa11.14□□□□□ -0.63
SFSWAP-206ENST00000537582 LINC00587B1AMM8 73 aa11.13□□□□□ -0.63
SFSWAP-206ENST00000537582 CRYGDP07320 174 aa11.13□□□□□ -0.63
SFSWAP-206ENST00000537582 FAM74A4Q5TZK3 123 aa11.13□□□□□ -0.63
SFSWAP-206ENST00000537582 CFAP126Q5VTH2 177 aa11.13□□□□□ -0.63
SFSWAP-206ENST00000537582 AMN1Q8IY45 258 aa11.13□□□□□ -0.63
SFSWAP-206ENST00000537582 PTH2Q96A98 100 aa11.13□□□□□ -0.63
SFSWAP-206ENST00000537582 ZMAT4Q9H898 229 aa11.13□□□□□ -0.63
SFSWAP-206ENST00000537582 KIF25-AS1Q9Y6Z4 181 aa11.13□□□□□ -0.63
SFSWAP-206ENST00000537582 ESDP10768 282 aa11.12□□□□□ -0.63
SFSWAP-206ENST00000537582 SLAQ13239 276 aa11.12□□□□□ -0.63
SFSWAP-206ENST00000537582 LGALS9BQ3B8N2 356 aa11.12□□□□□ -0.63
SFSWAP-206ENST00000537582 RASL11AQ6T310 242 aa11.12□□□□□ -0.63
SFSWAP-206ENST00000537582 LINC00612Q8N6U2 182 aa11.12□□□□□ -0.63
SFSWAP-206ENST00000537582 AP1S3Q96PC3 154 aa11.12□□□□□ -0.63
SFSWAP-206ENST00000537582 TRGV2A0A075B6R0 118 aa11.11□□□□□ -0.63
SFSWAP-206ENST00000537582 A0A1B0GW15 77 aa11.11□□□□□ -0.63
SFSWAP-206ENST00000537582 LINC00315P59091 139 aa11.11□□□□□ -0.63
SFSWAP-206ENST00000537582 CDPF1Q6NVV7 123 aa11.11□□□□□ -0.63
SFSWAP-206ENST00000537582 GATD1Q8NB37 220 aa11.11□□□□□ -0.63
SFSWAP-206ENST00000537582 RNF185Q96GF1 192 aa11.11□□□□□ -0.63
SFSWAP-206ENST00000537582 ZNF479Q96JC4 524 aa11.11□□□□□ -0.63
SFSWAP-206ENST00000537582 TMEM191AQ9H0A3 160 aa11.11□□□□□ -0.63
SFSWAP-206ENST00000537582 C11orf68Q9H3H3 251 aaKnown RBP11.11□□□□□ -0.63
SFSWAP-206ENST00000537582 LYRM9A8MSI8 78 aa11.11□□□□□ -0.63
SFSWAP-206ENST00000537582 RS1O15537 224 aa11.11□□□□□ -0.63
SFSWAP-206ENST00000537582 GAS8-AS1O95177 125 aa11.11□□□□□ -0.63
SFSWAP-206ENST00000537582 HLA-DQA1P01909 254 aa11.11□□□□□ -0.63
SFSWAP-206ENST00000537582 MGPP08493 103 aa11.11□□□□□ -0.63
SFSWAP-206ENST00000537582 Q0VG73 95 aa11.11□□□□□ -0.63
SFSWAP-206ENST00000537582 UFSP1Q6NVU6 142 aa11.11□□□□□ -0.63
SFSWAP-206ENST00000537582 Q6ZSN1 163 aa11.11□□□□□ -0.63
SFSWAP-206ENST00000537582 TRAV26-2A0A0B4J265 109 aa11.1□□□□□ -0.63
SFSWAP-206ENST00000537582 SPART-AS1P0CW21 52 aa11.1□□□□□ -0.63
SFSWAP-206ENST00000537582 KIAA1644Q3SXP7 199 aa11.1□□□□□ -0.63
SFSWAP-206ENST00000537582 A8MWV9 139 aa11.09□□□□□ -0.63
SFSWAP-206ENST00000537582 SMKR1H3BMG3 65 aa11.09□□□□□ -0.63
SFSWAP-206ENST00000537582 RAB4AP20338 218 aa11.09□□□□□ -0.63
SFSWAP-206ENST00000537582 PIK3CD-AS1Q5SR53 167 aa11.09□□□□□ -0.63
SFSWAP-206ENST00000537582 FAM104BQ5XKR9 115 aa11.09□□□□□ -0.63
SFSWAP-206ENST00000537582 OR4C5Q8NGB2 326 aa11.09□□□□□ -0.63
SFSWAP-206ENST00000537582 DPH3P1Q9H4G8 78 aa11.09□□□□□ -0.63
SFSWAP-206ENST00000537582 NACAE9PAV3 2078 aa11.08□□□□□ -0.64
SFSWAP-206ENST00000537582 NCR2O95944 276 aa11.08□□□□□ -0.64
SFSWAP-206ENST00000537582 DAD1P61803 113 aa11.08□□□□□ -0.64
SFSWAP-206ENST00000537582 C12orf74Q32Q52 190 aa11.08□□□□□ -0.64
SFSWAP-206ENST00000537582 MRPL51Q4U2R6 128 aaKnown RBP11.08□□□□□ -0.64
SFSWAP-206ENST00000537582 SMIM15Q7Z3B0 74 aa11.08□□□□□ -0.64
SFSWAP-206ENST00000537582 TRAV4A0A0B4J268 109 aa11.07□□□□□ -0.64
SFSWAP-206ENST00000537582 APCSP02743 223 aa11.07□□□□□ -0.64
SFSWAP-206ENST00000537582 SMIM17P0DL12 118 aa11.07□□□□□ -0.64
SFSWAP-206ENST00000537582 GATA1P15976 413 aaPredicted RBP11.07□□□□□ -0.64
SFSWAP-206ENST00000537582 PKIAP61925 76 aa11.07□□□□□ -0.64
SFSWAP-206ENST00000537582 LINC00310P59036 64 aa11.07□□□□□ -0.64
SFSWAP-206ENST00000537582 NANOS2P60321 138 aaKnown RBP11.07□□□□□ -0.64
SFSWAP-206ENST00000537582 ZNF56Q15929 161 aa11.07□□□□□ -0.64
SFSWAP-206ENST00000537582 OR10J3Q5JRS4 329 aa11.07□□□□□ -0.64
SFSWAP-206ENST00000537582 NDUFAF3Q9BU61 184 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms