RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 LINC01620Q4KN68 170 aa5.57□□□□□ -1.52
USP28-203ENST00000537490 DNLZQ5SXM8 178 aa5.57□□□□□ -1.52
USP28-203ENST00000537490 Q6ZSA8 131 aa5.57□□□□□ -1.52
USP28-203ENST00000537490 Q86TA4 180 aa5.57□□□□□ -1.52
USP28-203ENST00000537490 NIT1Q86X76 327 aa5.57□□□□□ -1.52
USP28-203ENST00000537490 INO80EQ8NBZ0 244 aaPredicted RBP5.57□□□□□ -1.52
USP28-203ENST00000537490 A0A087WWL8 130 aa5.56□□□□□ -1.52
USP28-203ENST00000537490 FXYD6-FXYD2A0A087WZ82 144 aa5.56□□□□□ -1.52
USP28-203ENST00000537490 BORCS7-ASMTA0A0B4J1R7 106 aa5.56□□□□□ -1.52
USP28-203ENST00000537490 TOR2AQ5JU69 321 aa5.56□□□□□ -1.52
USP28-203ENST00000537490 FAM74A4Q5TZK3 123 aa5.56□□□□□ -1.52
USP28-203ENST00000537490 COX8CQ7Z4L0 72 aa5.56□□□□□ -1.52
USP28-203ENST00000537490 SYT8Q8NBV8 401 aa5.56□□□□□ -1.52
USP28-203ENST00000537490 OR11H4Q8NGC9 324 aa5.56□□□□□ -1.52
USP28-203ENST00000537490 HIST1H2BAQ96A08 127 aa5.56□□□□□ -1.52
USP28-203ENST00000537490 SFRP2Q96HF1 295 aa5.56□□□□□ -1.52
USP28-203ENST00000537490 ZFP30Q9Y2G7 519 aa5.56□□□□□ -1.52
USP28-203ENST00000537490 DNAH8Q96JB1 4490 aa5.56□□□□□ -1.52
USP28-203ENST00000537490 TMSB15BA0A087X1C1 80 aa5.55□□□□□ -1.52
USP28-203ENST00000537490 G3V3Q6 166 aa5.55□□□□□ -1.52
USP28-203ENST00000537490 RHODO00212 210 aa5.55□□□□□ -1.52
USP28-203ENST00000537490 PTTG1O95997 202 aa5.55□□□□□ -1.52
USP28-203ENST00000537490 PLA2G1BP04054 148 aaKnown RBP5.55□□□□□ -1.52
USP28-203ENST00000537490 AKR1C8PQ5T2L2 129 aa5.55□□□□□ -1.52
USP28-203ENST00000537490 FAM162BQ5T6X4 162 aa5.55□□□□□ -1.52
USP28-203ENST00000537490 NKX6-2Q9C056 277 aaPredicted RBP5.55□□□□□ -1.52
USP28-203ENST00000537490 CYTL1Q9NRR1 136 aa5.55□□□□□ -1.52
USP28-203ENST00000537490 KLK12Q9UKR0 248 aa5.55□□□□□ -1.52
USP28-203ENST00000537490 PHLDA3Q9Y5J5 127 aa5.55□□□□□ -1.52
USP28-203ENST00000537490 COX11Q9Y6N1 276 aa5.55□□□□□ -1.52
USP28-203ENST00000537490 VPS13BQ7Z7G8 4022 aa5.55□□□□□ -1.52
USP28-203ENST00000537490 IGKV2D-24A0A075B6R9 120 aa5.54□□□□□ -1.52
USP28-203ENST00000537490 MAP1LC3B2A6NCE7 125 aa5.54□□□□□ -1.52
USP28-203ENST00000537490 RBFOX3A6NFN3 312 aa5.54□□□□□ -1.52
USP28-203ENST00000537490 M0R381 172 aa5.54□□□□□ -1.52
USP28-203ENST00000537490 TPT1P13693 172 aaKnown RBP5.54□□□□□ -1.52
USP28-203ENST00000537490 ZNF674Q2M3X9 581 aa5.54□□□□□ -1.52
USP28-203ENST00000537490 SCXQ7RTU7 201 aa5.54□□□□□ -1.52
USP28-203ENST00000537490 Q8N976 141 aa5.54□□□□□ -1.52
USP28-203ENST00000537490 UBE2WQ96B02 151 aa5.54□□□□□ -1.52
USP28-203ENST00000537490 RMI2Q96E14 147 aa5.54□□□□□ -1.52
USP28-203ENST00000537490 MAP1LC3BQ9GZQ8 125 aa5.54□□□□□ -1.52
USP28-203ENST00000537490 URGCP-MRPS24S4R325 110 aa5.54□□□□□ -1.52
USP28-203ENST00000537490 MYCBP2O75592 4640 aa5.54□□□□□ -1.52
USP28-203ENST00000537490 TRBV6-1A0A0K0K1D8 114 aa5.53□□□□□ -1.52
USP28-203ENST00000537490 LTAP01374 205 aa5.53□□□□□ -1.52
USP28-203ENST00000537490 UBE2D3P61077 147 aa5.53□□□□□ -1.52
USP28-203ENST00000537490 UBE2G1P62253 170 aa5.53□□□□□ -1.52
USP28-203ENST00000537490 UBE2D2P62837 147 aa5.53□□□□□ -1.52
USP28-203ENST00000537490 CST9LP1Q5W188 147 aa5.53□□□□□ -1.52
USP28-203ENST00000537490 ZFP82Q8N141 532 aa5.53□□□□□ -1.52
USP28-203ENST00000537490 FMC1Q96HJ9 113 aa5.53□□□□□ -1.52
USP28-203ENST00000537490 BATF3Q9NR55 127 aa5.53□□□□□ -1.52
USP28-203ENST00000537490 SRRM2Q9UQ35 2752 aaKnown RBP5.53□□□□□ -1.52
USP28-203ENST00000537490 TRBV7-3A0A075B6L6 115 aa5.52□□□□□ -1.53
USP28-203ENST00000537490 A0A087WX48 190 aa5.52□□□□□ -1.53
USP28-203ENST00000537490 TRBV10-1A0A0K0K1A3 114 aa5.52□□□□□ -1.53
USP28-203ENST00000537490 KRTAP29-1A8MX34 341 aaPredicted RBP5.52□□□□□ -1.53
USP28-203ENST00000537490 TMEM262E9PQX1 116 aa5.52□□□□□ -1.53
USP28-203ENST00000537490 ARPC5O15511 151 aa5.52□□□□□ -1.53
USP28-203ENST00000537490 SEC11BP0C7V7 166 aa5.52□□□□□ -1.53
USP28-203ENST00000537490 AKR1C3P42330 323 aa5.52□□□□□ -1.53
USP28-203ENST00000537490 FHITP49789 147 aa5.52□□□□□ -1.53
USP28-203ENST00000537490 RPL36AP83881 106 aaKnown RBP5.52□□□□□ -1.53
USP28-203ENST00000537490 ATRAIDQ6UW56 229 aa5.52□□□□□ -1.53
USP28-203ENST00000537490 DEFB104AQ8WTQ1 72 aa5.52□□□□□ -1.53
USP28-203ENST00000537490 RPL36ALQ969Q0 106 aaKnown RBP5.52□□□□□ -1.53
USP28-203ENST00000537490 CHCHD7Q9BUK0 85 aa5.52□□□□□ -1.53
USP28-203ENST00000537490 TRBV6-8A0A0A6YYG3 113 aa5.51□□□□□ -1.53
USP28-203ENST00000537490 PAGE4O60829 102 aa5.51□□□□□ -1.53
USP28-203ENST00000537490 KRTAP10-4P60372 401 aaPredicted RBP5.51□□□□□ -1.53
USP28-203ENST00000537490 RPL19P84098 196 aaKnown RBP5.51□□□□□ -1.53
USP28-203ENST00000537490 ELOBQ15370 118 aa5.51□□□□□ -1.53
USP28-203ENST00000537490 ENHOQ6UWT2 76 aa5.51□□□□□ -1.53
USP28-203ENST00000537490 NEXN-AS1Q8NBZ9 246 aa5.51□□□□□ -1.53
USP28-203ENST00000537490 OR10G8Q8NGN5 311 aa5.51□□□□□ -1.53
USP28-203ENST00000537490 OR10AG1Q8NH19 301 aa5.51□□□□□ -1.53
USP28-203ENST00000537490 STOML3Q8TAV4 291 aa5.51□□□□□ -1.53
USP28-203ENST00000537490 CIRBP-AS1Q8TBR5 109 aa5.51□□□□□ -1.53
USP28-203ENST00000537490 CHAC1Q9BUX1 264 aa5.51□□□□□ -1.53
USP28-203ENST00000537490 MUC21A0A0G2JKD1 596 aa5.5□□□□□ -1.53
USP28-203ENST00000537490 MUC21A0A140T8X8 626 aa5.5□□□□□ -1.53
USP28-203ENST00000537490 SMLR1H3BR10 107 aa5.5□□□□□ -1.53
USP28-203ENST00000537490 RAB4BP61018 213 aa5.5□□□□□ -1.53
USP28-203ENST00000537490 Q0VG73 95 aa5.5□□□□□ -1.53
USP28-203ENST00000537490 PRR27Q6MZM9 219 aa5.5□□□□□ -1.53
USP28-203ENST00000537490 KCNIP4Q6PIL6 250 aa5.5□□□□□ -1.53
USP28-203ENST00000537490 MBD3L1Q8WWY6 194 aa5.5□□□□□ -1.53
USP28-203ENST00000537490 TCEAL7Q9BRU2 100 aa5.5□□□□□ -1.53
USP28-203ENST00000537490 MLST8Q9BVC4 326 aa5.5□□□□□ -1.53
USP28-203ENST00000537490 A0A1B0GV50 99 aa5.49□□□□□ -1.53
USP28-203ENST00000537490 SCO2A0A1W2PP80 73 aa5.49□□□□□ -1.53
USP28-203ENST00000537490 SNAI2O43623 268 aa5.49□□□□□ -1.53
USP28-203ENST00000537490 ZNF56Q15929 161 aa5.49□□□□□ -1.53
USP28-203ENST00000537490 MPV17L2Q567V2 206 aa5.49□□□□□ -1.53
USP28-203ENST00000537490 NTM-AS1Q6ZSK4 140 aa5.49□□□□□ -1.53
USP28-203ENST00000537490 BAGE2Q86Y30 109 aa5.49□□□□□ -1.53
USP28-203ENST00000537490 C15orf54Q8N8G6 183 aa5.49□□□□□ -1.53
USP28-203ENST00000537490 SFT2D1Q8WV19 159 aa5.49□□□□□ -1.53
USP28-203ENST00000537490 SSBP4Q9BWG4 385 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms