RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-213	ENST00000536843	YAE1D1	Q9NRH1	226 aa		11.81	□□□□□ -0.52
CHFR-213	ENST00000536843	PKD1L2	Q7Z442	2459 aa		11.81	□□□□□ -0.52
CHFR-213	ENST00000536843	ITPR1	Q14643	2758 aa		11.81	□□□□□ -0.52
CHFR-213	ENST00000536843	PMVK	Q15126	192 aa		11.8	□□□□□ -0.52
CHFR-213	ENST00000536843	ODF3B	A8MYP8	253 aa		11.8	□□□□□ -0.52
CHFR-213	ENST00000536843		M0R1W7	72 aa		11.8	□□□□□ -0.52
CHFR-213	ENST00000536843	MRPL53	Q96EL3	112 aa	Known RBP	11.8	□□□□□ -0.52
CHFR-213	ENST00000536843	IGIP	A6NJ69	53 aa		11.79	□□□□□ -0.52
CHFR-213	ENST00000536843		J3QQQ9	107 aa		11.79	□□□□□ -0.52
CHFR-213	ENST00000536843	IGHV3-23	P01764	117 aa		11.79	□□□□□ -0.52
CHFR-213	ENST00000536843	ELANE	P08246	267 aa		11.79	□□□□□ -0.52
CHFR-213	ENST00000536843	HES1	Q14469	280 aa		11.79	□□□□□ -0.52
CHFR-213	ENST00000536843	LINC01587	Q99440	93 aa		11.79	□□□□□ -0.52
CHFR-213	ENST00000536843	FAM240A	A0A1B0GVK7	77 aa		11.79	□□□□□ -0.52
CHFR-213	ENST00000536843	PPP1R17	O96001	155 aa		11.79	□□□□□ -0.52
CHFR-213	ENST00000536843	BUB3	O43684	328 aa		11.78	□□□□□ -0.52
CHFR-213	ENST00000536843	C9orf47	Q6ZRZ4	202 aa		11.78	□□□□□ -0.52
CHFR-213	ENST00000536843	COL6A6	A6NMZ7	2263 aa		11.78	□□□□□ -0.52
CHFR-213	ENST00000536843	TRBV7-7	A0A0K0K1E9	115 aa		11.78	□□□□□ -0.52
CHFR-213	ENST00000536843		A0A1W2PPR1	153 aa		11.78	□□□□□ -0.52
CHFR-213	ENST00000536843	EMP1	P54849	157 aa		11.78	□□□□□ -0.52
CHFR-213	ENST00000536843	HRNR	Q86YZ3	2850 aa	Predicted RBP	11.77	□□□□□ -0.52
CHFR-213	ENST00000536843	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.77	□□□□□ -0.52
CHFR-213	ENST00000536843	TRBV30	A0A0K0K1B3	111 aa		11.77	□□□□□ -0.52
CHFR-213	ENST00000536843	TMEM141	Q96I45	108 aa		11.77	□□□□□ -0.52
CHFR-213	ENST00000536843	PPDPF	Q9H3Y8	114 aa		11.77	□□□□□ -0.52
CHFR-213	ENST00000536843	LGALS3	P17931	250 aa	Known RBP	11.77	□□□□□ -0.53
CHFR-213	ENST00000536843	ZFP36	P26651	326 aa	Known RBP	11.77	□□□□□ -0.53
CHFR-213	ENST00000536843	TMEM170B	Q5T4T1	132 aa		11.77	□□□□□ -0.53
CHFR-213	ENST00000536843	VMO1	Q7Z5L0	202 aa		11.77	□□□□□ -0.53
CHFR-213	ENST00000536843	C14orf178	Q8N769	122 aa	Predicted RBP	11.77	□□□□□ -0.53
CHFR-213	ENST00000536843	TP53TG1	Q9Y2A0	90 aa		11.77	□□□□□ -0.53
CHFR-213	ENST00000536843	ACACB	O00763	2458 aa		11.76	□□□□□ -0.53
CHFR-213	ENST00000536843	GPHB5	Q86YW7	130 aa		11.76	□□□□□ -0.53
CHFR-213	ENST00000536843	IGHV3OR16-8	A0A075B7F1	116 aa		11.76	□□□□□ -0.53
CHFR-213	ENST00000536843		H7C2G1	150 aa		11.76	□□□□□ -0.53
CHFR-213	ENST00000536843	IGHV4-39	P01824	125 aa		11.76	□□□□□ -0.53
CHFR-213	ENST00000536843	ZNRF2	Q8NHG8	242 aa		11.76	□□□□□ -0.53
CHFR-213	ENST00000536843	TIMM17A	Q99595	171 aa		11.76	□□□□□ -0.53
CHFR-213	ENST00000536843	ZFAND3	Q9H8U3	227 aa		11.76	□□□□□ -0.53
CHFR-213	ENST00000536843	ZNF876P	Q49A33	203 aa		11.75	□□□□□ -0.53
CHFR-213	ENST00000536843	CHCHD5	Q9BSY4	110 aa		11.75	□□□□□ -0.53
CHFR-213	ENST00000536843		H3BT86	120 aa		11.75	□□□□□ -0.53
CHFR-213	ENST00000536843	NDP	Q00604	133 aa		11.75	□□□□□ -0.53
CHFR-213	ENST00000536843		Q1RN00	199 aa		11.75	□□□□□ -0.53
CHFR-213	ENST00000536843	DEFB121	Q5J5C9	76 aa		11.75	□□□□□ -0.53
CHFR-213	ENST00000536843	MUSTN1	Q8IVN3	82 aa		11.75	□□□□□ -0.53
CHFR-213	ENST00000536843	POM121L12	Q8N7R1	296 aa		11.75	□□□□□ -0.53
CHFR-213	ENST00000536843	PRR9	Q5T870	116 aa		11.74	□□□□□ -0.53
CHFR-213	ENST00000536843	C2orf82	Q6UX34	121 aa		11.74	□□□□□ -0.53
CHFR-213	ENST00000536843	LENEP	Q9Y5L5	61 aa		11.74	□□□□□ -0.53
CHFR-213	ENST00000536843		M0R2P5	195 aa		11.74	□□□□□ -0.53
CHFR-213	ENST00000536843	LEPROT	O15243	131 aa		11.74	□□□□□ -0.53
CHFR-213	ENST00000536843	TRIAP1	O43715	76 aa		11.74	□□□□□ -0.53
CHFR-213	ENST00000536843	MGP	P08493	103 aa		11.74	□□□□□ -0.53
CHFR-213	ENST00000536843	NRGN	Q92686	78 aa		11.73	□□□□□ -0.53
CHFR-213	ENST00000536843	IGHV3-35	A0A0C4DH35	117 aa		11.72	□□□□□ -0.53
CHFR-213	ENST00000536843	MED14OS	P0DP75	135 aa		11.72	□□□□□ -0.53
CHFR-213	ENST00000536843	ID1	P41134	155 aa		11.72	□□□□□ -0.53
CHFR-213	ENST00000536843	ZNF56	Q15929	161 aa		11.72	□□□□□ -0.53
CHFR-213	ENST00000536843		H7C423	109 aa		11.72	□□□□□ -0.53
CHFR-213	ENST00000536843	EBI3	Q14213	229 aa		11.72	□□□□□ -0.53
CHFR-213	ENST00000536843		Q8N6K4	173 aa		11.72	□□□□□ -0.53
CHFR-213	ENST00000536843	DNAJC30	Q96LL9	226 aa		11.72	□□□□□ -0.53
CHFR-213	ENST00000536843	UBTD1	Q9HAC8	227 aa		11.72	□□□□□ -0.53
CHFR-213	ENST00000536843	SPTBN1	Q01082	2364 aa	Known RBP	11.72	□□□□□ -0.53
CHFR-213	ENST00000536843		A0A0J9YX75	114 aa		11.71	□□□□□ -0.53
CHFR-213	ENST00000536843	PHLDA3	Q9Y5J5	127 aa		11.71	□□□□□ -0.53
CHFR-213	ENST00000536843	IGHV4OR15-8	A0A075B7B6	117 aa		11.71	□□□□□ -0.54
CHFR-213	ENST00000536843		A0A087WW49	117 aa		11.71	□□□□□ -0.54
CHFR-213	ENST00000536843	CLPSL1	A2RUU4	121 aa		11.71	□□□□□ -0.54
CHFR-213	ENST00000536843	ASH1L	Q9NR48	2969 aa	Known RBP	11.71	□□□□□ -0.54
CHFR-213	ENST00000536843	TMEM223	A0PJW6	202 aa		11.7	□□□□□ -0.54
CHFR-213	ENST00000536843	S100A4	P26447	101 aa	Known RBP	11.7	□□□□□ -0.54
CHFR-213	ENST00000536843	TMEM101	Q96IK0	257 aa		11.7	□□□□□ -0.54
CHFR-213	ENST00000536843	IMUP	Q9GZP8	106 aa		11.7	□□□□□ -0.54
CHFR-213	ENST00000536843	SIRPD	Q9H106	197 aa		11.7	□□□□□ -0.54
CHFR-213	ENST00000536843	CSMD1	Q96PZ7	3565 aa		11.7	□□□□□ -0.54
CHFR-213	ENST00000536843	MED13L	Q71F56	2210 aa		11.7	□□□□□ -0.54
CHFR-213	ENST00000536843	SDHAF1	A6NFY7	115 aa		11.7	□□□□□ -0.54
CHFR-213	ENST00000536843	SPRY2	O43597	315 aa		11.7	□□□□□ -0.54
CHFR-213	ENST00000536843	POLR2K	P53803	58 aa	Known RBP	11.7	□□□□□ -0.54
CHFR-213	ENST00000536843	RPL39	P62891	51 aa	Known RBP	11.7	□□□□□ -0.54
CHFR-213	ENST00000536843	MINOS1	Q5TGZ0	78 aa		11.7	□□□□□ -0.54
CHFR-213	ENST00000536843	SPANXD	Q9BXN6	97 aa		11.7	□□□□□ -0.54
CHFR-213	ENST00000536843	MINOS1-NBL1	R4GNA1	71 aa		11.7	□□□□□ -0.54
CHFR-213	ENST00000536843	SVEP1	Q4LDE5	3571 aa		11.7	□□□□□ -0.54
CHFR-213	ENST00000536843	IGHV3-66	A0A0C4DH42	116 aa		11.69	□□□□□ -0.54
CHFR-213	ENST00000536843	OOSP1	A8MZH6	123 aa		11.69	□□□□□ -0.54
CHFR-213	ENST00000536843	BEX4	Q9NWD9	120 aa	Predicted RBP	11.69	□□□□□ -0.54
CHFR-213	ENST00000536843	TRAV21	A0A0B4J279	112 aa		11.69	□□□□□ -0.54
CHFR-213	ENST00000536843	COL12A1	Q99715	3063 aa		11.69	□□□□□ -0.54
CHFR-213	ENST00000536843	C3orf56	Q8N813	242 aa		11.68	□□□□□ -0.54
CHFR-213	ENST00000536843	CSDC2	Q9Y534	153 aa	Known RBP	11.68	□□□□□ -0.54
CHFR-213	ENST00000536843	HIVEP3	Q5T1R4	2406 aa		11.68	□□□□□ -0.54
CHFR-213	ENST00000536843	WNK2	Q9Y3S1	2297 aa		11.68	□□□□□ -0.54
CHFR-213	ENST00000536843	GNLY	P22749	145 aa		11.68	□□□□□ -0.54
CHFR-213	ENST00000536843	ZFAND2A	Q8N6M9	145 aa		11.68	□□□□□ -0.54
CHFR-213	ENST00000536843	ICOS	Q9Y6W8	199 aa		11.68	□□□□□ -0.54
CHFR-213	ENST00000536843	IGHV7-81	A0A0B4J1V7	117 aa		11.67	□□□□□ -0.54

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