RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 TRGV3P03979 118 aa10.67□□□□□ -0.7
LIG1-203ENST00000536218 Q8N9W7 124 aa10.67□□□□□ -0.7
LIG1-203ENST00000536218 C5orf47Q569G3 176 aa10.67□□□□□ -0.7
LIG1-203ENST00000536218 C10orf126Q8N4M7 172 aa10.67□□□□□ -0.7
LIG1-203ENST00000536218 RNF125Q96EQ8 232 aa10.67□□□□□ -0.7
LIG1-203ENST00000536218 TMEM126AQ9H061 195 aa10.67□□□□□ -0.7
LIG1-203ENST00000536218 IGLC6P0CF74 106 aa10.66□□□□□ -0.7
LIG1-203ENST00000536218 MFAP4P55083 255 aa10.66□□□□□ -0.7
LIG1-203ENST00000536218 Q8N6K4 173 aa10.66□□□□□ -0.7
LIG1-203ENST00000536218 ZNF491Q8N8L2 437 aa10.66□□□□□ -0.7
LIG1-203ENST00000536218 SHANK2-AS3Q9BTD1 123 aa10.66□□□□□ -0.7
LIG1-203ENST00000536218 LINC00527Q9UJ94 153 aa10.66□□□□□ -0.7
LIG1-203ENST00000536218 ABCA2Q9BZC7 2435 aa10.66□□□□□ -0.7
LIG1-203ENST00000536218 Q6Q795 121 aa10.66□□□□□ -0.7
LIG1-203ENST00000536218 PRO1854Q9UHT4 67 aa10.66□□□□□ -0.7
LIG1-203ENST00000536218 IGLV11-55A0A075B6I3 123 aa10.65□□□□□ -0.7
LIG1-203ENST00000536218 IGLV2-18A0A075B6J9 118 aa10.65□□□□□ -0.7
LIG1-203ENST00000536218 LINC01546A6NGU7 62 aa10.65□□□□□ -0.7
LIG1-203ENST00000536218 OOSP1A8MZH6 123 aa10.65□□□□□ -0.7
LIG1-203ENST00000536218 NPFFO15130 113 aa10.65□□□□□ -0.7
LIG1-203ENST00000536218 G3V318 75 aa10.65□□□□□ -0.7
LIG1-203ENST00000536218 Q6ZS46 218 aa10.64□□□□□ -0.71
LIG1-203ENST00000536218 DEFB104AQ8WTQ1 72 aa10.64□□□□□ -0.71
LIG1-203ENST00000536218 LINC01587Q99440 93 aa10.64□□□□□ -0.71
LIG1-203ENST00000536218 MDFICQ9P1T7 246 aa10.64□□□□□ -0.71
LIG1-203ENST00000536218 ATP6V0E1O15342 81 aa10.64□□□□□ -0.71
LIG1-203ENST00000536218 PIMREGQ9BSJ6 248 aa10.64□□□□□ -0.71
LIG1-203ENST00000536218 EBI3Q14213 229 aa10.63□□□□□ -0.71
LIG1-203ENST00000536218 LYPD1Q8N2G4 141 aa10.63□□□□□ -0.71
LIG1-203ENST00000536218 SPANXA1Q9NS26 97 aa10.63□□□□□ -0.71
LIG1-203ENST00000536218 IGHV4-30-2A0A087WSY4 118 aa10.63□□□□□ -0.71
LIG1-203ENST00000536218 PTPN13Q12923 2485 aa10.63□□□□□ -0.71
LIG1-203ENST00000536218 MRPS12O15235 138 aaKnown RBP10.63□□□□□ -0.71
LIG1-203ENST00000536218 HLA-DMBP28068 263 aa10.63□□□□□ -0.71
LIG1-203ENST00000536218 C9orf153Q5TBE3 101 aa10.63□□□□□ -0.71
LIG1-203ENST00000536218 F8W735 103 aaPredicted RBP10.62□□□□□ -0.71
LIG1-203ENST00000536218 H3BRN7 92 aa10.62□□□□□ -0.71
LIG1-203ENST00000536218 LY6EQ16553 131 aa10.62□□□□□ -0.71
LIG1-203ENST00000536218 C15orf32Q32M92 178 aa10.62□□□□□ -0.71
LIG1-203ENST00000536218 IGHV3OR16-13A0A075B7E8 117 aa10.61□□□□□ -0.71
LIG1-203ENST00000536218 IGHV3-74A0A0B4J1X5 117 aa10.61□□□□□ -0.71
LIG1-203ENST00000536218 A0A0J9YY99 117 aa10.61□□□□□ -0.71
LIG1-203ENST00000536218 KLK5Q9Y337 293 aaPredicted RBP10.61□□□□□ -0.71
LIG1-203ENST00000536218 ABCA12Q86UK0 2595 aa10.61□□□□□ -0.71
LIG1-203ENST00000536218 TRAV12-1A0A0B4J245 112 aa10.61□□□□□ -0.71
LIG1-203ENST00000536218 H3BMM0 161 aa10.61□□□□□ -0.71
LIG1-203ENST00000536218 ERCC8Q13216 396 aa10.61□□□□□ -0.71
LIG1-203ENST00000536218 UBE2WQ96B02 151 aa10.61□□□□□ -0.71
LIG1-203ENST00000536218 BBC3Q96PG8 261 aaPredicted RBP10.61□□□□□ -0.71
LIG1-203ENST00000536218 SPXQ9BT56 116 aa10.61□□□□□ -0.71
LIG1-203ENST00000536218 ELANEP08246 267 aa10.61□□□□□ -0.71
LIG1-203ENST00000536218 HERVK_113P61574 105 aa10.61□□□□□ -0.71
LIG1-203ENST00000536218 DNAJC30Q96LL9 226 aa10.61□□□□□ -0.71
LIG1-203ENST00000536218 IGHV3-66A0A0C4DH42 116 aa10.6□□□□□ -0.71
LIG1-203ENST00000536218 FAM236AA0A1B0GUQ0 79 aa10.6□□□□□ -0.71
LIG1-203ENST00000536218 FAM236BA0A1B0GV22 79 aa10.6□□□□□ -0.71
LIG1-203ENST00000536218 SMIM9A6NGZ8 99 aa10.6□□□□□ -0.71
LIG1-203ENST00000536218 CTSGP08311 255 aa10.6□□□□□ -0.71
LIG1-203ENST00000536218 IGHV4-38-2P0DP08 117 aa10.6□□□□□ -0.71
LIG1-203ENST00000536218 LINC01620Q4KN68 170 aa10.6□□□□□ -0.71
LIG1-203ENST00000536218 NRACQ8N912 160 aa10.6□□□□□ -0.71
LIG1-203ENST00000536218 C10orf105Q8TEF2 133 aa10.6□□□□□ -0.71
LIG1-203ENST00000536218 DUX3Q96PT4 197 aa10.6□□□□□ -0.71
LIG1-203ENST00000536218 DUSP14O95147 198 aaKnown RBP10.6□□□□□ -0.71
LIG1-203ENST00000536218 IL17RELQ6ZVW7 336 aa10.6□□□□□ -0.71
LIG1-203ENST00000536218 IGHV3-49A0A0A0MS15 119 aa10.59□□□□□ -0.71
LIG1-203ENST00000536218 A4D1N5 150 aa10.59□□□□□ -0.71
LIG1-203ENST00000536218 NEXN-AS1Q8NBZ9 246 aa10.59□□□□□ -0.71
LIG1-203ENST00000536218 IGHV3-30P01768 117 aa10.59□□□□□ -0.71
LIG1-203ENST00000536218 IGHV3-30-5P0DP03 117 aa10.59□□□□□ -0.71
LIG1-203ENST00000536218 SPANXN1Q5VSR9 72 aa10.59□□□□□ -0.71
LIG1-203ENST00000536218 CLEC19AQ6UXS0 136 aa10.59□□□□□ -0.71
LIG1-203ENST00000536218 ZNF575Q86XF7 245 aa10.59□□□□□ -0.71
LIG1-203ENST00000536218 BAALCQ8WXS3 180 aa10.59□□□□□ -0.71
LIG1-203ENST00000536218 C2orf82Q6UX34 121 aa10.59□□□□□ -0.71
LIG1-203ENST00000536218 MAPK1IP1LQ8NDC0 245 aa10.59□□□□□ -0.71
LIG1-203ENST00000536218 IGHV1-69DA0A0B4J2H0 117 aa10.58□□□□□ -0.72
LIG1-203ENST00000536218 IGHV1-69P01742 117 aa10.58□□□□□ -0.72
LIG1-203ENST00000536218 COX6B1P14854 86 aa10.58□□□□□ -0.72
LIG1-203ENST00000536218 ATXN8Q156A1 80 aa10.58□□□□□ -0.72
LIG1-203ENST00000536218 FAM19A5Q7Z5A7 132 aaPredicted RBP10.58□□□□□ -0.72
LIG1-203ENST00000536218 CUBNO60494 3623 aa10.58□□□□□ -0.72
LIG1-203ENST00000536218 TRGV11A0A075B6L2 103 aa10.58□□□□□ -0.72
LIG1-203ENST00000536218 SPRY2O43597 315 aa10.58□□□□□ -0.72
LIG1-203ENST00000536218 PMVKQ15126 192 aa10.58□□□□□ -0.72
LIG1-203ENST00000536218 TMEM170BQ5T4T1 132 aa10.58□□□□□ -0.72
LIG1-203ENST00000536218 SMIM2Q9BVW6 85 aa10.58□□□□□ -0.72
LIG1-203ENST00000536218 LGALS9O00182 355 aa10.57□□□□□ -0.72
LIG1-203ENST00000536218 C2orf66Q6UXQ4 117 aa10.57□□□□□ -0.72
LIG1-203ENST00000536218 EDA2RQ9HAV5 297 aa10.57□□□□□ -0.72
LIG1-203ENST00000536218 ANKRD17O75179 2603 aaKnown RBP10.57□□□□□ -0.72
LIG1-203ENST00000536218 DOPEY2Q9Y3R5 2298 aa10.57□□□□□ -0.72
LIG1-203ENST00000536218 HERVK_113P63121 156 aa10.57□□□□□ -0.72
LIG1-203ENST00000536218 FAM110DQ8TAY7 271 aaPredicted RBP10.57□□□□□ -0.72
LIG1-203ENST00000536218 TLN2Q9Y4G6 2542 aa10.56□□□□□ -0.72
LIG1-203ENST00000536218 C11orf86A6NJI1 115 aa10.56□□□□□ -0.72
LIG1-203ENST00000536218 IGHV3-33P01772 117 aa10.56□□□□□ -0.72
LIG1-203ENST00000536218 C5orf56Q8N8D9 126 aa10.56□□□□□ -0.72
LIG1-203ENST00000536218 CNFNQ9BYD5 112 aa10.56□□□□□ -0.72
LIG1-203ENST00000536218 ZANQ9Y493 2812 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms