RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 LINC00477Q96M19 166 aa13.61□□□□□ -0.23
RAB40C-203ENST00000535977 IGHV3OR16-13A0A075B7E8 117 aa13.61□□□□□ -0.23
RAB40C-203ENST00000535977 IGHV3-74A0A0B4J1X5 117 aa13.61□□□□□ -0.23
RAB40C-203ENST00000535977 ZNF843Q8N446 348 aa13.61□□□□□ -0.23
RAB40C-203ENST00000535977 HELZ2Q9BYK8 2649 aaKnown RBP13.61□□□□□ -0.23
RAB40C-203ENST00000535977 IGHV4-4A0A075B6R2 117 aa13.6□□□□□ -0.23
RAB40C-203ENST00000535977 LYRM7Q5U5X0 104 aa13.6□□□□□ -0.23
RAB40C-203ENST00000535977 FAM159AQ6UWV7 190 aa13.6□□□□□ -0.23
RAB40C-203ENST00000535977 IGHV3OR16-10A0A075B7F0 116 aa13.59□□□□□ -0.23
RAB40C-203ENST00000535977 IGHV3-49A0A0A0MS15 119 aa13.59□□□□□ -0.23
RAB40C-203ENST00000535977 A6NDX4 124 aa13.59□□□□□ -0.23
RAB40C-203ENST00000535977 OVOL1O14753 267 aa13.59□□□□□ -0.23
RAB40C-203ENST00000535977 BRD3OSQ6XYD6 125 aa13.59□□□□□ -0.23
RAB40C-203ENST00000535977 LRRK2Q5S007 2527 aa13.59□□□□□ -0.23
RAB40C-203ENST00000535977 USP9XQ93008 2570 aaPredicted RBP13.58□□□□□ -0.24
RAB40C-203ENST00000535977 SRSF9Q13242 221 aaKnown RBP eCLIP13.58□□□□□ -0.24
RAB40C-203ENST00000535977 LAGE3Q14657 143 aa13.58□□□□□ -0.24
RAB40C-203ENST00000535977 PLEKHB2Q96CS7 222 aa13.58□□□□□ -0.24
RAB40C-203ENST00000535977 F8VRH5 84 aa13.58□□□□□ -0.24
RAB40C-203ENST00000535977 UTP20O75691 2785 aaKnown RBP13.58□□□□□ -0.24
RAB40C-203ENST00000535977 H7C1H1 209 aa13.57□□□□□ -0.24
RAB40C-203ENST00000535977 CD7P09564 240 aa13.57□□□□□ -0.24
RAB40C-203ENST00000535977 ATP5J2P56134 94 aa13.57□□□□□ -0.24
RAB40C-203ENST00000535977 OR10J6PQ8NGY7 276 aa13.57□□□□□ -0.24
RAB40C-203ENST00000535977 C11orf21Q9P2W6 132 aa13.57□□□□□ -0.24
RAB40C-203ENST00000535977 MSMBP08118 114 aa13.56□□□□□ -0.24
RAB40C-203ENST00000535977 SCGB1D4Q6XE38 83 aa13.56□□□□□ -0.24
RAB40C-203ENST00000535977 NDUFA11Q86Y39 141 aa13.56□□□□□ -0.24
RAB40C-203ENST00000535977 LINC00527Q9UJ94 153 aa13.56□□□□□ -0.24
RAB40C-203ENST00000535977 IGHV7-4-1A0A0J9YVY3 117 aa13.56□□□□□ -0.24
RAB40C-203ENST00000535977 ZNF815PA8K554 130 aa13.56□□□□□ -0.24
RAB40C-203ENST00000535977 ASIPP42127 132 aa13.56□□□□□ -0.24
RAB40C-203ENST00000535977 Q6ZQT7 251 aa13.56□□□□□ -0.24
RAB40C-203ENST00000535977 DSCR9P59020 149 aa13.55□□□□□ -0.24
RAB40C-203ENST00000535977 PRADC1Q9BSG0 188 aa13.55□□□□□ -0.24
RAB40C-203ENST00000535977 H3BUX3 64 aa13.55□□□□□ -0.24
RAB40C-203ENST00000535977 IGHV4-38-2P0DP08 117 aa13.55□□□□□ -0.24
RAB40C-203ENST00000535977 ID1P41134 155 aa13.55□□□□□ -0.24
RAB40C-203ENST00000535977 ZNF580Q9UK33 172 aa13.55□□□□□ -0.24
RAB40C-203ENST00000535977 SPANXN1Q5VSR9 72 aa13.54□□□□□ -0.24
RAB40C-203ENST00000535977 TRAV12-1A0A0B4J245 112 aa13.54□□□□□ -0.24
RAB40C-203ENST00000535977 TRAV26-2A0A0B4J265 109 aa13.54□□□□□ -0.24
RAB40C-203ENST00000535977 TRAV21A0A0B4J279 112 aa13.54□□□□□ -0.24
RAB40C-203ENST00000535977 SLC25A20O43772 301 aa13.54□□□□□ -0.24
RAB40C-203ENST00000535977 SCGB1C2P0DMR2 95 aa13.54□□□□□ -0.24
RAB40C-203ENST00000535977 LY6EQ16553 131 aa13.54□□□□□ -0.24
RAB40C-203ENST00000535977 TENM4Q6N022 2769 aa13.53□□□□□ -0.24
RAB40C-203ENST00000535977 B4DSR2 109 aa13.53□□□□□ -0.24
RAB40C-203ENST00000535977 SOCS3O14543 225 aa13.53□□□□□ -0.24
RAB40C-203ENST00000535977 UNQ9165/PRO28630Q6UXU0 137 aa13.53□□□□□ -0.24
RAB40C-203ENST00000535977 YAE1D1Q9NRH1 226 aa13.53□□□□□ -0.24
RAB40C-203ENST00000535977 VPREB3Q9UKI3 123 aa13.53□□□□□ -0.24
RAB40C-203ENST00000535977 GCN1Q92616 2671 aaKnown RBP13.53□□□□□ -0.24
RAB40C-203ENST00000535977 MEIG1Q5JSS6 88 aa13.53□□□□□ -0.24
RAB40C-203ENST00000535977 IGHV4-30-2A0A087WSY4 118 aa13.52□□□□□ -0.24
RAB40C-203ENST00000535977 IGLV1-40P01703 118 aa13.52□□□□□ -0.24
RAB40C-203ENST00000535977 PF4V1P10720 104 aa13.52□□□□□ -0.24
RAB40C-203ENST00000535977 SLC25A16P16260 332 aa13.52□□□□□ -0.24
RAB40C-203ENST00000535977 Q6Q795 121 aa13.52□□□□□ -0.24
RAB40C-203ENST00000535977 NRACQ8N912 160 aa13.52□□□□□ -0.24
RAB40C-203ENST00000535977 C20orf173Q96LM9 149 aa13.52□□□□□ -0.24
RAB40C-203ENST00000535977 MED14OSP0DP75 135 aa13.52□□□□□ -0.25
RAB40C-203ENST00000535977 KLK15Q9H2R5 256 aa13.52□□□□□ -0.25
RAB40C-203ENST00000535977 PPDPFQ9H3Y8 114 aa13.52□□□□□ -0.25
RAB40C-203ENST00000535977 C9JAW5 83 aa13.51□□□□□ -0.25
RAB40C-203ENST00000535977 TRBV12-3P01733 135 aa13.51□□□□□ -0.25
RAB40C-203ENST00000535977 GPHB5Q86YW7 130 aa13.51□□□□□ -0.25
RAB40C-203ENST00000535977 KLHL30-AS1Q8NEE0 82 aa13.51□□□□□ -0.25
RAB40C-203ENST00000535977 K7EMT4 169 aa13.5□□□□□ -0.25
RAB40C-203ENST00000535977 CFC1BP0CG36 223 aa13.5□□□□□ -0.25
RAB40C-203ENST00000535977 CFC1P0CG37 223 aa13.5□□□□□ -0.25
RAB40C-203ENST00000535977 ZFAND2AQ8N6M9 145 aa13.5□□□□□ -0.25
RAB40C-203ENST00000535977 COX6B1P14854 86 aa13.49□□□□□ -0.25
RAB40C-203ENST00000535977 RASL10AQ92737 203 aa13.49□□□□□ -0.25
RAB40C-203ENST00000535977 TRPT1Q86TN4 253 aaKnown RBP13.49□□□□□ -0.25
RAB40C-203ENST00000535977 APRG1Q8IVJ8 170 aa13.49□□□□□ -0.25
RAB40C-203ENST00000535977 FAM19A4Q96LR4 140 aa13.49□□□□□ -0.25
RAB40C-203ENST00000535977 ODF3Q96PU9 254 aa13.49□□□□□ -0.25
RAB40C-203ENST00000535977 DAZ1Q9NQZ3 744 aaKnown RBP13.49□□□□□ -0.25
RAB40C-203ENST00000535977 CENPEQ02224 2701 aa13.49□□□□□ -0.25
RAB40C-203ENST00000535977 Q8N1Y9 231 aa13.48□□□□□ -0.25
RAB40C-203ENST00000535977 C10orf126Q8N4M7 172 aa13.48□□□□□ -0.25
RAB40C-203ENST00000535977 C3orf56Q8N813 242 aa13.48□□□□□ -0.25
RAB40C-203ENST00000535977 NEXN-AS1Q8NBZ9 246 aa13.48□□□□□ -0.25
RAB40C-203ENST00000535977 SCGB3A1Q96QR1 104 aa13.48□□□□□ -0.25
RAB40C-203ENST00000535977 UBR5O95071 2799 aaPredicted RBP13.48□□□□□ -0.25
RAB40C-203ENST00000535977 CRYBG3Q68DQ2 2970 aa13.48□□□□□ -0.25
RAB40C-203ENST00000535977 BLCAPP62952 87 aa13.48□□□□□ -0.25
RAB40C-203ENST00000535977 C15orf53Q8NAA6 179 aa13.48□□□□□ -0.25
RAB40C-203ENST00000535977 NTN5Q8WTR8 489 aaPredicted RBP13.48□□□□□ -0.25
RAB40C-203ENST00000535977 RHPN1-AS1Q9BWJ2 59 aa13.48□□□□□ -0.25
RAB40C-203ENST00000535977 ABCA2Q9BZC7 2435 aa13.48□□□□□ -0.25
RAB40C-203ENST00000535977 IGHV3-11P01762 117 aa13.48□□□□□ -0.25
RAB40C-203ENST00000535977 RPL11P62913 178 aaKnown RBP13.48□□□□□ -0.25
RAB40C-203ENST00000535977 CFHR3Q02985 330 aa13.48□□□□□ -0.25
RAB40C-203ENST00000535977 AKAP6Q13023 2319 aa13.47□□□□□ -0.25
RAB40C-203ENST00000535977 PRR9Q5T870 116 aa13.47□□□□□ -0.25
RAB40C-203ENST00000535977 S100A4P26447 101 aaKnown RBP13.47□□□□□ -0.25
RAB40C-203ENST00000535977 TMEM89A2RUT3 159 aa13.46□□□□□ -0.25
RAB40C-203ENST00000535977 MDFICQ9P1T7 246 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms