RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 GATD1Q8NB37 220 aa11.52□□□□□ -0.57
VAMP1-205ENST00000535927 DPH3P1Q9H4G8 78 aa11.52□□□□□ -0.57
VAMP1-205ENST00000535927 CELA1Q9UNI1 258 aa11.52□□□□□ -0.57
VAMP1-205ENST00000535927 COL7A1Q02388 2944 aa11.52□□□□□ -0.57
VAMP1-205ENST00000535927 A0A1B0GXF2 115 aa11.51□□□□□ -0.57
VAMP1-205ENST00000535927 CRYGDP07320 174 aa11.51□□□□□ -0.57
VAMP1-205ENST00000535927 RAB4BP61018 213 aa11.51□□□□□ -0.57
VAMP1-205ENST00000535927 TRAV10A0A0B4J240 114 aa11.5□□□□□ -0.57
VAMP1-205ENST00000535927 H3BNG1 76 aa11.5□□□□□ -0.57
VAMP1-205ENST00000535927 ATRAIDQ6UW56 229 aa11.5□□□□□ -0.57
VAMP1-205ENST00000535927 NACAE9PAV3 2078 aa11.49□□□□□ -0.57
VAMP1-205ENST00000535927 TRBV6-4A0A1B0GX49 114 aa11.49□□□□□ -0.57
VAMP1-205ENST00000535927 H7C1H1 209 aa11.49□□□□□ -0.57
VAMP1-205ENST00000535927 ELOBQ15370 118 aa11.49□□□□□ -0.57
VAMP1-205ENST00000535927 UFSP1Q6NVU6 142 aa11.49□□□□□ -0.57
VAMP1-205ENST00000535927 POM121L12Q8N7R1 296 aa11.49□□□□□ -0.57
VAMP1-205ENST00000535927 MSRB1Q9NZV6 116 aa11.49□□□□□ -0.57
VAMP1-205ENST00000535927 KIF25-AS1Q9Y6Z4 181 aa11.49□□□□□ -0.57
VAMP1-205ENST00000535927 STAB2Q8WWQ8 2551 aa11.49□□□□□ -0.57
VAMP1-205ENST00000535927 TRGV4A0A0C4DH28 118 aa11.48□□□□□ -0.57
VAMP1-205ENST00000535927 MUC21A0A0G2JKD1 596 aa11.48□□□□□ -0.57
VAMP1-205ENST00000535927 MUC21A0A140T8X8 626 aa11.48□□□□□ -0.57
VAMP1-205ENST00000535927 PPP1R17O96001 155 aa11.48□□□□□ -0.57
VAMP1-205ENST00000535927 MT-ND6P03923 174 aa11.48□□□□□ -0.57
VAMP1-205ENST00000535927 EVI2AP22794 236 aa11.48□□□□□ -0.57
VAMP1-205ENST00000535927 C14orf178Q8N769 122 aaPredicted RBP11.48□□□□□ -0.57
VAMP1-205ENST00000535927 GNB1LQ9BYB4 327 aa11.48□□□□□ -0.57
VAMP1-205ENST00000535927 PRO0255Q9UI72 69 aa11.48□□□□□ -0.57
VAMP1-205ENST00000535927 URGCP-MRPS24S4R325 110 aa11.48□□□□□ -0.57
VAMP1-205ENST00000535927 IGHV3-53P01767 116 aa11.47□□□□□ -0.57
VAMP1-205ENST00000535927 NANOS2P60321 138 aaKnown RBP11.47□□□□□ -0.57
VAMP1-205ENST00000535927 FHL2Q14192 279 aa11.47□□□□□ -0.57
VAMP1-205ENST00000535927 MRPL54Q6P161 138 aaKnown RBP11.47□□□□□ -0.57
VAMP1-205ENST00000535927 WWC2-AS2Q96NR7 200 aa11.47□□□□□ -0.57
VAMP1-205ENST00000535927 DNAH9Q9NYC9 4486 aa11.47□□□□□ -0.57
VAMP1-205ENST00000535927 DEFB131BA0A096LNP1 70 aa11.46□□□□□ -0.57
VAMP1-205ENST00000535927 TRBV10-1A0A0K0K1A3 114 aa11.46□□□□□ -0.57
VAMP1-205ENST00000535927 HLA-DQA1P01909 254 aa11.46□□□□□ -0.57
VAMP1-205ENST00000535927 PPBPP02775 128 aa11.46□□□□□ -0.57
VAMP1-205ENST00000535927 GATA1P15976 413 aaPredicted RBP11.46□□□□□ -0.57
VAMP1-205ENST00000535927 CAMPP49913 170 aa11.46□□□□□ -0.57
VAMP1-205ENST00000535927 LINC00315P59091 139 aa11.46□□□□□ -0.57
VAMP1-205ENST00000535927 FAM104BQ5XKR9 115 aa11.46□□□□□ -0.57
VAMP1-205ENST00000535927 Q6ZTC4 211 aa11.46□□□□□ -0.57
VAMP1-205ENST00000535927 MRAP2Q96G30 205 aa11.46□□□□□ -0.57
VAMP1-205ENST00000535927 ZNF479Q96JC4 524 aa11.46□□□□□ -0.57
VAMP1-205ENST00000535927 HHLA3Q9XRX5 114 aa11.46□□□□□ -0.57
VAMP1-205ENST00000535927 TCTAP57738 103 aa11.45□□□□□ -0.58
VAMP1-205ENST00000535927 SSTP61278 116 aa11.45□□□□□ -0.58
VAMP1-205ENST00000535927 FAM74A4Q5TZK3 123 aa11.45□□□□□ -0.58
VAMP1-205ENST00000535927 SH2D6Q7Z4S9 175 aa11.45□□□□□ -0.58
VAMP1-205ENST00000535927 YPEL4Q96NS1 127 aa11.45□□□□□ -0.58
VAMP1-205ENST00000535927 PRADC1Q9BSG0 188 aa11.45□□□□□ -0.58
VAMP1-205ENST00000535927 JPT2Q9H910 190 aa11.45□□□□□ -0.58
VAMP1-205ENST00000535927 A0A087WWL8 130 aa11.44□□□□□ -0.58
VAMP1-205ENST00000535927 NUPR2A6NF83 97 aa11.44□□□□□ -0.58
VAMP1-205ENST00000535927 F5H697 171 aa11.44□□□□□ -0.58
VAMP1-205ENST00000535927 F5H768 121 aa11.44□□□□□ -0.58
VAMP1-205ENST00000535927 RHOHQ15669 191 aa11.44□□□□□ -0.58
VAMP1-205ENST00000535927 DNAJC30Q96LL9 226 aa11.44□□□□□ -0.58
VAMP1-205ENST00000535927 SAMD10Q9BYL1 202 aa11.44□□□□□ -0.58
VAMP1-205ENST00000535927 HUWE1Q7Z6Z7 4374 aaKnown RBP11.43□□□□□ -0.58
VAMP1-205ENST00000535927 RAB4AP20338 218 aa11.43□□□□□ -0.58
VAMP1-205ENST00000535927 CRYBA4P53673 196 aa11.43□□□□□ -0.58
VAMP1-205ENST00000535927 ZNF56Q15929 161 aa11.43□□□□□ -0.58
VAMP1-205ENST00000535927 TMEM88Q6PEY1 159 aa11.43□□□□□ -0.58
VAMP1-205ENST00000535927 PHLDA1Q8WV24 401 aaPredicted RBP11.43□□□□□ -0.58
VAMP1-205ENST00000535927 KLK5Q9Y337 293 aaPredicted RBP11.43□□□□□ -0.58
VAMP1-205ENST00000535927 PAX4O43316 350 aa11.42□□□□□ -0.58
VAMP1-205ENST00000535927 TMEM136Q6ZRR5 245 aa11.42□□□□□ -0.58
VAMP1-205ENST00000535927 CBLN2Q8IUK8 224 aa11.42□□□□□ -0.58
VAMP1-205ENST00000535927 C15orf53Q8NAA6 179 aa11.42□□□□□ -0.58
VAMP1-205ENST00000535927 LAMTOR2Q9Y2Q5 125 aa11.42□□□□□ -0.58
VAMP1-205ENST00000535927 K7EQD1 137 aa11.41□□□□□ -0.58
VAMP1-205ENST00000535927 PHOX2AO14813 284 aa11.41□□□□□ -0.58
VAMP1-205ENST00000535927 MGPP08493 103 aa11.41□□□□□ -0.58
VAMP1-205ENST00000535927 HOXA5P20719 270 aa11.41□□□□□ -0.58
VAMP1-205ENST00000535927 CEMP1Q6PRD7 247 aaPredicted RBP11.41□□□□□ -0.58
VAMP1-205ENST00000535927 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.41□□□□□ -0.58
VAMP1-205ENST00000535927 TGIF2-C20orf24A0A0A6YYL0 155 aa11.4□□□□□ -0.58
VAMP1-205ENST00000535927 M0QY20 66 aa11.4□□□□□ -0.58
VAMP1-205ENST00000535927 MRPL23Q16540 153 aaKnown RBP11.4□□□□□ -0.58
VAMP1-205ENST00000535927 AMN1Q8IY45 258 aa11.4□□□□□ -0.58
VAMP1-205ENST00000535927 SLC25A29Q8N8R3 303 aa11.4□□□□□ -0.58
VAMP1-205ENST00000535927 MUC7Q8TAX7 377 aa11.4□□□□□ -0.58
VAMP1-205ENST00000535927 RNF185Q96GF1 192 aa11.4□□□□□ -0.58
VAMP1-205ENST00000535927 NIT2Q9NQR4 276 aa11.4□□□□□ -0.58
VAMP1-205ENST00000535927 TRAV26-1A0A087WT03 109 aa11.39□□□□□ -0.59
VAMP1-205ENST00000535927 APCSP02743 223 aa11.39□□□□□ -0.59
VAMP1-205ENST00000535927 HTN3P15516 51 aa11.39□□□□□ -0.59
VAMP1-205ENST00000535927 RPL36AP83881 106 aaKnown RBP11.39□□□□□ -0.59
VAMP1-205ENST00000535927 SUMO4Q6EEV6 95 aa11.39□□□□□ -0.59
VAMP1-205ENST00000535927 RPL36ALQ969Q0 106 aaKnown RBP11.39□□□□□ -0.59
VAMP1-205ENST00000535927 TRBV7-3A0A075B6L6 115 aa11.38□□□□□ -0.59
VAMP1-205ENST00000535927 IGHV3-73A0A0B4J1V6 119 aa11.38□□□□□ -0.59
VAMP1-205ENST00000535927 COLCA2A8K830 154 aa11.38□□□□□ -0.59
VAMP1-205ENST00000535927 C3orf84H3BNL1 204 aa11.38□□□□□ -0.59
VAMP1-205ENST00000535927 SCO1O75880 301 aa11.38□□□□□ -0.59
VAMP1-205ENST00000535927 CKS2P33552 79 aa11.38□□□□□ -0.59
VAMP1-205ENST00000535927 MRPL51Q4U2R6 128 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms