RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 FXYD3Q14802 87 aa0.74□□□□□ -2.29
PRKDC-205ENST00000535375 SPINK9Q5DT21 86 aa0.74□□□□□ -2.29
PRKDC-205ENST00000535375 Q6ZS92 163 aa0.74□□□□□ -2.29
PRKDC-205ENST00000535375 SLC35B3Q9H1N7 401 aa0.74□□□□□ -2.29
PRKDC-205ENST00000535375 VPS13AQ96RL7 3174 aa0.74□□□□□ -2.29
PRKDC-205ENST00000535375 KDM5CP41229 1560 aa0.74□□□□□ -2.29
PRKDC-205ENST00000535375 LRBAP50851 2863 aa0.74□□□□□ -2.29
PRKDC-205ENST00000535375 UHRF1BP1LA0JNW5 1464 aa0.73□□□□□ -2.29
PRKDC-205ENST00000535375 TGP01266 2768 aa0.73□□□□□ -2.29
PRKDC-205ENST00000535375 HIGD1CA8MV81 97 aa0.73□□□□□ -2.29
PRKDC-205ENST00000535375 Q86TA4 180 aa0.73□□□□□ -2.29
PRKDC-205ENST00000535375 C5orf56Q8N8D9 126 aa0.73□□□□□ -2.29
PRKDC-205ENST00000535375 LINC00208Q96KT6 92 aa0.73□□□□□ -2.29
PRKDC-205ENST00000535375 PCNX1Q96RV3 2341 aa0.73□□□□□ -2.29
PRKDC-205ENST00000535375 MYH1P12882 1939 aa0.73□□□□□ -2.29
PRKDC-205ENST00000535375 RIF1Q5UIP0 2472 aaKnown RBP0.73□□□□□ -2.29
PRKDC-205ENST00000535375 CNOT1A5YKK6 2376 aaKnown RBP0.72□□□□□ -2.29
PRKDC-205ENST00000535375 IGF2RP11717 2491 aa0.72□□□□□ -2.29
PRKDC-205ENST00000535375 CXorf51AA0A1B0GTR3 108 aa0.72□□□□□ -2.29
PRKDC-205ENST00000535375 LOC101927531A0A1B0GV80 90 aa0.72□□□□□ -2.29
PRKDC-205ENST00000535375 IL7P13232 177 aa0.72□□□□□ -2.29
PRKDC-205ENST00000535375 CKS1BP61024 79 aa0.72□□□□□ -2.29
PRKDC-205ENST00000535375 HIST1H1AQ02539 215 aaPredicted RBP0.72□□□□□ -2.29
PRKDC-205ENST00000535375 GLYATL3Q5SZD4 288 aa0.72□□□□□ -2.29
PRKDC-205ENST00000535375 SLC25A26Q70HW3 274 aa0.72□□□□□ -2.29
PRKDC-205ENST00000535375 ANP32BQ92688 251 aaKnown RBP0.72□□□□□ -2.29
PRKDC-205ENST00000535375 ATG5Q9H1Y0 275 aa0.72□□□□□ -2.29
PRKDC-205ENST00000535375 C10orf95Q9H7T3 257 aa0.72□□□□□ -2.29
PRKDC-205ENST00000535375 GSKIPQ9P0R6 139 aa0.72□□□□□ -2.29
PRKDC-205ENST00000535375 MTORP42345 2549 aa0.72□□□□□ -2.29
PRKDC-205ENST00000535375 MDN1Q9NU22 5596 aa0.71□□□□□ -2.3
PRKDC-205ENST00000535375 COL7A1Q02388 2944 aa0.71□□□□□ -2.3
PRKDC-205ENST00000535375 TRAV2A0A0B4J234 112 aa0.71□□□□□ -2.3
PRKDC-205ENST00000535375 TSPAN19P0C672 248 aa0.71□□□□□ -2.3
PRKDC-205ENST00000535375 ATP6V0E2Q8NHE4 81 aa0.71□□□□□ -2.3
PRKDC-205ENST00000535375 TAS2R8Q9NYW2 309 aa0.71□□□□□ -2.3
PRKDC-205ENST00000535375 LSM2Q9Y333 95 aaKnown RBP0.71□□□□□ -2.3
PRKDC-205ENST00000535375 DMBT1Q9UGM3 2413 aaPredicted RBP0.71□□□□□ -2.3
PRKDC-205ENST00000535375 FRYQ5TBA9 3013 aa0.71□□□□□ -2.3
PRKDC-205ENST00000535375 HIVEP1P15822 2718 aa0.71□□□□□ -2.3
PRKDC-205ENST00000535375 CPDO75976 1380 aa0.7□□□□□ -2.3
PRKDC-205ENST00000535375 FRYLO94915 3013 aa0.7□□□□□ -2.3
PRKDC-205ENST00000535375 MUC5ACP98088 5654 aa0.7□□□□□ -2.3
PRKDC-205ENST00000535375 ZCCHC6Q5VYS8 1495 aaKnown RBP0.7□□□□□ -2.3
PRKDC-205ENST00000535375 M0R2P5 195 aa0.7□□□□□ -2.3
PRKDC-205ENST00000535375 ATP11AUNQ6ZP68 121 aa0.7□□□□□ -2.3
PRKDC-205ENST00000535375 PPDPFLQ8WWR9 84 aa0.7□□□□□ -2.3
PRKDC-205ENST00000535375 OVOS2A0A0J9YW53 1432 aa0.7□□□□□ -2.3
PRKDC-205ENST00000535375 OVOS2Q6IE36 1432 aa0.7□□□□□ -2.3
PRKDC-205ENST00000535375 SYNJ1O43426 1573 aa0.7□□□□□ -2.3
PRKDC-205ENST00000535375 CEP152O94986 1710 aa0.69□□□□□ -2.3
PRKDC-205ENST00000535375 HMCN2Q8NDA2 5059 aa0.69□□□□□ -2.3
PRKDC-205ENST00000535375 PRUNE2Q8WUY3 3088 aa0.69□□□□□ -2.3
PRKDC-205ENST00000535375 LOC400499M0QZD8 3231 aa0.69□□□□□ -2.3
PRKDC-205ENST00000535375 TRBV10-1A0A0K0K1A3 114 aa0.69□□□□□ -2.3
PRKDC-205ENST00000535375 YPEL1O60688 119 aa0.69□□□□□ -2.3
PRKDC-205ENST00000535375 IGLC6P0CF74 106 aa0.69□□□□□ -2.3
PRKDC-205ENST00000535375 MPC1LP0DKB6 136 aa0.69□□□□□ -2.3
PRKDC-205ENST00000535375 POLR2JP52435 117 aaKnown RBP0.69□□□□□ -2.3
PRKDC-205ENST00000535375 MAFIPQ8WZ33 124 aa0.69□□□□□ -2.3
PRKDC-205ENST00000535375 DSTQ03001 7570 aaKnown RBP0.69□□□□□ -2.3
PRKDC-205ENST00000535375 XIRP2A4UGR9 3374 aa0.69□□□□□ -2.3
PRKDC-205ENST00000535375 ITPR2Q14571 2701 aa0.68□□□□□ -2.3
PRKDC-205ENST00000535375 CDK12Q9NYV4 1490 aaPredicted RBP0.68□□□□□ -2.3
PRKDC-205ENST00000535375 DMXL2Q8TDJ6 3036 aa0.68□□□□□ -2.3
PRKDC-205ENST00000535375 HELZP42694 1942 aaKnown RBP0.68□□□□□ -2.3
PRKDC-205ENST00000535375 MGAM2Q2M2H8 2515 aa0.68□□□□□ -2.3
PRKDC-205ENST00000535375 FHAD1B1AJZ9 1412 aa0.68□□□□□ -2.3
PRKDC-205ENST00000535375 CCKP06307 115 aa0.68□□□□□ -2.3
PRKDC-205ENST00000535375 SPINT3P49223 89 aa0.68□□□□□ -2.3
PRKDC-205ENST00000535375 CLLU1Q5K131 121 aa0.68□□□□□ -2.3
PRKDC-205ENST00000535375 TRPM7Q96QT4 1865 aa0.68□□□□□ -2.3
PRKDC-205ENST00000535375 CDH23Q9H251 3354 aa0.68□□□□□ -2.3
PRKDC-205ENST00000535375 NINQ8N4C6 2090 aa0.68□□□□□ -2.3
PRKDC-205ENST00000535375 CCDC171Q6TFL3 1326 aa0.67□□□□□ -2.3
PRKDC-205ENST00000535375 SPTBP11277 2137 aa0.67□□□□□ -2.3
PRKDC-205ENST00000535375 DISP2A7MBM2 1401 aa0.67□□□□□ -2.3
PRKDC-205ENST00000535375 BLMP54132 1417 aaPredicted RBP0.67□□□□□ -2.3
PRKDC-205ENST00000535375 PRG4Q92954 1404 aaPredicted RBP0.67□□□□□ -2.3
PRKDC-205ENST00000535375 DMXL1Q9Y485 3027 aa0.67□□□□□ -2.3
PRKDC-205ENST00000535375 TRBV20-1A0A075B6N2 111 aa0.67□□□□□ -2.3
PRKDC-205ENST00000535375 RBP4P02753 201 aa0.67□□□□□ -2.3
PRKDC-205ENST00000535375 ZNF137PP52743 207 aa0.67□□□□□ -2.3
PRKDC-205ENST00000535375 UNQ5815/PRO19632Q6UWF5 114 aa0.67□□□□□ -2.3
PRKDC-205ENST00000535375 SNX29P2Q8IUI4 249 aa0.67□□□□□ -2.3
PRKDC-205ENST00000535375 MMGT1Q8N4V1 131 aa0.67□□□□□ -2.3
PRKDC-205ENST00000535375 LY6G6CO95867 125 aa0.66□□□□□ -2.3
PRKDC-205ENST00000535375 ZNF56Q15929 161 aa0.66□□□□□ -2.3
PRKDC-205ENST00000535375 IQCJQ1A5X6 159 aa0.66□□□□□ -2.3
PRKDC-205ENST00000535375 DYNLRB2Q8TF09 96 aa0.66□□□□□ -2.3
PRKDC-205ENST00000535375 NOP16Q9Y3C1 178 aaKnown RBP0.66□□□□□ -2.3
PRKDC-205ENST00000535375 RAPGEF6Q8TEU7 1601 aa0.66□□□□□ -2.3
PRKDC-205ENST00000535375 MED14O60244 1454 aa0.66□□□□□ -2.3
PRKDC-205ENST00000535375 ZZEF1O43149 2961 aa0.66□□□□□ -2.3
PRKDC-205ENST00000535375 FREM2Q5SZK8 3169 aa0.65□□□□□ -2.3
PRKDC-205ENST00000535375 APCP25054 2843 aa0.65□□□□□ -2.3
PRKDC-205ENST00000535375 FAM236AA0A1B0GUQ0 79 aa0.65□□□□□ -2.31
PRKDC-205ENST00000535375 FAM236BA0A1B0GV22 79 aa0.65□□□□□ -2.31
PRKDC-205ENST00000535375 NCR2O95944 276 aa0.65□□□□□ -2.31
PRKDC-205ENST00000535375 LINC00694P0DN24 101 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms