RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 COX8CQ7Z4L0 72 aa10.84□□□□□ -0.67
CLSTN3-204ENST00000535313 NTN5Q8WTR8 489 aaPredicted RBP10.84□□□□□ -0.67
CLSTN3-204ENST00000535313 SAMD10Q9BYL1 202 aa10.84□□□□□ -0.67
CLSTN3-204ENST00000535313 JPT2Q9H910 190 aa10.84□□□□□ -0.67
CLSTN3-204ENST00000535313 GRIFINA4D1Z8 144 aa10.83□□□□□ -0.68
CLSTN3-204ENST00000535313 LINC00694P0DN24 101 aa10.83□□□□□ -0.68
CLSTN3-204ENST00000535313 AKR1C3P42330 323 aa10.83□□□□□ -0.68
CLSTN3-204ENST00000535313 UFSP1Q6NVU6 142 aa10.83□□□□□ -0.68
CLSTN3-204ENST00000535313 TM2D2Q9BX73 214 aa10.83□□□□□ -0.68
CLSTN3-204ENST00000535313 PHLDA3Q9Y5J5 127 aa10.83□□□□□ -0.68
CLSTN3-204ENST00000535313 FAT1Q14517 4588 aa10.83□□□□□ -0.68
CLSTN3-204ENST00000535313 A0A087WWC5 75 aa10.82□□□□□ -0.68
CLSTN3-204ENST00000535313 TRBV6-1A0A0K0K1D8 114 aa10.82□□□□□ -0.68
CLSTN3-204ENST00000535313 ZNF674Q2M3X9 581 aa10.82□□□□□ -0.68
CLSTN3-204ENST00000535313 FAM74A4Q5TZK3 123 aa10.82□□□□□ -0.68
CLSTN3-204ENST00000535313 C14orf178Q8N769 122 aaPredicted RBP10.82□□□□□ -0.68
CLSTN3-204ENST00000535313 MBD3L1Q8WWY6 194 aa10.82□□□□□ -0.68
CLSTN3-204ENST00000535313 TMSB15BA0A087X1C1 80 aa10.81□□□□□ -0.68
CLSTN3-204ENST00000535313 UMAD1C9J7I0 102 aa10.81□□□□□ -0.68
CLSTN3-204ENST00000535313 LTAP01374 205 aa10.81□□□□□ -0.68
CLSTN3-204ENST00000535313 SULT1A2P50226 295 aa10.81□□□□□ -0.68
CLSTN3-204ENST00000535313 EIF5AP63241 154 aaKnown RBP10.81□□□□□ -0.68
CLSTN3-204ENST00000535313 LINC01559Q495D7 138 aa10.81□□□□□ -0.68
CLSTN3-204ENST00000535313 TOR2AQ5JU69 321 aa10.81□□□□□ -0.68
CLSTN3-204ENST00000535313 Q8N814 137 aa10.81□□□□□ -0.68
CLSTN3-204ENST00000535313 FAM213BQ8TBF2 198 aa10.81□□□□□ -0.68
CLSTN3-204ENST00000535313 FRZBQ92765 325 aa10.81□□□□□ -0.68
CLSTN3-204ENST00000535313 A0A087WWL8 130 aa10.8□□□□□ -0.68
CLSTN3-204ENST00000535313 TRAV8-3A0A0A6YYJ7 113 aa10.8□□□□□ -0.68
CLSTN3-204ENST00000535313 M0R381 172 aa10.8□□□□□ -0.68
CLSTN3-204ENST00000535313 PAGE4O60829 102 aa10.8□□□□□ -0.68
CLSTN3-204ENST00000535313 SFT2D1Q8WV19 159 aa10.8□□□□□ -0.68
CLSTN3-204ENST00000535313 Q9UF83 564 aa10.8□□□□□ -0.68
CLSTN3-204ENST00000535313 Q5VSD8 79 aa10.79□□□□□ -0.68
CLSTN3-204ENST00000535313 ALKAL2Q6UX46 152 aa10.79□□□□□ -0.68
CLSTN3-204ENST00000535313 ZFP82Q8N141 532 aa10.79□□□□□ -0.68
CLSTN3-204ENST00000535313 Q8N3U1 123 aa10.79□□□□□ -0.68
CLSTN3-204ENST00000535313 SFRP2Q96HF1 295 aa10.79□□□□□ -0.68
CLSTN3-204ENST00000535313 URGCP-MRPS24S4R325 110 aa10.79□□□□□ -0.68
CLSTN3-204ENST00000535313 S100A9P06702 114 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-204ENST00000535313 CCL20P78556 96 aa10.78□□□□□ -0.68
CLSTN3-204ENST00000535313 DAZ4Q86SG3 579 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-204ENST00000535313 TMEM70Q9BUB7 260 aa10.78□□□□□ -0.68
CLSTN3-204ENST00000535313 DAZ3Q9NR90 486 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-204ENST00000535313 A0A1B0GV50 99 aa10.77□□□□□ -0.69
CLSTN3-204ENST00000535313 INAFM2P0DMQ5 153 aa10.77□□□□□ -0.69
CLSTN3-204ENST00000535313 TRBV10-1A0A0K0K1A3 114 aa10.76□□□□□ -0.69
CLSTN3-204ENST00000535313 SMR3BP02814 79 aaPredicted RBP10.76□□□□□ -0.69
CLSTN3-204ENST00000535313 COX11Q9Y6N1 276 aa10.76□□□□□ -0.69
CLSTN3-204ENST00000535313 TRAV1-1A0A0B4J248 108 aa10.75□□□□□ -0.69
CLSTN3-204ENST00000535313 SCO2A0A1W2PP80 73 aa10.75□□□□□ -0.69
CLSTN3-204ENST00000535313 RPL36AP83881 106 aaKnown RBP10.75□□□□□ -0.69
CLSTN3-204ENST00000535313 KCNIP4Q6PIL6 250 aa10.75□□□□□ -0.69
CLSTN3-204ENST00000535313 BAGE2Q86Y30 109 aa10.75□□□□□ -0.69
CLSTN3-204ENST00000535313 RPL36ALQ969Q0 106 aaKnown RBP10.75□□□□□ -0.69
CLSTN3-204ENST00000535313 RMI2Q96E14 147 aa10.75□□□□□ -0.69
CLSTN3-204ENST00000535313 FAM229AH3BQW9 127 aa10.74□□□□□ -0.69
CLSTN3-204ENST00000535313 H2AFB1P0C5Y9 115 aa10.74□□□□□ -0.69
CLSTN3-204ENST00000535313 RAB5CP51148 216 aa10.74□□□□□ -0.69
CLSTN3-204ENST00000535313 HAMPP81172 84 aa10.74□□□□□ -0.69
CLSTN3-204ENST00000535313 EIF5AL1Q6IS14 154 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-204ENST00000535313 NIT1Q86X76 327 aa10.74□□□□□ -0.69
CLSTN3-204ENST00000535313 TRBV7-3A0A075B6L6 115 aa10.73□□□□□ -0.69
CLSTN3-204ENST00000535313 A0A087WX48 190 aa10.73□□□□□ -0.69
CLSTN3-204ENST00000535313 CXCL1P09341 107 aa10.73□□□□□ -0.69
CLSTN3-204ENST00000535313 RPL19P84098 196 aaKnown RBP10.73□□□□□ -0.69
CLSTN3-204ENST00000535313 WFDC2Q14508 124 aa10.73□□□□□ -0.69
CLSTN3-204ENST00000535313 VPS13BQ7Z7G8 4022 aa10.72□□□□□ -0.69
CLSTN3-204ENST00000535313 LECT2O14960 151 aa10.72□□□□□ -0.69
CLSTN3-204ENST00000535313 RAB4BP61018 213 aa10.72□□□□□ -0.69
CLSTN3-204ENST00000535313 UBE2D3P61077 147 aa10.72□□□□□ -0.69
CLSTN3-204ENST00000535313 UBE2D2P62837 147 aa10.72□□□□□ -0.69
CLSTN3-204ENST00000535313 ELOBQ15370 118 aa10.72□□□□□ -0.69
CLSTN3-204ENST00000535313 ZNF56Q15929 161 aa10.72□□□□□ -0.69
CLSTN3-204ENST00000535313 OR10AG1Q8NH19 301 aa10.72□□□□□ -0.69
CLSTN3-204ENST00000535313 CHCHD7Q9BUK0 85 aa10.72□□□□□ -0.69
CLSTN3-204ENST00000535313 MLST8Q9BVC4 326 aa10.72□□□□□ -0.69
CLSTN3-204ENST00000535313 KLK12Q9UKR0 248 aa10.72□□□□□ -0.69
CLSTN3-204ENST00000535313 DMBT1Q9UGM3 2413 aaPredicted RBP10.72□□□□□ -0.69
CLSTN3-204ENST00000535313 SRRM2Q9UQ35 2752 aaKnown RBP10.71□□□□□ -0.69
CLSTN3-204ENST00000535313 PRR27Q6MZM9 219 aa10.71□□□□□ -0.69
CLSTN3-204ENST00000535313 LYPD6BQ8NI32 183 aa10.71□□□□□ -0.69
CLSTN3-204ENST00000535313 BAALCQ8WXS3 180 aa10.71□□□□□ -0.69
CLSTN3-204ENST00000535313 DNAH8Q96JB1 4490 aa10.71□□□□□ -0.69
CLSTN3-204ENST00000535313 IGKV2D-24A0A075B6R9 120 aa10.7□□□□□ -0.7
CLSTN3-204ENST00000535313 SPANXN1Q5VSR9 72 aa10.7□□□□□ -0.7
CLSTN3-204ENST00000535313 TEX261Q6UWH6 196 aa10.7□□□□□ -0.7
CLSTN3-204ENST00000535313 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.7□□□□□ -0.7
CLSTN3-204ENST00000535313 OR10G8Q8NGN5 311 aa10.7□□□□□ -0.7
CLSTN3-204ENST00000535313 UBE2WQ96B02 151 aa10.7□□□□□ -0.7
CLSTN3-204ENST00000535313 FAM30AQ9NZY2 134 aa10.7□□□□□ -0.7
CLSTN3-204ENST00000535313 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.69□□□□□ -0.7
CLSTN3-204ENST00000535313 TMEM262E9PQX1 116 aa10.69□□□□□ -0.7
CLSTN3-204ENST00000535313 SNAI2O43623 268 aa10.69□□□□□ -0.7
CLSTN3-204ENST00000535313 OR5AL1P0C617 328 aa10.69□□□□□ -0.7
CLSTN3-204ENST00000535313 SSBP4Q9BWG4 385 aaPredicted RBP10.69□□□□□ -0.7
CLSTN3-204ENST00000535313 MANBALQ9NQG1 85 aa10.69□□□□□ -0.7
CLSTN3-204ENST00000535313 HERC1Q15751 4861 aa10.68□□□□□ -0.7
CLSTN3-204ENST00000535313 MUC21A0A0G2JKD1 596 aa10.68□□□□□ -0.7
CLSTN3-204ENST00000535313 MUC21A0A140T8X8 626 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms