RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 IGHG2P01859 326 aa14□□□□□ -0.17
SFSWAP-203ENST00000535236 KLK12Q9UKR0 248 aa14□□□□□ -0.17
SFSWAP-203ENST00000535236 H3BQ85 93 aa13.99□□□□□ -0.17
SFSWAP-203ENST00000535236 IL17DQ8TAD2 202 aa13.99□□□□□ -0.17
SFSWAP-203ENST00000535236 ACYP1P07311 99 aa13.99□□□□□ -0.17
SFSWAP-203ENST00000535236 CXCL5P42830 114 aa13.99□□□□□ -0.17
SFSWAP-203ENST00000535236 SPAG11BQ08648 103 aa13.99□□□□□ -0.17
SFSWAP-203ENST00000535236 Q6ZVH6 145 aa13.99□□□□□ -0.17
SFSWAP-203ENST00000535236 CITED1Q99966 193 aa13.99□□□□□ -0.17
SFSWAP-203ENST00000535236 HEATR5AQ86XA9 2040 aa13.99□□□□□ -0.17
SFSWAP-203ENST00000535236 RNF138Q8WVD3 245 aa13.99□□□□□ -0.17
SFSWAP-203ENST00000535236 NREPQ16612 68 aa13.98□□□□□ -0.17
SFSWAP-203ENST00000535236 TEX22C9J3V5 150 aa13.98□□□□□ -0.17
SFSWAP-203ENST00000535236 TSC2P49815 1807 aa13.97□□□□□ -0.17
SFSWAP-203ENST00000535236 NPSP0C0P6 89 aa13.97□□□□□ -0.17
SFSWAP-203ENST00000535236 MP68P56378 58 aa13.97□□□□□ -0.17
SFSWAP-203ENST00000535236 RPL39P62891 51 aaKnown RBP13.97□□□□□ -0.17
SFSWAP-203ENST00000535236 SEM1Q6ZVN7 128 aa13.97□□□□□ -0.17
SFSWAP-203ENST00000535236 CREBBPQ92793 2442 aa13.97□□□□□ -0.17
SFSWAP-203ENST00000535236 SIRPDQ9H106 197 aa13.97□□□□□ -0.17
SFSWAP-203ENST00000535236 C5orf47Q569G3 176 aa13.96□□□□□ -0.17
SFSWAP-203ENST00000535236 PLXND1Q9Y4D7 1925 aa13.96□□□□□ -0.17
SFSWAP-203ENST00000535236 DNAJC9-AS1A6NH13 148 aa13.96□□□□□ -0.18
SFSWAP-203ENST00000535236 CCL25O15444 150 aa13.96□□□□□ -0.18
SFSWAP-203ENST00000535236 A4D1N5 150 aa13.96□□□□□ -0.18
SFSWAP-203ENST00000535236 MED14OSP0DP75 135 aa13.96□□□□□ -0.18
SFSWAP-203ENST00000535236 IGLV1-47P01700 117 aa13.95□□□□□ -0.18
SFSWAP-203ENST00000535236 A0A1B0GX51 115 aa13.95□□□□□ -0.18
SFSWAP-203ENST00000535236 DAND5Q8N907 189 aa13.95□□□□□ -0.18
SFSWAP-203ENST00000535236 GTF3C1Q12789 2109 aa13.95□□□□□ -0.18
SFSWAP-203ENST00000535236 PCNX1Q96RV3 2341 aa13.95□□□□□ -0.18
SFSWAP-203ENST00000535236 TANC1Q9C0D5 1861 aa13.95□□□□□ -0.18
SFSWAP-203ENST00000535236 TMEM263Q8WUH6 116 aaKnown RBP13.94□□□□□ -0.18
SFSWAP-203ENST00000535236 LYPD6BQ8NI32 183 aa13.94□□□□□ -0.18
SFSWAP-203ENST00000535236 PRO0255Q9UI72 69 aa13.94□□□□□ -0.18
SFSWAP-203ENST00000535236 A6NDX4 124 aa13.93□□□□□ -0.18
SFSWAP-203ENST00000535236 TMEM61Q8N0U2 210 aa13.93□□□□□ -0.18
SFSWAP-203ENST00000535236 EML6Q6ZMW3 1958 aa13.93□□□□□ -0.18
SFSWAP-203ENST00000535236 DIRC1Q969H9 104 aa13.93□□□□□ -0.18
SFSWAP-203ENST00000535236 FRMPD3Q5JV73 1810 aa13.93□□□□□ -0.18
SFSWAP-203ENST00000535236 Q6ZSR3 168 aa13.93□□□□□ -0.18
SFSWAP-203ENST00000535236 DEFB125Q8N687 156 aa13.93□□□□□ -0.18
SFSWAP-203ENST00000535236 WFDC9Q8NEX5 89 aa13.92□□□□□ -0.18
SFSWAP-203ENST00000535236 DEFB1P60022 68 aa13.92□□□□□ -0.18
SFSWAP-203ENST00000535236 C11orf45Q8TAV5 145 aa13.92□□□□□ -0.18
SFSWAP-203ENST00000535236 TOMM6Q96B49 74 aa13.92□□□□□ -0.18
SFSWAP-203ENST00000535236 BAALCQ8WXS3 180 aa13.92□□□□□ -0.18
SFSWAP-203ENST00000535236 FBXL19-AS1Q494R0 122 aa13.91□□□□□ -0.18
SFSWAP-203ENST00000535236 FAM167A-AS1Q96KT0 104 aa13.91□□□□□ -0.18
SFSWAP-203ENST00000535236 KMT2EQ8IZD2 1858 aa13.91□□□□□ -0.18
SFSWAP-203ENST00000535236 LOXL1Q08397 574 aaPredicted RBP13.91□□□□□ -0.18
SFSWAP-203ENST00000535236 NLRC5Q86WI3 1866 aa13.91□□□□□ -0.18
SFSWAP-203ENST00000535236 MAP6D1Q9H9H5 199 aa13.9□□□□□ -0.18
SFSWAP-203ENST00000535236 TRBV12-3P01733 135 aa13.9□□□□□ -0.18
SFSWAP-203ENST00000535236 B9D2Q9BPU9 175 aa13.9□□□□□ -0.18
SFSWAP-203ENST00000535236 A0A0J9YX75 114 aa13.9□□□□□ -0.18
SFSWAP-203ENST00000535236 UNQ9165/PRO28630Q6UXU0 137 aa13.9□□□□□ -0.18
SFSWAP-203ENST00000535236 A0A0B4J2C4 111 aa13.9□□□□□ -0.18
SFSWAP-203ENST00000535236 C14orf177Q52M58 125 aa13.9□□□□□ -0.18
SFSWAP-203ENST00000535236 LINC00173Q6ZV60 143 aa13.9□□□□□ -0.18
SFSWAP-203ENST00000535236 ZGRF1Q86YA3 2104 aa13.9□□□□□ -0.18
SFSWAP-203ENST00000535236 PROP1O75360 226 aa13.89□□□□□ -0.19
SFSWAP-203ENST00000535236 NDUFA11Q86Y39 141 aa13.89□□□□□ -0.19
SFSWAP-203ENST00000535236 MYLKQ15746 1914 aa13.89□□□□□ -0.19
SFSWAP-203ENST00000535236 GTSF1Q8WW33 167 aa13.89□□□□□ -0.19
SFSWAP-203ENST00000535236 PRB2P02812 416 aaPredicted RBP13.89□□□□□ -0.19
SFSWAP-203ENST00000535236 ANKRD39Q53RE8 183 aa13.89□□□□□ -0.19
SFSWAP-203ENST00000535236 ODF3L1Q8IXM7 274 aa13.89□□□□□ -0.19
SFSWAP-203ENST00000535236 A0A1W2PNU3 283 aaPredicted RBP13.89□□□□□ -0.19
SFSWAP-203ENST00000535236 LECT2O14960 151 aa13.89□□□□□ -0.19
SFSWAP-203ENST00000535236 MDFICQ9P1T7 246 aa13.89□□□□□ -0.19
SFSWAP-203ENST00000535236 IGKV3D-7A0A0C4DH55 119 aa13.88□□□□□ -0.19
SFSWAP-203ENST00000535236 C14orf132Q9NPU4 83 aa13.88□□□□□ -0.19
SFSWAP-203ENST00000535236 SPANXCQ9NY87 97 aa13.88□□□□□ -0.19
SFSWAP-203ENST00000535236 TNFRSF13BO14836 293 aaPredicted RBP13.88□□□□□ -0.19
SFSWAP-203ENST00000535236 PSMB8P28062 276 aa13.87□□□□□ -0.19
SFSWAP-203ENST00000535236 HIGD2BQ4VC39 106 aa13.87□□□□□ -0.19
SFSWAP-203ENST00000535236 LRRC75A-AS1Q8N1F1 130 aa13.87□□□□□ -0.19
SFSWAP-203ENST00000535236 JMJD7-PLA2G4BH0Y9G9 81 aa13.87□□□□□ -0.19
SFSWAP-203ENST00000535236 MIR7-3HGQ8N6C7 128 aa13.87□□□□□ -0.19
SFSWAP-203ENST00000535236 NCKAP5O14513 1909 aa13.87□□□□□ -0.19
SFSWAP-203ENST00000535236 RNF183Q96D59 192 aa13.87□□□□□ -0.19
SFSWAP-203ENST00000535236 DYSFO75923 2080 aa13.86□□□□□ -0.19
SFSWAP-203ENST00000535236 CTRLP40313 264 aa13.86□□□□□ -0.19
SFSWAP-203ENST00000535236 C11orf86A6NJI1 115 aa13.86□□□□□ -0.19
SFSWAP-203ENST00000535236 LINC01620Q4KN68 170 aa13.86□□□□□ -0.19
SFSWAP-203ENST00000535236 IGKV2-24A0A0C4DH68 120 aa13.86□□□□□ -0.19
SFSWAP-203ENST00000535236 Q8NA96 180 aa13.86□□□□□ -0.19
SFSWAP-203ENST00000535236 SPRY4Q9C004 299 aa13.86□□□□□ -0.19
SFSWAP-203ENST00000535236 E7EUB6 86 aa13.85□□□□□ -0.19
SFSWAP-203ENST00000535236 TRBV10-1A0A0K0K1A3 114 aa13.85□□□□□ -0.19
SFSWAP-203ENST00000535236 H0Y9J4 135 aa13.85□□□□□ -0.19
SFSWAP-203ENST00000535236 MED13Q9UHV7 2174 aa13.84□□□□□ -0.19
SFSWAP-203ENST00000535236 NUP210Q8TEM1 1887 aaPredicted RBP13.84□□□□□ -0.19
SFSWAP-203ENST00000535236 E9PLD3 99 aa13.84□□□□□ -0.19
SFSWAP-203ENST00000535236 IGHV1-58A0A0C4DH39 117 aa13.83□□□□□ -0.19
SFSWAP-203ENST00000535236 LGALS9O00182 355 aa13.83□□□□□ -0.19
SFSWAP-203ENST00000535236 TRAV26-1A0A087WT03 109 aa13.83□□□□□ -0.2
SFSWAP-203ENST00000535236 COX7BP24311 80 aa13.83□□□□□ -0.2
SFSWAP-203ENST00000535236 WFDC11Q8NEX6 87 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms