RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 A0A0G2JLM5 398 aa4.37□□□□□ -1.71
TNFRSF1A-206ENST00000535038 C7orf71A4D174 169 aa4.37□□□□□ -1.71
TNFRSF1A-206ENST00000535038 TMEM8BA6NDV4 472 aa4.37□□□□□ -1.71
TNFRSF1A-206ENST00000535038 DPM2O94777 84 aa4.37□□□□□ -1.71
TNFRSF1A-206ENST00000535038 IGKCP01834 107 aa4.37□□□□□ -1.71
TNFRSF1A-206ENST00000535038 DSCR9P59020 149 aa4.37□□□□□ -1.71
TNFRSF1A-206ENST00000535038 DEFB1P60022 68 aa4.37□□□□□ -1.71
TNFRSF1A-206ENST00000535038 LY6EQ16553 131 aa4.37□□□□□ -1.71
TNFRSF1A-206ENST00000535038 OR10J6PQ8NGY7 276 aa4.37□□□□□ -1.71
TNFRSF1A-206ENST00000535038 PHLDA1Q8WV24 401 aaPredicted RBP4.37□□□□□ -1.71
TNFRSF1A-206ENST00000535038 TOMM6Q96B49 74 aa4.37□□□□□ -1.71
TNFRSF1A-206ENST00000535038 RHPN1-AS1Q9BWJ2 59 aa4.37□□□□□ -1.71
TNFRSF1A-206ENST00000535038 DPH3P1Q9H4G8 78 aa4.37□□□□□ -1.71
TNFRSF1A-206ENST00000535038 DAZ1Q9NQZ3 744 aaKnown RBP4.37□□□□□ -1.71
TNFRSF1A-206ENST00000535038 MRPL35Q9NZE8 188 aaKnown RBP4.37□□□□□ -1.71
TNFRSF1A-206ENST00000535038 PEF1Q9UBV8 284 aaKnown RBP4.37□□□□□ -1.71
TNFRSF1A-206ENST00000535038 TIMM8BQ9Y5J9 83 aaPredicted RBP4.37□□□□□ -1.71
TNFRSF1A-206ENST00000535038 AKAP9Q99996 3911 aa4.37□□□□□ -1.71
TNFRSF1A-206ENST00000535038 VPS13CQ709C8 3753 aa4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 PRRC2AP48634 2157 aaKnown RBP4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 TRBV6-5A0A0K0K1A5 114 aa4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 A8MTW9 85 aa4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 B4DSR2 109 aa4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 F6UB75 175 aa4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 J3QLI3 93 aa4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 IGHV3-11P01762 117 aa4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 PLA2G2AP14555 144 aa4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 EDN2P20800 178 aa4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 ASIPP42127 132 aa4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 POLR2KP53803 58 aaKnown RBP4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 ATP5J2P56134 94 aa4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 SPANXN1Q5VSR9 72 aa4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 AMMECR1LQ6DCA0 310 aa4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 SMIM15Q7Z3B0 74 aa4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 NEXN-AS1Q8NBZ9 246 aa4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 C9orf85Q96MD7 179 aa4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 C18orf15Q96N68 181 aa4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 FOXC2Q99958 501 aa4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 CR1P17927 2039 aa4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 ANK3Q12955 4377 aaKnown RBP4.36□□□□□ -1.71
TNFRSF1A-206ENST00000535038 CSPG4Q6UVK1 2322 aa4.35□□□□□ -1.71
TNFRSF1A-206ENST00000535038 SPG11Q96JI7 2443 aa4.35□□□□□ -1.71
TNFRSF1A-206ENST00000535038 IGSF10Q6WRI0 2623 aa4.35□□□□□ -1.71
TNFRSF1A-206ENST00000535038 TRBV7-3A0A075B6L6 115 aa4.35□□□□□ -1.71
TNFRSF1A-206ENST00000535038 TRBV25-1A0A075B6N4 114 aa4.35□□□□□ -1.71
TNFRSF1A-206ENST00000535038 A0A1B0GWB2 263 aa4.35□□□□□ -1.71
TNFRSF1A-206ENST00000535038 A6NDN8 102 aa4.35□□□□□ -1.71
TNFRSF1A-206ENST00000535038 F8VRH5 84 aa4.35□□□□□ -1.71
TNFRSF1A-206ENST00000535038 K7EQG2 157 aa4.35□□□□□ -1.71
TNFRSF1A-206ENST00000535038 LGALS9O00182 355 aa4.35□□□□□ -1.71
TNFRSF1A-206ENST00000535038 GNRH2O43555 120 aa4.35□□□□□ -1.71
TNFRSF1A-206ENST00000535038 RNASE4P34096 147 aaKnown RBP4.35□□□□□ -1.71
TNFRSF1A-206ENST00000535038 CDKN1BP46527 198 aa4.35□□□□□ -1.71
TNFRSF1A-206ENST00000535038 VAMP3Q15836 100 aa4.35□□□□□ -1.71
TNFRSF1A-206ENST00000535038 TAL2Q16559 108 aa4.35□□□□□ -1.71
TNFRSF1A-206ENST00000535038 ORMDL2Q53FV1 153 aa4.35□□□□□ -1.71
TNFRSF1A-206ENST00000535038 MAPKAPK5-AS1Q8N8E1 139 aa4.35□□□□□ -1.71
TNFRSF1A-206ENST00000535038 RPL39LQ96EH5 51 aaKnown RBP4.35□□□□□ -1.71
TNFRSF1A-206ENST00000535038 UFC1Q9Y3C8 167 aa4.35□□□□□ -1.71
TNFRSF1A-206ENST00000535038 ASH1LQ9NR48 2969 aaKnown RBP4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 IGHV3-16A0A0C4DH30 117 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 A0A0J9YX75 114 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 H7C1H1 209 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 K7EP34 96 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 PPP1R17O96001 155 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 TSHBP01222 138 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 IGHV4-59P01825 116 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 CRYGDP07320 174 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 PRSS1P07477 247 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 PLNP26678 52 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 NMUP48645 174 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 FXYD2P54710 66 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 RIPPLY3P57055 190 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 DEFB112Q30KQ8 113 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 TMEM95Q3KNT9 176 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 ZC2HC1BQ5TFG8 222 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 AMTNQ6UX39 209 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 ERASQ7Z444 233 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 GTSCR1Q86UQ5 136 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 OR4C5Q8NGB2 326 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 BAALCQ8WXS3 180 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 AP1S3Q96PC3 154 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 CHAC1Q9BUX1 264 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 TTTY13Q9BZ97 58 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 EDA2RQ9HAV5 297 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 MDFICQ9P1T7 246 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 ZNF256Q9Y2P7 627 aaPredicted RBP4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 CBY1Q9Y3M2 126 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 AGRNO00468 2067 aa4.34□□□□□ -1.71
TNFRSF1A-206ENST00000535038 FLNCQ14315 2725 aa4.34□□□□□ -1.72
TNFRSF1A-206ENST00000535038 A0A1W2PPM0 123 aa4.33□□□□□ -1.72
TNFRSF1A-206ENST00000535038 LINC01549A6NIU2 74 aa4.33□□□□□ -1.72
TNFRSF1A-206ENST00000535038 IGIPA6NJ69 53 aa4.33□□□□□ -1.72
TNFRSF1A-206ENST00000535038 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.33□□□□□ -1.72
TNFRSF1A-206ENST00000535038 LGALS1P09382 135 aaKnown RBP4.33□□□□□ -1.72
TNFRSF1A-206ENST00000535038 COX6B1P14854 86 aa4.33□□□□□ -1.72
TNFRSF1A-206ENST00000535038 ID1P41134 155 aa4.33□□□□□ -1.72
TNFRSF1A-206ENST00000535038 ODF3L2Q3SX64 289 aa4.33□□□□□ -1.72
TNFRSF1A-206ENST00000535038 MORN3Q6PF18 240 aaPredicted RBP4.33□□□□□ -1.72
TNFRSF1A-206ENST00000535038 C10orf99Q6UWK7 81 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms