RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 C14orf178Q8N769 122 aaPredicted RBP6.69□□□□□ -1.34
CLSTN3-203ENST00000534830 NTN5Q8WTR8 489 aaPredicted RBP6.69□□□□□ -1.34
CLSTN3-203ENST00000534830 MBD3L1Q8WWY6 194 aa6.69□□□□□ -1.34
CLSTN3-203ENST00000534830 GAGE12JA6NER3 117 aa6.68□□□□□ -1.34
CLSTN3-203ENST00000534830 HMSDA8MTL9 139 aa6.68□□□□□ -1.34
CLSTN3-203ENST00000534830 SMLR1H3BR10 107 aa6.68□□□□□ -1.34
CLSTN3-203ENST00000534830 SEC11BP0C7V7 166 aa6.68□□□□□ -1.34
CLSTN3-203ENST00000534830 GAGE1Q13065 139 aa6.68□□□□□ -1.34
CLSTN3-203ENST00000534830 GAGE4Q13068 117 aa6.68□□□□□ -1.34
CLSTN3-203ENST00000534830 GAGE5Q13069 117 aa6.68□□□□□ -1.34
CLSTN3-203ENST00000534830 GAGE13Q4V321 117 aa6.68□□□□□ -1.34
CLSTN3-203ENST00000534830 Q8N814 137 aa6.68□□□□□ -1.34
CLSTN3-203ENST00000534830 OR11H4Q8NGC9 324 aa6.68□□□□□ -1.34
CLSTN3-203ENST00000534830 SFRP2Q96HF1 295 aa6.68□□□□□ -1.34
CLSTN3-203ENST00000534830 TMEM70Q9BUB7 260 aa6.68□□□□□ -1.34
CLSTN3-203ENST00000534830 GRIFINA4D1Z8 144 aa6.67□□□□□ -1.34
CLSTN3-203ENST00000534830 M0R036 132 aa6.67□□□□□ -1.34
CLSTN3-203ENST00000534830 RHODO00212 210 aa6.67□□□□□ -1.34
CLSTN3-203ENST00000534830 PSCAO43653 123 aa6.67□□□□□ -1.34
CLSTN3-203ENST00000534830 PAGE4O60829 102 aa6.67□□□□□ -1.34
CLSTN3-203ENST00000534830 UBE2G1P62253 170 aa6.67□□□□□ -1.34
CLSTN3-203ENST00000534830 STOML3Q8TAV4 291 aa6.67□□□□□ -1.34
CLSTN3-203ENST00000534830 MLST8Q9BVC4 326 aa6.67□□□□□ -1.34
CLSTN3-203ENST00000534830 Q9HAA7 133 aa6.67□□□□□ -1.34
CLSTN3-203ENST00000534830 LRP1Q07954 4544 aaKnown RBP6.67□□□□□ -1.34
CLSTN3-203ENST00000534830 A0A087WWC5 75 aa6.66□□□□□ -1.34
CLSTN3-203ENST00000534830 WFDC2Q14508 124 aa6.66□□□□□ -1.34
CLSTN3-203ENST00000534830 CST9LP1Q5W188 147 aa6.66□□□□□ -1.34
CLSTN3-203ENST00000534830 DAZ4Q86SG3 579 aaKnown RBP6.66□□□□□ -1.34
CLSTN3-203ENST00000534830 DAZ3Q9NR90 486 aaKnown RBP6.66□□□□□ -1.34
CLSTN3-203ENST00000534830 A0A087WWL8 130 aa6.65□□□□□ -1.34
CLSTN3-203ENST00000534830 IGLV5-52A0A0A0MRZ9 124 aa6.65□□□□□ -1.34
CLSTN3-203ENST00000534830 A0A0D9SG52 128 aa6.65□□□□□ -1.34
CLSTN3-203ENST00000534830 UMAD1C9J7I0 102 aa6.65□□□□□ -1.34
CLSTN3-203ENST00000534830 C1QBP02746 253 aa6.65□□□□□ -1.34
CLSTN3-203ENST00000534830 S100A9P06702 114 aaKnown RBP6.65□□□□□ -1.34
CLSTN3-203ENST00000534830 CXCL1P09341 107 aa6.65□□□□□ -1.34
CLSTN3-203ENST00000534830 TPT1P13693 172 aaKnown RBP6.65□□□□□ -1.34
CLSTN3-203ENST00000534830 AKR1C3P42330 323 aa6.65□□□□□ -1.34
CLSTN3-203ENST00000534830 NIT1Q86X76 327 aa6.65□□□□□ -1.34
CLSTN3-203ENST00000534830 SSBP4Q9BWG4 385 aaPredicted RBP6.65□□□□□ -1.34
CLSTN3-203ENST00000534830 TM2D2Q9BX73 214 aa6.65□□□□□ -1.34
CLSTN3-203ENST00000534830 FAM30AQ9NZY2 134 aa6.65□□□□□ -1.34
CLSTN3-203ENST00000534830 PHLDA3Q9Y5J5 127 aa6.65□□□□□ -1.34
CLSTN3-203ENST00000534830 RNF213Q63HN8 5207 aa6.65□□□□□ -1.35
CLSTN3-203ENST00000534830 TRAV8-3A0A0A6YYJ7 113 aa6.64□□□□□ -1.35
CLSTN3-203ENST00000534830 TRBV10-1A0A0K0K1A3 114 aa6.64□□□□□ -1.35
CLSTN3-203ENST00000534830 SCO2A0A1W2PP80 73 aa6.64□□□□□ -1.35
CLSTN3-203ENST00000534830 SNAI2O43623 268 aa6.64□□□□□ -1.35
CLSTN3-203ENST00000534830 UBE2D3P61077 147 aa6.64□□□□□ -1.35
CLSTN3-203ENST00000534830 UBE2D2P62837 147 aa6.64□□□□□ -1.35
CLSTN3-203ENST00000534830 FAM74A4Q5TZK3 123 aa6.64□□□□□ -1.35
CLSTN3-203ENST00000534830 ZFP82Q8N141 532 aa6.64□□□□□ -1.35
CLSTN3-203ENST00000534830 LINC00528Q8N1L1 170 aa6.64□□□□□ -1.35
CLSTN3-203ENST00000534830 OR10G8Q8NGN5 311 aa6.64□□□□□ -1.35
CLSTN3-203ENST00000534830 SFT2D1Q8WV19 159 aa6.64□□□□□ -1.35
CLSTN3-203ENST00000534830 TRBV7-3A0A075B6L6 115 aa6.63□□□□□ -1.35
CLSTN3-203ENST00000534830 TMSB15BA0A087X1C1 80 aa6.63□□□□□ -1.35
CLSTN3-203ENST00000534830 M0R381 172 aa6.63□□□□□ -1.35
CLSTN3-203ENST00000534830 BCL2L11O43521 198 aa6.63□□□□□ -1.35
CLSTN3-203ENST00000534830 OXTP01178 125 aa6.63□□□□□ -1.35
CLSTN3-203ENST00000534830 RPL19P84098 196 aaKnown RBP6.63□□□□□ -1.35
CLSTN3-203ENST00000534830 TOR2AQ5JU69 321 aa6.63□□□□□ -1.35
CLSTN3-203ENST00000534830 PRR27Q6MZM9 219 aa6.63□□□□□ -1.35
CLSTN3-203ENST00000534830 Q6ZSA8 131 aa6.63□□□□□ -1.35
CLSTN3-203ENST00000534830 FAM213BQ8TBF2 198 aa6.63□□□□□ -1.35
CLSTN3-203ENST00000534830 CHCHD7Q9BUK0 85 aa6.63□□□□□ -1.35
CLSTN3-203ENST00000534830 OR5AL1P0C617 328 aa6.62□□□□□ -1.35
CLSTN3-203ENST00000534830 RAB4BP61018 213 aa6.62□□□□□ -1.35
CLSTN3-203ENST00000534830 ATRAIDQ6UW56 229 aa6.62□□□□□ -1.35
CLSTN3-203ENST00000534830 TMUB2Q71RG4 321 aa6.62□□□□□ -1.35
CLSTN3-203ENST00000534830 BAGE2Q86Y30 109 aa6.62□□□□□ -1.35
CLSTN3-203ENST00000534830 OR10AG1Q8NH19 301 aa6.62□□□□□ -1.35
CLSTN3-203ENST00000534830 DNAJC30Q96LL9 226 aa6.62□□□□□ -1.35
CLSTN3-203ENST00000534830 ZNF471Q9BX82 626 aaPredicted RBP6.62□□□□□ -1.35
CLSTN3-203ENST00000534830 COX11Q9Y6N1 276 aa6.62□□□□□ -1.35
CLSTN3-203ENST00000534830 FAT3Q8TDW7 4589 aa6.62□□□□□ -1.35
CLSTN3-203ENST00000534830 TRAV1-1A0A0B4J248 108 aa6.61□□□□□ -1.35
CLSTN3-203ENST00000534830 KANTRA0A1W2PQU2 76 aa6.61□□□□□ -1.35
CLSTN3-203ENST00000534830 H2AFB1P0C5Y9 115 aa6.61□□□□□ -1.35
CLSTN3-203ENST00000534830 RPL36AP83881 106 aaKnown RBP6.61□□□□□ -1.35
CLSTN3-203ENST00000534830 NEXN-AS1Q8NBZ9 246 aa6.61□□□□□ -1.35
CLSTN3-203ENST00000534830 RPL36ALQ969Q0 106 aaKnown RBP6.61□□□□□ -1.35
CLSTN3-203ENST00000534830 KIF25-AS1Q9Y6Z4 181 aa6.61□□□□□ -1.35
CLSTN3-203ENST00000534830 A0A1B0GV50 99 aa6.6□□□□□ -1.35
CLSTN3-203ENST00000534830 PFDN1O60925 122 aa6.6□□□□□ -1.35
CLSTN3-203ENST00000534830 EIF5AP63241 154 aaKnown RBP6.6□□□□□ -1.35
CLSTN3-203ENST00000534830 CCL20P78556 96 aa6.6□□□□□ -1.35
CLSTN3-203ENST00000534830 BAALCQ8WXS3 180 aa6.6□□□□□ -1.35
CLSTN3-203ENST00000534830 C11orf52Q96A22 123 aa6.6□□□□□ -1.35
CLSTN3-203ENST00000534830 KLK12Q9UKR0 248 aa6.6□□□□□ -1.35
CLSTN3-203ENST00000534830 TRBV6-8A0A0A6YYG3 113 aa6.59□□□□□ -1.35
CLSTN3-203ENST00000534830 LECT2O14960 151 aa6.59□□□□□ -1.35
CLSTN3-203ENST00000534830 IGLV2-8P01709 118 aa6.59□□□□□ -1.35
CLSTN3-203ENST00000534830 RPL35P42766 123 aaKnown RBP6.59□□□□□ -1.35
CLSTN3-203ENST00000534830 RMI2Q96E14 147 aa6.59□□□□□ -1.35
CLSTN3-203ENST00000534830 DERL1Q9BUN8 251 aa6.59□□□□□ -1.35
CLSTN3-203ENST00000534830 MANBALQ9NQG1 85 aa6.59□□□□□ -1.35
CLSTN3-203ENST00000534830 VAX2Q9UIW0 290 aa6.59□□□□□ -1.35
CLSTN3-203ENST00000534830 URGCP-MRPS24S4R325 110 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms