RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 ANXA10Q9UJ72 324 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 SPCS1Q9Y6A9 102 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 WNK1Q9H4A3 2382 aa2.3□□□□□ -2.04
USP48-215ENST00000534705 VWFP04275 2813 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 TET2Q6N021 2002 aaPredicted RBP2.29□□□□□ -2.04
USP48-215ENST00000534705 TRGV10A0A0A0MS01 117 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 IGKV1D-13A0A0B4J2D9 117 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 PIGBOS1A0A0B4J2F0 54 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 A0A1B0GX51 115 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 A0A1B0GXF2 115 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 SMIM9A6NGZ8 99 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 OR4C46A6NHA9 309 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 FABP5P3A8MUU1 101 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 ZNF878C9JN71 531 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 F5H768 121 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 LINC01619G3V211 115 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 H3BMG7 143 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 H3BUT2 72 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 J3QLI3 93 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 M0R135 149 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 PPYP01298 95 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 IGLV1-47P01700 117 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 TTRP02766 147 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 PRB2P02812 416 aaPredicted RBP2.29□□□□□ -2.04
USP48-215ENST00000534705 SPINK8P0C7L1 97 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 IGKV1-13P0DP09 117 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 HLA-DRB4P13762 266 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 EVI2AP22794 236 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 APOC4P55056 127 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 OR8B8Q15620 311 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 PSMG4Q5JS54 123 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 FAM201AQ5SY85 155 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 GLIPR1L1Q6UWM5 242 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 PP632Q6XCG6 107 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 ZNF695Q8IW36 515 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 NKAPP1Q8N9T2 125 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 GATD1Q8NB37 220 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 OR10J6PQ8NGY7 276 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 ZNRF2Q8NHG8 242 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 BORCS7Q96B45 105 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 CHCHD1Q96BP2 118 aaKnown RBP2.29□□□□□ -2.04
USP48-215ENST00000534705 ADAT3Q96EY9 351 aaPredicted RBP2.29□□□□□ -2.04
USP48-215ENST00000534705 ZNF799Q96GE5 643 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 ARHGAP5-AS1Q96IT6 56 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 ZNF488Q96MN9 340 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 IFI27L2Q9H2X8 130 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.29□□□□□ -2.04
USP48-215ENST00000534705 SLC39A9Q9NUM3 307 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 TP73-AS1Q9UF72 201 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 HLA-DRB4X5D2U9 266 aa2.29□□□□□ -2.04
USP48-215ENST00000534705 IGKV1-9A0A0C4DH69 117 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 IGHV3-64DA0A0J9YX35 117 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 C3orf85A0A1B0GTC6 90 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 MDFIC2A0A1B0GVS7 189 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 A0A1W2PRE2 83 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 H7C1H1 209 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 ISLRO14498 428 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 CST7O76096 145 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 FSTL3O95633 263 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 LHBP01229 141 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 IGLV2-8P01709 118 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 MT-ATP8P03928 68 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 MSMBP08118 114 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 HIST1H1EP10412 219 aaKnown RBP2.28□□□□□ -2.04
USP48-215ENST00000534705 FABP2P12104 132 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 ZNF823P16415 610 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 COX7A1P24310 79 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 OPRK1P41145 380 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 OR3A4PP47883 348 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 PSMB2P49721 201 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 TNFAIP6P98066 277 aaPredicted RBP2.28□□□□□ -2.04
USP48-215ENST00000534705 ATP5G2Q06055 141 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 WFDC2Q14508 124 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 KIAA0087Q14695 138 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 SP6Q3SY56 376 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 TMEM155Q4W5P6 130 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 ZFAND6Q6FIF0 208 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 LYPD2Q6UXB3 125 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 ZNF826PQ6ZT77 177 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 FAM231DQ6ZW35 169 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 ATOH7Q8N100 152 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 CEND1Q8N111 149 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 FAM19A2Q8N3H0 131 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.28□□□□□ -2.04
USP48-215ENST00000534705 OR8B12Q8NGG6 310 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 KIR2DL5BQ8NHK3 375 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 MYOZ3Q8TDC0 251 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 C16orf74Q96GX8 76 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 ZC2HC1AQ96GY0 325 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 OR4C12Q96R67 309 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 LINC01587Q99440 93 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 C20orf78Q9BR46 151 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 TMEM191AQ9H0A3 160 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 Q9H3A6 140 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 SPANXCQ9NY87 97 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 INSIG2Q9Y5U4 225 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 MPC1Q9Y5U8 109 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 NBEAL1Q6ZS30 2694 aa2.28□□□□□ -2.04
USP48-215ENST00000534705 PRKDCP78527 4128 aaKnown RBP2.28□□□□□ -2.04
USP48-215ENST00000534705 TNCP24821 2201 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms