RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 IGKV2-24A0A0C4DH68 120 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 A0A1B0GW15 77 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 hDV102S1A0JD36 115 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 SMLR1H3BR10 107 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 CTDSP2O14595 271 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 DLEU1O43261 78 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 SCO1O75880 301 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 TCRBP04435 133 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 TYMSP04818 313 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 CAV2P51636 162 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 FGF8P55075 233 aaPredicted RBP3.94□□□□□ -1.78
CD44-237ENST00000534082 TAS2R19P59542 299 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 SRPXP78539 464 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 PDE6HQ13956 83 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 Q6ZRP5 223 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 STPG4Q8N801 248 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 TMEM229BQ8NBD8 167 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 AAMDCQ9H7C9 122 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 GEMIN7Q9H840 131 aaKnown RBP3.94□□□□□ -1.78
CD44-237ENST00000534082 GPN1Q9HCN4 374 aaPredicted RBP3.94□□□□□ -1.78
CD44-237ENST00000534082 NPVFQ9HCQ7 196 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 NIT2Q9NQR4 276 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 SLC39A9Q9NUM3 307 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 CCDC59Q9P031 241 aaKnown RBP3.94□□□□□ -1.78
CD44-237ENST00000534082 MTFP1Q9UDX5 166 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 Q9UF83 564 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 GPR132Q9UNW8 380 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 TIMM9Q9Y5J7 89 aa3.94□□□□□ -1.78
CD44-237ENST00000534082 FNDC10F2Z333 226 aa3.93□□□□□ -1.78
CD44-237ENST00000534082 CTDSPLO15194 276 aa3.93□□□□□ -1.78
CD44-237ENST00000534082 ANXA3P12429 323 aa3.93□□□□□ -1.78
CD44-237ENST00000534082 TGFBR1P36897 503 aa3.93□□□□□ -1.78
CD44-237ENST00000534082 MIAQ16674 131 aa3.93□□□□□ -1.78
CD44-237ENST00000534082 DNLZQ5SXM8 178 aa3.93□□□□□ -1.78
CD44-237ENST00000534082 KRTAP26-1Q6PEX3 210 aa3.93□□□□□ -1.78
CD44-237ENST00000534082 ZFP82Q8N141 532 aa3.93□□□□□ -1.78
CD44-237ENST00000534082 TMEM75Q8N9X5 138 aa3.93□□□□□ -1.78
CD44-237ENST00000534082 LINC00479Q96M42 142 aa3.93□□□□□ -1.78
CD44-237ENST00000534082 GGACTQ9BVM4 153 aa3.93□□□□□ -1.78
CD44-237ENST00000534082 SAMD10Q9BYL1 202 aa3.93□□□□□ -1.78
CD44-237ENST00000534082 COMMD3Q9UBI1 195 aa3.93□□□□□ -1.78
CD44-237ENST00000534082 DUXBA0A1W2PPF3 345 aa3.92□□□□□ -1.78
CD44-237ENST00000534082 TMEM262E9PQX1 116 aa3.92□□□□□ -1.78
CD44-237ENST00000534082 EIF3GO75821 320 aaKnown RBP eCLIP3.92□□□□□ -1.78
CD44-237ENST00000534082 ANGP03950 147 aaKnown RBP3.92□□□□□ -1.78
CD44-237ENST00000534082 HOXB5P09067 269 aa3.92□□□□□ -1.78
CD44-237ENST00000534082 PYYP10082 97 aa3.92□□□□□ -1.78
CD44-237ENST00000534082 SLC25A6P12236 298 aa3.92□□□□□ -1.78
CD44-237ENST00000534082 LINC01547P58512 204 aaPredicted RBP3.92□□□□□ -1.78
CD44-237ENST00000534082 GABARAPL2P60520 117 aa3.92□□□□□ -1.78
CD44-237ENST00000534082 COX6A2Q02221 97 aa3.92□□□□□ -1.78
CD44-237ENST00000534082 MPV17L2Q567V2 206 aa3.92□□□□□ -1.78
CD44-237ENST00000534082 ZNF506Q5JVG8 444 aa3.92□□□□□ -1.78
CD44-237ENST00000534082 CLPSL2Q6UWE3 100 aa3.92□□□□□ -1.78
CD44-237ENST00000534082 OR2T35Q8NGX2 323 aa3.92□□□□□ -1.78
CD44-237ENST00000534082 SFT2D1Q8WV19 159 aa3.92□□□□□ -1.78
CD44-237ENST00000534082 MGST2Q99735 147 aa3.92□□□□□ -1.78
CD44-237ENST00000534082 MRPS26Q9BYN8 205 aaKnown RBP3.92□□□□□ -1.78
CD44-237ENST00000534082 SDF2L1Q9HCN8 221 aa3.92□□□□□ -1.78
CD44-237ENST00000534082 TMEM14CQ9P0S9 112 aa3.92□□□□□ -1.78
CD44-237ENST00000534082 PIGBOS1A0A0B4J2F0 54 aa3.91□□□□□ -1.78
CD44-237ENST00000534082 A0A1B0GV72 72 aa3.91□□□□□ -1.78
CD44-237ENST00000534082 DISC1C4P0D8 188 aa3.91□□□□□ -1.78
CD44-237ENST00000534082 HPGDSO60760 199 aa3.91□□□□□ -1.78
CD44-237ENST00000534082 METTL15P1P0C7V9 234 aa3.91□□□□□ -1.78
CD44-237ENST00000534082 RAB32Q13637 225 aa3.91□□□□□ -1.78
CD44-237ENST00000534082 IZUMO2Q6UXV1 221 aa3.91□□□□□ -1.78
CD44-237ENST00000534082 C14orf178Q8N769 122 aaPredicted RBP3.91□□□□□ -1.78
CD44-237ENST00000534082 OR10G7Q8NGN6 311 aa3.91□□□□□ -1.78
CD44-237ENST00000534082 OR1L4Q8NGR5 311 aa3.91□□□□□ -1.78
CD44-237ENST00000534082 ASB13Q8WXK3 278 aa3.91□□□□□ -1.78
CD44-237ENST00000534082 CNBD2Q96M20 576 aa3.91□□□□□ -1.78
CD44-237ENST00000534082 PARLQ9H300 379 aa3.91□□□□□ -1.78
CD44-237ENST00000534082 PSENENQ9NZ42 101 aa3.91□□□□□ -1.78
CD44-237ENST00000534082 A0A087WWL8 130 aa3.9□□□□□ -1.79
CD44-237ENST00000534082 TRAV21A0A0B4J279 112 aa3.9□□□□□ -1.79
CD44-237ENST00000534082 FAM240BA0A1B0GVZ2 78 aa3.9□□□□□ -1.79
CD44-237ENST00000534082 TEX46H3BTG2 121 aa3.9□□□□□ -1.79
CD44-237ENST00000534082 IFNA7P01567 189 aa3.9□□□□□ -1.79
CD44-237ENST00000534082 SCGB1A1P11684 91 aa3.9□□□□□ -1.79
CD44-237ENST00000534082 MALP21145 153 aa3.9□□□□□ -1.79
CD44-237ENST00000534082 HERV-K104P63124 156 aa3.9□□□□□ -1.79
CD44-237ENST00000534082 C5orf47Q569G3 176 aa3.9□□□□□ -1.79
CD44-237ENST00000534082 TMEM14EPQ6UXP3 125 aa3.9□□□□□ -1.79
CD44-237ENST00000534082 ZFP2Q6ZN57 461 aa3.9□□□□□ -1.79
CD44-237ENST00000534082 Q6ZRG5 221 aa3.9□□□□□ -1.79
CD44-237ENST00000534082 C12orf45Q8N5I9 185 aaPredicted RBP3.9□□□□□ -1.79
CD44-237ENST00000534082 OR2G3Q8NGZ4 309 aa3.9□□□□□ -1.79
CD44-237ENST00000534082 PRSS3P2Q8NHM4 247 aa3.9□□□□□ -1.79
CD44-237ENST00000534082 KCNS1Q96KK3 526 aa3.9□□□□□ -1.79
CD44-237ENST00000534082 LENEPQ9Y5L5 61 aa3.9□□□□□ -1.79
CD44-237ENST00000534082 IGLV10-54A0A075B6I4 117 aa3.89□□□□□ -1.79
CD44-237ENST00000534082 A0A096LNI7 61 aa3.89□□□□□ -1.79
CD44-237ENST00000534082 RBAKDNA6NC62 111 aa3.89□□□□□ -1.79
CD44-237ENST00000534082 CENPXA8MT69 81 aa3.89□□□□□ -1.79
CD44-237ENST00000534082 F6UZH7 168 aa3.89□□□□□ -1.79
CD44-237ENST00000534082 SSSCA1O60232 199 aa3.89□□□□□ -1.79
CD44-237ENST00000534082 ZNF25P17030 456 aaPredicted RBP3.89□□□□□ -1.79
CD44-237ENST00000534082 MIC13Q5XKP0 118 aa3.89□□□□□ -1.79
CD44-237ENST00000534082 LINC00299Q6ZSB3 139 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms