RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 DNLZQ5SXM8 178 aa6.42□□□□□ -1.38
SSBP3-215ENST00000533946 FAM162BQ5T6X4 162 aa6.42□□□□□ -1.38
SSBP3-215ENST00000533946 PRR27Q6MZM9 219 aa6.42□□□□□ -1.38
SSBP3-215ENST00000533946 ATP6V0E2Q8NHE4 81 aa6.42□□□□□ -1.38
SSBP3-215ENST00000533946 TXNDC17Q9BRA2 123 aa6.42□□□□□ -1.38
SSBP3-215ENST00000533946 TRBV20OR9-2A0A075B6H5 130 aa6.41□□□□□ -1.38
SSBP3-215ENST00000533946 IBA57-AS1B1ANH7 110 aa6.41□□□□□ -1.38
SSBP3-215ENST00000533946 H2AFB1P0C5Y9 115 aa6.41□□□□□ -1.38
SSBP3-215ENST00000533946 TIRAPP58753 221 aa6.41□□□□□ -1.38
SSBP3-215ENST00000533946 UBE2G1P62253 170 aa6.41□□□□□ -1.38
SSBP3-215ENST00000533946 LINC01620Q4KN68 170 aa6.41□□□□□ -1.38
SSBP3-215ENST00000533946 Q6ZNX1 250 aa6.41□□□□□ -1.38
SSBP3-215ENST00000533946 STOML3Q8TAV4 291 aa6.41□□□□□ -1.38
SSBP3-215ENST00000533946 DEFB104AQ8WTQ1 72 aa6.41□□□□□ -1.38
SSBP3-215ENST00000533946 SFRP2Q96HF1 295 aa6.41□□□□□ -1.38
SSBP3-215ENST00000533946 GTSF1LQ9H1H1 148 aa6.41□□□□□ -1.38
SSBP3-215ENST00000533946 FAM30AQ9NZY2 134 aa6.41□□□□□ -1.38
SSBP3-215ENST00000533946 GNG13Q9P2W3 67 aa6.41□□□□□ -1.38
SSBP3-215ENST00000533946 ZFP30Q9Y2G7 519 aa6.41□□□□□ -1.38
SSBP3-215ENST00000533946 PFDN1O60925 122 aa6.4□□□□□ -1.38
SSBP3-215ENST00000533946 SMR3BP02814 79 aaPredicted RBP6.4□□□□□ -1.38
SSBP3-215ENST00000533946 MGST1P10620 155 aaKnown RBP6.4□□□□□ -1.38
SSBP3-215ENST00000533946 EVI2AP22794 236 aa6.4□□□□□ -1.38
SSBP3-215ENST00000533946 RPL35P42766 123 aaKnown RBP6.4□□□□□ -1.38
SSBP3-215ENST00000533946 LINC01556Q5JQF7 62 aa6.4□□□□□ -1.38
SSBP3-215ENST00000533946 LELP1Q5T871 98 aa6.4□□□□□ -1.38
SSBP3-215ENST00000533946 BAGE2Q86Y30 109 aa6.4□□□□□ -1.38
SSBP3-215ENST00000533946 PRADC1Q9BSG0 188 aa6.4□□□□□ -1.38
SSBP3-215ENST00000533946 NKX6-2Q9C056 277 aaPredicted RBP6.4□□□□□ -1.38
SSBP3-215ENST00000533946 A8MWV9 139 aa6.39□□□□□ -1.39
SSBP3-215ENST00000533946 UMAD1C9J7I0 102 aa6.39□□□□□ -1.39
SSBP3-215ENST00000533946 ZFP2Q6ZN57 461 aa6.39□□□□□ -1.39
SSBP3-215ENST00000533946 Q8N1X5 172 aa6.39□□□□□ -1.39
SSBP3-215ENST00000533946 BOLA1Q9Y3E2 137 aa6.39□□□□□ -1.39
SSBP3-215ENST00000533946 PHLDA3Q9Y5J5 127 aa6.39□□□□□ -1.39
SSBP3-215ENST00000533946 KIF25-AS1Q9Y6Z4 181 aa6.39□□□□□ -1.39
SSBP3-215ENST00000533946 TPT1P13693 172 aaKnown RBP6.38□□□□□ -1.39
SSBP3-215ENST00000533946 SULT1A2P50226 295 aa6.38□□□□□ -1.39
SSBP3-215ENST00000533946 NKX2-5P52952 324 aaPredicted RBP6.38□□□□□ -1.39
SSBP3-215ENST00000533946 ERVFC1-1P60608 527 aa6.38□□□□□ -1.39
SSBP3-215ENST00000533946 CENPWQ5EE01 88 aa6.38□□□□□ -1.39
SSBP3-215ENST00000533946 TCTE3Q8IZS6 198 aa6.38□□□□□ -1.39
SSBP3-215ENST00000533946 C9orf62Q8N4C0 152 aa6.38□□□□□ -1.39
SSBP3-215ENST00000533946 NEXN-AS1Q8NBZ9 246 aa6.38□□□□□ -1.39
SSBP3-215ENST00000533946 SSBP4Q9BWG4 385 aaPredicted RBP6.38□□□□□ -1.39
SSBP3-215ENST00000533946 LRP1Q07954 4544 aaKnown RBP6.38□□□□□ -1.39
SSBP3-215ENST00000533946 FLG2Q5D862 2391 aaPredicted RBP6.37□□□□□ -1.39
SSBP3-215ENST00000533946 TRAV9-2A0A087WT02 112 aa6.37□□□□□ -1.39
SSBP3-215ENST00000533946 TRAV8-6A0A0B4J262 113 aa6.37□□□□□ -1.39
SSBP3-215ENST00000533946 UBE2D3P61077 147 aa6.37□□□□□ -1.39
SSBP3-215ENST00000533946 UBE2D2P62837 147 aa6.37□□□□□ -1.39
SSBP3-215ENST00000533946 NTM-AS1Q6ZSK4 140 aa6.37□□□□□ -1.39
SSBP3-215ENST00000533946 BAALCQ8WXS3 180 aa6.37□□□□□ -1.39
SSBP3-215ENST00000533946 C11orf52Q96A22 123 aa6.37□□□□□ -1.39
SSBP3-215ENST00000533946 TRAV1-1A0A0B4J248 108 aa6.36□□□□□ -1.39
SSBP3-215ENST00000533946 C19orf71A6NCJ1 209 aa6.36□□□□□ -1.39
SSBP3-215ENST00000533946 SNAI2O43623 268 aa6.36□□□□□ -1.39
SSBP3-215ENST00000533946 PIK3CD-AS1Q5SR53 167 aa6.36□□□□□ -1.39
SSBP3-215ENST00000533946 NIT1Q86X76 327 aa6.36□□□□□ -1.39
SSBP3-215ENST00000533946 NTN5Q8WTR8 489 aaPredicted RBP6.36□□□□□ -1.39
SSBP3-215ENST00000533946 PGPEP1Q9NXJ5 209 aa6.36□□□□□ -1.39
SSBP3-215ENST00000533946 K7EN84 100 aa6.35□□□□□ -1.39
SSBP3-215ENST00000533946 IGLC6P0CF74 106 aa6.35□□□□□ -1.39
SSBP3-215ENST00000533946 FOXA3P55318 350 aaPredicted RBP6.35□□□□□ -1.39
SSBP3-215ENST00000533946 SH2D6Q7Z4S9 175 aa6.35□□□□□ -1.39
SSBP3-215ENST00000533946 NFE4Q86UQ8 179 aa6.35□□□□□ -1.39
SSBP3-215ENST00000533946 ZFP82Q8N141 532 aa6.35□□□□□ -1.39
SSBP3-215ENST00000533946 Q8N814 137 aa6.35□□□□□ -1.39
SSBP3-215ENST00000533946 SYT8Q8NBV8 401 aa6.35□□□□□ -1.39
SSBP3-215ENST00000533946 KLK12Q9UKR0 248 aa6.35□□□□□ -1.39
SSBP3-215ENST00000533946 FAT3Q8TDW7 4589 aa6.34□□□□□ -1.39
SSBP3-215ENST00000533946 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.34□□□□□ -1.39
SSBP3-215ENST00000533946 CIDEAO60543 219 aa6.34□□□□□ -1.39
SSBP3-215ENST00000533946 GCSHP23434 173 aa6.34□□□□□ -1.39
SSBP3-215ENST00000533946 ZNF56Q15929 161 aa6.34□□□□□ -1.39
SSBP3-215ENST00000533946 ALKAL2Q6UX46 152 aa6.34□□□□□ -1.39
SSBP3-215ENST00000533946 Q8N976 141 aa6.34□□□□□ -1.39
SSBP3-215ENST00000533946 TCEAL7Q9BRU2 100 aa6.34□□□□□ -1.39
SSBP3-215ENST00000533946 TPPP3Q9BW30 176 aa6.34□□□□□ -1.39
SSBP3-215ENST00000533946 PKHD1L1Q86WI1 4243 aa6.33□□□□□ -1.4
SSBP3-215ENST00000533946 IGLV5-52A0A0A0MRZ9 124 aa6.33□□□□□ -1.4
SSBP3-215ENST00000533946 TEX46H3BTG2 121 aa6.33□□□□□ -1.4
SSBP3-215ENST00000533946 RHODO00212 210 aa6.33□□□□□ -1.4
SSBP3-215ENST00000533946 PSCAO43653 123 aa6.33□□□□□ -1.4
SSBP3-215ENST00000533946 OR5AL1P0C617 328 aa6.33□□□□□ -1.4
SSBP3-215ENST00000533946 BCL2P10415 239 aa6.33□□□□□ -1.4
SSBP3-215ENST00000533946 MEF2BQ02080 365 aaPredicted RBP6.33□□□□□ -1.4
SSBP3-215ENST00000533946 MPV17L2Q567V2 206 aa6.33□□□□□ -1.4
SSBP3-215ENST00000533946 LYZL1Q6UWQ5 148 aa6.33□□□□□ -1.4
SSBP3-215ENST00000533946 ENHOQ6UWT2 76 aa6.33□□□□□ -1.4
SSBP3-215ENST00000533946 C10orf126Q8N4M7 172 aa6.33□□□□□ -1.4
SSBP3-215ENST00000533946 NUDT10Q8NFP7 164 aa6.33□□□□□ -1.4
SSBP3-215ENST00000533946 OR2D3Q8NGH3 330 aa6.33□□□□□ -1.4
SSBP3-215ENST00000533946 OCC1Q8TAD7 63 aa6.33□□□□□ -1.4
SSBP3-215ENST00000533946 NUDT11Q96G61 164 aa6.33□□□□□ -1.4
SSBP3-215ENST00000533946 RNASE7Q9H1E1 156 aaKnown RBP6.33□□□□□ -1.4
SSBP3-215ENST00000533946 MANBALQ9NQG1 85 aa6.33□□□□□ -1.4
SSBP3-215ENST00000533946 MED9Q9NWA0 146 aa6.33□□□□□ -1.4
SSBP3-215ENST00000533946 TRBV7-3A0A075B6L6 115 aa6.32□□□□□ -1.4
SSBP3-215ENST00000533946 F5H697 171 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms