RNA–Protein interactions for RNA: ENST00000533789.5

HIF3A-216, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-216ENST00000533789 SMLR1H3BR10 107 aa12.27□□□□□ -0.45
HIF3A-216ENST00000533789 TPT1P13693 172 aaKnown RBP12.27□□□□□ -0.45
HIF3A-216ENST00000533789 FAM74A4Q5TZK3 123 aa12.27□□□□□ -0.45
HIF3A-216ENST00000533789 SFRP2Q96HF1 295 aa12.27□□□□□ -0.45
HIF3A-216ENST00000533789 TMEM70Q9BUB7 260 aa12.27□□□□□ -0.45
HIF3A-216ENST00000533789 TM2D2Q9BX73 214 aa12.27□□□□□ -0.45
HIF3A-216ENST00000533789 PHLDA3Q9Y5J5 127 aa12.27□□□□□ -0.45
HIF3A-216ENST00000533789 DMBT1Q9UGM3 2413 aaPredicted RBP12.27□□□□□ -0.45
HIF3A-216ENST00000533789 KCNRGQ8N5I3 272 aa12.26□□□□□ -0.45
HIF3A-216ENST00000533789 TMSB15BA0A087X1C1 80 aa12.25□□□□□ -0.45
HIF3A-216ENST00000533789 TRAV8-3A0A0A6YYJ7 113 aa12.25□□□□□ -0.45
HIF3A-216ENST00000533789 M0R381 172 aa12.25□□□□□ -0.45
HIF3A-216ENST00000533789 PAGE4O60829 102 aa12.25□□□□□ -0.45
HIF3A-216ENST00000533789 SEC11BP0C7V7 166 aa12.25□□□□□ -0.45
HIF3A-216ENST00000533789 TOR2AQ5JU69 321 aa12.25□□□□□ -0.45
HIF3A-216ENST00000533789 ZFP82Q8N141 532 aa12.25□□□□□ -0.45
HIF3A-216ENST00000533789 VPS13BQ7Z7G8 4022 aa12.25□□□□□ -0.45
HIF3A-216ENST00000533789 A0A087WWL8 130 aa12.24□□□□□ -0.45
HIF3A-216ENST00000533789 DAZ4Q86SG3 579 aaKnown RBP12.24□□□□□ -0.45
HIF3A-216ENST00000533789 DAZ3Q9NR90 486 aaKnown RBP12.24□□□□□ -0.45
HIF3A-216ENST00000533789 SRRM2Q9UQ35 2752 aaKnown RBP12.24□□□□□ -0.45
HIF3A-216ENST00000533789 FLG2Q5D862 2391 aaPredicted RBP12.23□□□□□ -0.45
HIF3A-216ENST00000533789 UMAD1C9J7I0 102 aa12.23□□□□□ -0.45
HIF3A-216ENST00000533789 INAFM2P0DMQ5 153 aa12.23□□□□□ -0.45
HIF3A-216ENST00000533789 FAM213BQ8TBF2 198 aa12.23□□□□□ -0.45
HIF3A-216ENST00000533789 SFT2D1Q8WV19 159 aa12.23□□□□□ -0.45
HIF3A-216ENST00000533789 MBD3L1Q8WWY6 194 aa12.23□□□□□ -0.45
HIF3A-216ENST00000533789 SMR3BP02814 79 aaPredicted RBP12.22□□□□□ -0.45
HIF3A-216ENST00000533789 S100A9P06702 114 aaKnown RBP12.22□□□□□ -0.45
HIF3A-216ENST00000533789 HAMPP81172 84 aa12.22□□□□□ -0.45
HIF3A-216ENST00000533789 WFDC2Q14508 124 aa12.22□□□□□ -0.45
HIF3A-216ENST00000533789 TRBV10-1A0A0K0K1A3 114 aa12.21□□□□□ -0.45
HIF3A-216ENST00000533789 SCO2A0A1W2PP80 73 aa12.21□□□□□ -0.45
HIF3A-216ENST00000533789 HMSDA8MTL9 139 aa12.21□□□□□ -0.45
HIF3A-216ENST00000533789 NIT1Q86X76 327 aa12.21□□□□□ -0.45
HIF3A-216ENST00000533789 URGCP-MRPS24S4R325 110 aa12.21□□□□□ -0.45
HIF3A-216ENST00000533789 A0A0D9SG52 128 aa12.2□□□□□ -0.46
HIF3A-216ENST00000533789 A0A1B0GV50 99 aa12.2□□□□□ -0.46
HIF3A-216ENST00000533789 BCL2L11O43521 198 aa12.2□□□□□ -0.46
HIF3A-216ENST00000533789 PFDN1O60925 122 aa12.2□□□□□ -0.46
HIF3A-216ENST00000533789 C1QBP02746 253 aa12.2□□□□□ -0.46
HIF3A-216ENST00000533789 CXCL1P09341 107 aa12.2□□□□□ -0.46
HIF3A-216ENST00000533789 ZNF471Q9BX82 626 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-216ENST00000533789 COX11Q9Y6N1 276 aa12.2□□□□□ -0.46
HIF3A-216ENST00000533789 KANTRA0A1W2PQU2 76 aa12.19□□□□□ -0.46
HIF3A-216ENST00000533789 RPL36AP83881 106 aaKnown RBP12.19□□□□□ -0.46
HIF3A-216ENST00000533789 RPL19P84098 196 aaKnown RBP12.19□□□□□ -0.46
HIF3A-216ENST00000533789 RPL36ALQ969Q0 106 aaKnown RBP12.19□□□□□ -0.46
HIF3A-216ENST00000533789 RMI2Q96E14 147 aa12.19□□□□□ -0.46
HIF3A-216ENST00000533789 CHCHD7Q9BUK0 85 aa12.19□□□□□ -0.46
HIF3A-216ENST00000533789 MLST8Q9BVC4 326 aa12.19□□□□□ -0.46
HIF3A-216ENST00000533789 TRBV7-3A0A075B6L6 115 aa12.18□□□□□ -0.46
HIF3A-216ENST00000533789 UBE2D3P61077 147 aa12.18□□□□□ -0.46
HIF3A-216ENST00000533789 UBE2D2P62837 147 aa12.18□□□□□ -0.46
HIF3A-216ENST00000533789 OR10AG1Q8NH19 301 aa12.18□□□□□ -0.46
HIF3A-216ENST00000533789 DNAH8Q96JB1 4490 aa12.18□□□□□ -0.46
HIF3A-216ENST00000533789 HERC1Q15751 4861 aa12.17□□□□□ -0.46
HIF3A-216ENST00000533789 FAM229AH3BQW9 127 aa12.17□□□□□ -0.46
HIF3A-216ENST00000533789 LECT2O14960 151 aa12.17□□□□□ -0.46
HIF3A-216ENST00000533789 H2AFB1P0C5Y9 115 aa12.17□□□□□ -0.46
HIF3A-216ENST00000533789 EIF5AP63241 154 aaKnown RBP12.17□□□□□ -0.46
HIF3A-216ENST00000533789 BAGE2Q86Y30 109 aa12.17□□□□□ -0.46
HIF3A-216ENST00000533789 OR10G8Q8NGN5 311 aa12.17□□□□□ -0.46
HIF3A-216ENST00000533789 FAM30AQ9NZY2 134 aa12.17□□□□□ -0.46
HIF3A-216ENST00000533789 MYCBP2O75592 4640 aa12.16□□□□□ -0.46
HIF3A-216ENST00000533789 SNAI2O43623 268 aa12.16□□□□□ -0.46
HIF3A-216ENST00000533789 RAB4BP61018 213 aa12.16□□□□□ -0.46
HIF3A-216ENST00000533789 ZNF56Q15929 161 aa12.16□□□□□ -0.46
HIF3A-216ENST00000533789 KLK12Q9UKR0 248 aa12.16□□□□□ -0.46
HIF3A-216ENST00000533789 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.15□□□□□ -0.46
HIF3A-216ENST00000533789 A0A087WX48 190 aa12.15□□□□□ -0.46
HIF3A-216ENST00000533789 OR5AL1P0C617 328 aa12.15□□□□□ -0.46
HIF3A-216ENST00000533789 KCNIP4Q6PIL6 250 aa12.15□□□□□ -0.46
HIF3A-216ENST00000533789 Q6ZSA8 131 aa12.15□□□□□ -0.46
HIF3A-216ENST00000533789 BAALCQ8WXS3 180 aa12.15□□□□□ -0.46
HIF3A-216ENST00000533789 SSBP4Q9BWG4 385 aaPredicted RBP12.15□□□□□ -0.46
HIF3A-216ENST00000533789 IGKV2D-24A0A075B6R9 120 aa12.14□□□□□ -0.47
HIF3A-216ENST00000533789 ELOBQ15370 118 aa12.14□□□□□ -0.47
HIF3A-216ENST00000533789 PRR27Q6MZM9 219 aa12.14□□□□□ -0.47
HIF3A-216ENST00000533789 NEXN-AS1Q8NBZ9 246 aa12.14□□□□□ -0.47
HIF3A-216ENST00000533789 DNAJC30Q96LL9 226 aa12.14□□□□□ -0.47
HIF3A-216ENST00000533789 ATRAIDQ6UW56 229 aa12.13□□□□□ -0.47
HIF3A-216ENST00000533789 TMUB2Q71RG4 321 aa12.13□□□□□ -0.47
HIF3A-216ENST00000533789 UBE2WQ96B02 151 aa12.13□□□□□ -0.47
HIF3A-216ENST00000533789 MANBALQ9NQG1 85 aa12.13□□□□□ -0.47
HIF3A-216ENST00000533789 TRBV6-8A0A0A6YYG3 113 aa12.12□□□□□ -0.47
HIF3A-216ENST00000533789 RPL35P42766 123 aaKnown RBP12.12□□□□□ -0.47
HIF3A-216ENST00000533789 SPANXN1Q5VSR9 72 aa12.12□□□□□ -0.47
HIF3A-216ENST00000533789 Q8N976 141 aa12.12□□□□□ -0.47
HIF3A-216ENST00000533789 C11orf52Q96A22 123 aa12.12□□□□□ -0.47
HIF3A-216ENST00000533789 Q0VG73 95 aa12.11□□□□□ -0.47
HIF3A-216ENST00000533789 DERL1Q9BUN8 251 aa12.11□□□□□ -0.47
HIF3A-216ENST00000533789 MUC21A0A0G2JKD1 596 aa12.1□□□□□ -0.47
HIF3A-216ENST00000533789 MUC21A0A140T8X8 626 aa12.1□□□□□ -0.47
HIF3A-216ENST00000533789 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.1□□□□□ -0.47
HIF3A-216ENST00000533789 GNG13Q9P2W3 67 aa12.1□□□□□ -0.47
HIF3A-216ENST00000533789 TRAV1-1A0A0B4J248 108 aa12.09□□□□□ -0.47
HIF3A-216ENST00000533789 RBFOX3A6NFN3 312 aa12.09□□□□□ -0.47
HIF3A-216ENST00000533789 F5H697 171 aa12.09□□□□□ -0.47
HIF3A-216ENST00000533789 CCL20P78556 96 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms