RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 DNAJB13P59910 316 aa-0.31□□□□□ -2.46
ATM-220ENST00000533526 OR8B8Q15620 311 aa-0.31□□□□□ -2.46
ATM-220ENST00000533526 KRTAP6-2Q3LI66 62 aa-0.31□□□□□ -2.46
ATM-220ENST00000533526 TMEM244Q5VVB8 128 aa-0.31□□□□□ -2.46
ATM-220ENST00000533526 MNS1Q8NEH6 495 aa-0.31□□□□□ -2.46
ATM-220ENST00000533526 CHMP6Q96FZ7 201 aa-0.31□□□□□ -2.46
ATM-220ENST00000533526 PRELID3AQ96N28 172 aa-0.31□□□□□ -2.46
ATM-220ENST00000533526 PCBD2Q9H0N5 130 aa-0.31□□□□□ -2.46
ATM-220ENST00000533526 BOLA2Q9H3K6 86 aa-0.31□□□□□ -2.46
ATM-220ENST00000533526 MED11Q9P086 117 aa-0.31□□□□□ -2.46
ATM-220ENST00000533526 STOML2Q9UJZ1 356 aa-0.31□□□□□ -2.46
ATM-220ENST00000533526 MPC1Q9Y5U8 109 aa-0.31□□□□□ -2.46
ATM-220ENST00000533526 NUBP2Q9Y5Y2 271 aa-0.31□□□□□ -2.46
ATM-220ENST00000533526 A2MP01023 1474 aa-0.31□□□□□ -2.46
ATM-220ENST00000533526 TCHHQ07283 1943 aa-0.31□□□□□ -2.46
ATM-220ENST00000533526 CUL7Q14999 1698 aa-0.31□□□□□ -2.46
ATM-220ENST00000533526 DNAH9Q9NYC9 4486 aa-0.31□□□□□ -2.46
ATM-220ENST00000533526 AKAP9Q99996 3911 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 PIEZO2Q9H5I5 2752 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 FMN2Q9NZ56 1722 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 UNC13AQ9UPW8 1703 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 COL4A6Q14031 1691 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 PKHD1L1Q86WI1 4243 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 TRGV1A0A0A0MS02 117 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 TRAV17A0A0B4J275 112 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 TMEM30CPA0ZSE6 113 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 HIGD1CA8MV81 97 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 H3BMG7 143 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 I3L2K1 104 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 CCKP06307 115 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 SAA1P0DJI8 122 aaPredicted RBP-0.32□□□□□ -2.46
ATM-220ENST00000533526 RPL22P35268 128 aaKnown RBP-0.32□□□□□ -2.46
ATM-220ENST00000533526 MRPS15P82914 257 aaKnown RBP-0.32□□□□□ -2.46
ATM-220ENST00000533526 KLKP1Q107X0 134 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 C9orf116Q5BN46 136 aaPredicted RBP-0.32□□□□□ -2.46
ATM-220ENST00000533526 MIC13Q5XKP0 118 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 C3orf33Q6P1S2 294 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 TMEM91Q6ZNR0 172 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 SLC25A26Q70HW3 274 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 TMED4Q7Z7H5 227 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 FAM24BQ8N5W8 94 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 TMEM229BQ8NBD8 167 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 OR4S1Q8NGB4 309 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 DYDC1Q8WWB3 177 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 C19orf12Q9NSK7 152 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 TMEM14BQ9NUH8 114 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 U3KQA8 63 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 NHSL1Q5SYE7 1610 aa-0.32□□□□□ -2.46
ATM-220ENST00000533526 PRG4Q92954 1404 aaPredicted RBP-0.32□□□□□ -2.46
ATM-220ENST00000533526 IBTKQ9P2D0 1353 aaPredicted RBP-0.32□□□□□ -2.46
ATM-220ENST00000533526 CHD1O14646 1710 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 FLNAP21333 2647 aaKnown RBP-0.33□□□□□ -2.46
ATM-220ENST00000533526 HYDINQ4G0P3 5121 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 CDK13Q14004 1512 aaKnown RBP-0.33□□□□□ -2.46
ATM-220ENST00000533526 REV3LO60673 3130 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 RIMS1Q86UR5 1692 aaKnown RBP-0.33□□□□□ -2.46
ATM-220ENST00000533526 BCL9LQ86UU0 1499 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 RNF213Q63HN8 5207 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 CC2D2AQ9P2K1 1620 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 TRAV36DV7A0A075B6V5 113 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 ZNF815PA8K554 130 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 C10orf142B7Z368 130 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 C9JAW5 83 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 E7EQ34 232 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 PGRMC1O00264 195 aaKnown RBP-0.33□□□□□ -2.46
ATM-220ENST00000533526 ARPC5O15511 151 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 TPST1O60507 370 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 TNFSF15O95150 251 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 OR2H2O95918 312 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 LINC00694P0DN24 101 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 TPT1P13693 172 aaKnown RBP-0.33□□□□□ -2.46
ATM-220ENST00000533526 AKR1D1P51857 326 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 GTF2A1P52655 376 aaPredicted RBP-0.33□□□□□ -2.46
ATM-220ENST00000533526 B2MP61769 119 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 RHOHQ15669 191 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 HSD17B12Q53GQ0 312 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 LINC01545Q5VT33 79 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 SSBP3-AS1Q7Z2R9 100 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 C20orf197Q8N268 126 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 AGPAT4-IT1Q9H0P7 198 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 LINC00472Q9H8W2 130 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 METTL1Q9UBP6 276 aaKnown RBP-0.33□□□□□ -2.46
ATM-220ENST00000533526 HIGD1AQ9Y241 93 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 CASKIN1Q8WXD9 1431 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 YTHDC2Q9H6S0 1430 aaKnown RBP-0.33□□□□□ -2.46
ATM-220ENST00000533526 NUP188Q5SRE5 1749 aa-0.33□□□□□ -2.46
ATM-220ENST00000533526 SETXQ7Z333 2677 aaKnown RBP-0.34□□□□□ -2.46
ATM-220ENST00000533526 IGHV1-24A0A0C4DH33 117 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 TRBV10-1A0A0K0K1A3 114 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 LOC105371267A0A1B0GV96 52 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 TMEM189A5PLL7 270 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 MCRIP1C9JLW8 97 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 BCE1O60756 84 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 RYR1P21817 5038 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 UBE2D1P51668 147 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 PCBD1P61457 104 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 TFAMQ00059 246 aaKnown RBP-0.34□□□□□ -2.46
ATM-220ENST00000533526 TMEM128Q5BJH2 165 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 CLLU1Q5K131 121 aa-0.34□□□□□ -2.46
ATM-220ENST00000533526 Q6ZRX8 168 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms