RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 IGHV4-39P01824 125 aa12.42□□□□□ -0.42
CTSB-228ENST00000533455 ZNF876PQ49A33 203 aa12.42□□□□□ -0.42
CTSB-228ENST00000533455 IGKV3-7A0A075B6H7 116 aa12.41□□□□□ -0.42
CTSB-228ENST00000533455 SDHAF1A6NFY7 115 aa12.41□□□□□ -0.42
CTSB-228ENST00000533455 K7EMT4 169 aa12.41□□□□□ -0.42
CTSB-228ENST00000533455 IGHV3-30P01768 117 aa12.41□□□□□ -0.42
CTSB-228ENST00000533455 IGHV3-30-5P0DP03 117 aa12.41□□□□□ -0.42
CTSB-228ENST00000533455 ID1P41134 155 aa12.41□□□□□ -0.42
CTSB-228ENST00000533455 TSPEAR-AS2P59090 65 aa12.41□□□□□ -0.42
CTSB-228ENST00000533455 RPL39P62891 51 aaKnown RBP12.41□□□□□ -0.42
CTSB-228ENST00000533455 SLC25A29Q8N8R3 303 aa12.41□□□□□ -0.42
CTSB-228ENST00000533455 LY6EQ16553 131 aa12.4□□□□□ -0.42
CTSB-228ENST00000533455 ODF3Q96PU9 254 aa12.4□□□□□ -0.42
CTSB-228ENST00000533455 NBASA2RRP1 2371 aa12.4□□□□□ -0.42
CTSB-228ENST00000533455 PSMB2P49721 201 aa12.4□□□□□ -0.42
CTSB-228ENST00000533455 EMP1P54849 157 aa12.4□□□□□ -0.42
CTSB-228ENST00000533455 DCANP1Q8TF63 244 aa12.4□□□□□ -0.42
CTSB-228ENST00000533455 C9orf85Q96MD7 179 aa12.4□□□□□ -0.42
CTSB-228ENST00000533455 AMELXQ99217 191 aa12.4□□□□□ -0.42
CTSB-228ENST00000533455 A0A087WWL8 130 aa12.39□□□□□ -0.43
CTSB-228ENST00000533455 LOC107984156A0A0G2JMH3 177 aa12.39□□□□□ -0.43
CTSB-228ENST00000533455 H3BUX3 64 aa12.39□□□□□ -0.43
CTSB-228ENST00000533455 NFE4Q86UQ8 179 aa12.39□□□□□ -0.43
CTSB-228ENST00000533455 ARL17AQ8IVW1 177 aa12.39□□□□□ -0.43
CTSB-228ENST00000533455 ZNRF2Q8NHG8 242 aa12.39□□□□□ -0.43
CTSB-228ENST00000533455 F5H697 171 aa12.38□□□□□ -0.43
CTSB-228ENST00000533455 IGHV4-38-2P0DP08 117 aa12.38□□□□□ -0.43
CTSB-228ENST00000533455 CFHR3Q02985 330 aa12.38□□□□□ -0.43
CTSB-228ENST00000533455 CLEC2AQ6UVW9 174 aa12.38□□□□□ -0.43
CTSB-228ENST00000533455 Q6ZS46 218 aa12.38□□□□□ -0.43
CTSB-228ENST00000533455 TRBV20-1A0A075B6N2 111 aa12.38□□□□□ -0.43
CTSB-228ENST00000533455 IGHV3-16A0A0C4DH30 117 aa12.38□□□□□ -0.43
CTSB-228ENST00000533455 CFC1BP0CG36 223 aa12.38□□□□□ -0.43
CTSB-228ENST00000533455 CFC1P0CG37 223 aa12.38□□□□□ -0.43
CTSB-228ENST00000533455 RHOHQ15669 191 aa12.38□□□□□ -0.43
CTSB-228ENST00000533455 NSUN5P1Q3KNT7 163 aa12.38□□□□□ -0.43
CTSB-228ENST00000533455 TMEM170BQ5T4T1 132 aa12.38□□□□□ -0.43
CTSB-228ENST00000533455 SBSPONQ8IVN8 264 aa12.38□□□□□ -0.43
CTSB-228ENST00000533455 SPTBN1Q01082 2364 aaKnown RBP12.38□□□□□ -0.43
CTSB-228ENST00000533455 TRAV12-3A0A0B4J271 114 aa12.37□□□□□ -0.43
CTSB-228ENST00000533455 SRD5A1P18405 259 aa12.37□□□□□ -0.43
CTSB-228ENST00000533455 C10orf126Q8N4M7 172 aa12.37□□□□□ -0.43
CTSB-228ENST00000533455 IGHV4-61A0A0C4DH41 118 aa12.37□□□□□ -0.43
CTSB-228ENST00000533455 A0A1B0GV72 72 aa12.37□□□□□ -0.43
CTSB-228ENST00000533455 J3QQQ9 107 aa12.37□□□□□ -0.43
CTSB-228ENST00000533455 BLCAPP62952 87 aa12.37□□□□□ -0.43
CTSB-228ENST00000533455 TCTEX1D4Q5JR98 221 aa12.37□□□□□ -0.43
CTSB-228ENST00000533455 PIMREGQ9BSJ6 248 aa12.37□□□□□ -0.43
CTSB-228ENST00000533455 HIVEP3Q5T1R4 2406 aa12.36□□□□□ -0.43
CTSB-228ENST00000533455 CACNA1AO00555 2505 aa12.36□□□□□ -0.43
CTSB-228ENST00000533455 EDN2P20800 178 aa12.36□□□□□ -0.43
CTSB-228ENST00000533455 SYT8Q8NBV8 401 aa12.36□□□□□ -0.43
CTSB-228ENST00000533455 CDIP1Q9H305 208 aa12.36□□□□□ -0.43
CTSB-228ENST00000533455 ZNF580Q9UK33 172 aa12.36□□□□□ -0.43
CTSB-228ENST00000533455 C19orf84I3L1E1 186 aa12.35□□□□□ -0.43
CTSB-228ENST00000533455 M0QY20 66 aa12.35□□□□□ -0.43
CTSB-228ENST00000533455 TCL1BO95988 128 aa12.35□□□□□ -0.43
CTSB-228ENST00000533455 PPDPFLQ8WWR9 84 aa12.35□□□□□ -0.43
CTSB-228ENST00000533455 LEPROTO15243 131 aa12.35□□□□□ -0.43
CTSB-228ENST00000533455 LGALS3P17931 250 aaKnown RBP12.35□□□□□ -0.43
CTSB-228ENST00000533455 TEN1Q86WV5 123 aa12.35□□□□□ -0.43
CTSB-228ENST00000533455 TMEM223A0PJW6 202 aa12.34□□□□□ -0.43
CTSB-228ENST00000533455 SFTA2Q6UW10 78 aa12.34□□□□□ -0.43
CTSB-228ENST00000533455 ZNF418Q8TF45 676 aaPredicted RBP12.34□□□□□ -0.43
CTSB-228ENST00000533455 DEFB104AQ8WTQ1 72 aa12.34□□□□□ -0.43
CTSB-228ENST00000533455 PRO1854Q9UHT4 67 aa12.34□□□□□ -0.43
CTSB-228ENST00000533455 TRPT1Q86TN4 253 aaKnown RBP12.33□□□□□ -0.43
CTSB-228ENST00000533455 ZNF256Q9Y2P7 627 aaPredicted RBP12.33□□□□□ -0.43
CTSB-228ENST00000533455 FAM74A4Q5TZK3 123 aa12.33□□□□□ -0.44
CTSB-228ENST00000533455 C10orf105Q8TEF2 133 aa12.33□□□□□ -0.44
CTSB-228ENST00000533455 WFDC12Q8WWY7 111 aa12.33□□□□□ -0.44
CTSB-228ENST00000533455 CARD19Q96LW7 228 aa12.33□□□□□ -0.44
CTSB-228ENST00000533455 VCX2Q9H322 139 aa12.33□□□□□ -0.44
CTSB-228ENST00000533455 COL6A6A6NMZ7 2263 aa12.32□□□□□ -0.44
CTSB-228ENST00000533455 A0A0J9YX75 114 aa12.32□□□□□ -0.44
CTSB-228ENST00000533455 LY6DQ14210 128 aa12.32□□□□□ -0.44
CTSB-228ENST00000533455 ZNF56Q15929 161 aa12.32□□□□□ -0.44
CTSB-228ENST00000533455 MDFICQ9P1T7 246 aa12.32□□□□□ -0.44
CTSB-228ENST00000533455 SVEP1Q4LDE5 3571 aa12.32□□□□□ -0.44
CTSB-228ENST00000533455 P0DMU3 169 aa12.32□□□□□ -0.44
CTSB-228ENST00000533455 FAM231AP0DMU4 169 aa12.32□□□□□ -0.44
CTSB-228ENST00000533455 FAM231CP0DMU5 169 aa12.32□□□□□ -0.44
CTSB-228ENST00000533455 C20orf203Q8NBC4 194 aa12.32□□□□□ -0.44
CTSB-228ENST00000533455 PTH2Q96A98 100 aa12.32□□□□□ -0.44
CTSB-228ENST00000533455 ASH1LQ9NR48 2969 aaKnown RBP12.31□□□□□ -0.44
CTSB-228ENST00000533455 A8MWV9 139 aa12.31□□□□□ -0.44
CTSB-228ENST00000533455 CRYBA4P53673 196 aa12.31□□□□□ -0.44
CTSB-228ENST00000533455 FHL3Q13643 280 aa12.31□□□□□ -0.44
CTSB-228ENST00000533455 Q8N1Y9 231 aa12.31□□□□□ -0.44
CTSB-228ENST00000533455 PKD1L2Q7Z442 2459 aa12.31□□□□□ -0.44
CTSB-228ENST00000533455 IGHV1OR15-1A0A075B7D0 117 aa12.3□□□□□ -0.44
CTSB-228ENST00000533455 ZNF22P17026 224 aaPredicted RBP12.3□□□□□ -0.44
CTSB-228ENST00000533455 A0A0B4J2C4 111 aa12.3□□□□□ -0.44
CTSB-228ENST00000533455 M0QXV9 152 aa12.3□□□□□ -0.44
CTSB-228ENST00000533455 ZNF688P0C7X2 276 aa12.3□□□□□ -0.44
CTSB-228ENST00000533455 PSMB8P28062 276 aa12.3□□□□□ -0.44
CTSB-228ENST00000533455 K7EQG2 157 aa12.29□□□□□ -0.44
CTSB-228ENST00000533455 RHODO00212 210 aa12.29□□□□□ -0.44
CTSB-228ENST00000533455 OPRPNQ99935 248 aaPredicted RBP12.29□□□□□ -0.44
CTSB-228ENST00000533455 TRAV12-2A0A075B6T6 113 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms