RNA–Protein interactions for RNA: ENST00000533333.5

PAX6-228, Transcript of paired box 6, humanhuman

TSL 2

Gene PAX6, Length 6,173 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-228ENST00000533333 TP53BP1Q12888 1972 aaPredicted RBP13.65□□□□□ -0.22
PAX6-228ENST00000533333 ATRXP46100 2492 aa13.65□□□□□ -0.22
PAX6-228ENST00000533333 GBF1Q92538 1859 aa13.65□□□□□ -0.22
PAX6-228ENST00000533333 PRO0255Q9UI72 69 aa13.65□□□□□ -0.22
PAX6-228ENST00000533333 PDE6GP18545 87 aa13.65□□□□□ -0.22
PAX6-228ENST00000533333 PROK2Q9HC23 129 aa13.64□□□□□ -0.23
PAX6-228ENST00000533333 UBE2D4Q9Y2X8 147 aa13.64□□□□□ -0.23
PAX6-228ENST00000533333 IGKV1D-37A0A075B6S9 117 aa13.64□□□□□ -0.23
PAX6-228ENST00000533333 FOXI1Q12951 378 aa13.64□□□□□ -0.23
PAX6-228ENST00000533333 TRAV23DV6A0A075B6W5 121 aa13.63□□□□□ -0.23
PAX6-228ENST00000533333 C7orf33Q8WU49 177 aa13.63□□□□□ -0.23
PAX6-228ENST00000533333 LOC285556D6RIA3 1793 aa13.63□□□□□ -0.23
PAX6-228ENST00000533333 TRAV26-1A0A087WT03 109 aa13.63□□□□□ -0.23
PAX6-228ENST00000533333 MRPL55Q7Z7F7 128 aaKnown RBP13.63□□□□□ -0.23
PAX6-228ENST00000533333 LYPD6BQ8NI32 183 aa13.63□□□□□ -0.23
PAX6-228ENST00000533333 WFDC10BQ8IUB3 73 aa13.62□□□□□ -0.23
PAX6-228ENST00000533333 C5orf56Q8N8D9 126 aa13.62□□□□□ -0.23
PAX6-228ENST00000533333 BRCA1P38398 1863 aaKnown RBP13.62□□□□□ -0.23
PAX6-228ENST00000533333 CRYGDP07320 174 aa13.62□□□□□ -0.23
PAX6-228ENST00000533333 C10orf105Q8TEF2 133 aa13.62□□□□□ -0.23
PAX6-228ENST00000533333 MLST8Q9BVC4 326 aa13.62□□□□□ -0.23
PAX6-228ENST00000533333 Q8N9W7 124 aa13.62□□□□□ -0.23
PAX6-228ENST00000533333 I3L2K1 104 aa13.62□□□□□ -0.23
PAX6-228ENST00000533333 TEN1Q86WV5 123 aa13.62□□□□□ -0.23
PAX6-228ENST00000533333 A0A0J9YWU9 116 aa13.61□□□□□ -0.23
PAX6-228ENST00000533333 IGLV11-55A0A075B6I3 123 aa13.61□□□□□ -0.23
PAX6-228ENST00000533333 TEX49A0A1B0GTD5 131 aa13.61□□□□□ -0.23
PAX6-228ENST00000533333 TMEM263Q8WUH6 116 aaKnown RBP13.61□□□□□ -0.23
PAX6-228ENST00000533333 TOMM6Q96B49 74 aa13.6□□□□□ -0.23
PAX6-228ENST00000533333 RITA1Q96K30 269 aa13.6□□□□□ -0.23
PAX6-228ENST00000533333 INSL3P51460 131 aa13.6□□□□□ -0.23
PAX6-228ENST00000533333 HILS1P60008 231 aa13.6□□□□□ -0.23
PAX6-228ENST00000533333 UFSP1Q6NVU6 142 aa13.59□□□□□ -0.23
PAX6-228ENST00000533333 SCN5AQ14524 2016 aa13.59□□□□□ -0.23
PAX6-228ENST00000533333 NYNRINQ9P2P1 1898 aaKnown RBP13.59□□□□□ -0.23
PAX6-228ENST00000533333 ACACAQ13085 2346 aa13.59□□□□□ -0.23
PAX6-228ENST00000533333 K7EIM0 57 aa13.59□□□□□ -0.23
PAX6-228ENST00000533333 LINC00269Q8N2A0 174 aa13.59□□□□□ -0.23
PAX6-228ENST00000533333 DOCK3Q8IZD9 2030 aa13.59□□□□□ -0.23
PAX6-228ENST00000533333 CRIPAKQ8N1N5 446 aa13.58□□□□□ -0.23
PAX6-228ENST00000533333 SERP1Q9Y6X1 66 aa13.58□□□□□ -0.24
PAX6-228ENST00000533333 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.58□□□□□ -0.24
PAX6-228ENST00000533333 IGHV1-58A0A0C4DH39 117 aa13.58□□□□□ -0.24
PAX6-228ENST00000533333 PRAC2D3DTV9 90 aa13.58□□□□□ -0.24
PAX6-228ENST00000533333 FAM19A5Q7Z5A7 132 aaPredicted RBP13.58□□□□□ -0.24
PAX6-228ENST00000533333 C11orf86A6NJI1 115 aa13.57□□□□□ -0.24
PAX6-228ENST00000533333 PLA2G2CQ5R387 149 aa13.57□□□□□ -0.24
PAX6-228ENST00000533333 NFE4Q86UQ8 179 aa13.57□□□□□ -0.24
PAX6-228ENST00000533333 SIPA1L1O43166 1804 aa13.57□□□□□ -0.24
PAX6-228ENST00000533333 LTBP1Q14766 1721 aa13.57□□□□□ -0.24
PAX6-228ENST00000533333 LY6G6EA0A0G2JKS1 128 aa13.57□□□□□ -0.24
PAX6-228ENST00000533333 REG3AQ06141 175 aa13.57□□□□□ -0.24
PAX6-228ENST00000533333 SPRNQ5BIV9 151 aa13.57□□□□□ -0.24
PAX6-228ENST00000533333 SPINK6Q6UWN8 80 aa13.57□□□□□ -0.24
PAX6-228ENST00000533333 SCXQ7RTU7 201 aa13.57□□□□□ -0.24
PAX6-228ENST00000533333 USF3Q68DE3 2245 aa13.57□□□□□ -0.24
PAX6-228ENST00000533333 LINC00173Q6ZV60 143 aa13.57□□□□□ -0.24
PAX6-228ENST00000533333 K7EMT4 169 aa13.57□□□□□ -0.24
PAX6-228ENST00000533333 SIRPDQ9H106 197 aa13.57□□□□□ -0.24
PAX6-228ENST00000533333 DOCK11Q5JSL3 2073 aa13.57□□□□□ -0.24
PAX6-228ENST00000533333 U3KQA8 63 aa13.56□□□□□ -0.24
PAX6-228ENST00000533333 NACAE9PAV3 2078 aa13.56□□□□□ -0.24
PAX6-228ENST00000533333 BRWD3Q6RI45 1802 aa13.56□□□□□ -0.24
PAX6-228ENST00000533333 GREB1Q4ZG55 1949 aa13.56□□□□□ -0.24
PAX6-228ENST00000533333 SLX1AQ9BQ83 275 aa13.56□□□□□ -0.24
PAX6-228ENST00000533333 WFDC2Q14508 124 aa13.56□□□□□ -0.24
PAX6-228ENST00000533333 FXYD2P54710 66 aa13.55□□□□□ -0.24
PAX6-228ENST00000533333 DEFB1P60022 68 aa13.55□□□□□ -0.24
PAX6-228ENST00000533333 C1orf147Q96MC9 270 aaPredicted RBP13.55□□□□□ -0.24
PAX6-228ENST00000533333 PHF3Q92576 2039 aaKnown RBP13.55□□□□□ -0.24
PAX6-228ENST00000533333 UBE2D3P61077 147 aa13.55□□□□□ -0.24
PAX6-228ENST00000533333 DEFB131BA0A096LNP1 70 aa13.54□□□□□ -0.24
PAX6-228ENST00000533333 TET1Q8NFU7 2136 aa13.54□□□□□ -0.24
PAX6-228ENST00000533333 MED12Q93074 2177 aa13.54□□□□□ -0.24
PAX6-228ENST00000533333 TRBV6-1A0A0K0K1D8 114 aa13.54□□□□□ -0.24
PAX6-228ENST00000533333 E9PLD3 99 aa13.54□□□□□ -0.24
PAX6-228ENST00000533333 H3BT86 120 aa13.54□□□□□ -0.24
PAX6-228ENST00000533333 HRCT1Q6UXD1 115 aa13.54□□□□□ -0.24
PAX6-228ENST00000533333 MDFICQ9P1T7 246 aa13.54□□□□□ -0.24
PAX6-228ENST00000533333 GTF3C1Q12789 2109 aa13.53□□□□□ -0.24
PAX6-228ENST00000533333 RALGAPA2Q2PPJ7 1873 aa13.53□□□□□ -0.24
PAX6-228ENST00000533333 MED14OSP0DP75 135 aa13.53□□□□□ -0.24
PAX6-228ENST00000533333 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.53□□□□□ -0.24
PAX6-228ENST00000533333 TTTY13Q9BZ97 58 aa13.53□□□□□ -0.24
PAX6-228ENST00000533333 CEMP1Q6PRD7 247 aaPredicted RBP13.53□□□□□ -0.24
PAX6-228ENST00000533333 Q6ZUT4 128 aa13.53□□□□□ -0.24
PAX6-228ENST00000533333 DNAJC9-AS1A6NH13 148 aa13.52□□□□□ -0.24
PAX6-228ENST00000533333 RIF1Q5UIP0 2472 aaKnown RBP13.52□□□□□ -0.24
PAX6-228ENST00000533333 LYPD6Q86Y78 171 aa13.52□□□□□ -0.24
PAX6-228ENST00000533333 MAP6D1Q9H9H5 199 aa13.52□□□□□ -0.25
PAX6-228ENST00000533333 ZFAND2AQ8N6M9 145 aa13.52□□□□□ -0.25
PAX6-228ENST00000533333 ARID2Q68CP9 1835 aa13.51□□□□□ -0.25
PAX6-228ENST00000533333 CHCHD10Q8WYQ3 142 aaPredicted RBP13.51□□□□□ -0.25
PAX6-228ENST00000533333 HIST2H2BDQ6DRA6 164 aa13.51□□□□□ -0.25
PAX6-228ENST00000533333 NDUFA11Q86Y39 141 aa13.51□□□□□ -0.25
PAX6-228ENST00000533333 C11orf53Q8IXP5 236 aa13.51□□□□□ -0.25
PAX6-228ENST00000533333 TMEM89A2RUT3 159 aa13.5□□□□□ -0.25
PAX6-228ENST00000533333 C20orf197Q8N268 126 aa13.5□□□□□ -0.25
PAX6-228ENST00000533333 PIP4P1Q86T03 277 aa13.5□□□□□ -0.25
PAX6-228ENST00000533333 HEATR5AQ86XA9 2040 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms