RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 A0A1B0GVY2 172 aa10.55□□□□□ -0.72
CPSF1-210ENST00000532935 GRIFINA4D1Z8 144 aa10.55□□□□□ -0.72
CPSF1-210ENST00000532935 NXPH4O95158 308 aa10.55□□□□□ -0.72
CPSF1-210ENST00000532935 MT-ND4LP03901 98 aa10.55□□□□□ -0.72
CPSF1-210ENST00000532935 ARMS2P0C7Q2 107 aa10.55□□□□□ -0.72
CPSF1-210ENST00000532935 RPL23P62829 140 aaKnown RBP10.55□□□□□ -0.72
CPSF1-210ENST00000532935 PIK3CD-AS1Q5SR53 167 aa10.55□□□□□ -0.72
CPSF1-210ENST00000532935 ZNF575Q86XF7 245 aa10.55□□□□□ -0.72
CPSF1-210ENST00000532935 ANAPC16Q96DE5 110 aa10.55□□□□□ -0.72
CPSF1-210ENST00000532935 MLST8Q9BVC4 326 aa10.55□□□□□ -0.72
CPSF1-210ENST00000532935 KRTAP1-5Q9BYS1 174 aa10.55□□□□□ -0.72
CPSF1-210ENST00000532935 TMSB15BA0A087X1C1 80 aa10.54□□□□□ -0.72
CPSF1-210ENST00000532935 A0A1W2PPQ1 181 aa10.54□□□□□ -0.72
CPSF1-210ENST00000532935 A8MWV9 139 aa10.54□□□□□ -0.72
CPSF1-210ENST00000532935 RPL35P42766 123 aaKnown RBP10.54□□□□□ -0.72
CPSF1-210ENST00000532935 SLC25A29Q8N8R3 303 aa10.54□□□□□ -0.72
CPSF1-210ENST00000532935 TRBV6-4A0A1B0GX49 114 aa10.53□□□□□ -0.72
CPSF1-210ENST00000532935 PPP1R2P9O14990 202 aa10.53□□□□□ -0.72
CPSF1-210ENST00000532935 SIVA1O15304 175 aa10.53□□□□□ -0.72
CPSF1-210ENST00000532935 DMRTA1Q5VZB9 504 aa10.53□□□□□ -0.72
CPSF1-210ENST00000532935 LINC01551Q86U37 167 aa10.53□□□□□ -0.72
CPSF1-210ENST00000532935 C15orf54Q8N8G6 183 aa10.53□□□□□ -0.72
CPSF1-210ENST00000532935 PRADC1Q9BSG0 188 aa10.53□□□□□ -0.72
CPSF1-210ENST00000532935 DERL1Q9BUN8 251 aa10.53□□□□□ -0.72
CPSF1-210ENST00000532935 GNG4P50150 75 aa10.52□□□□□ -0.73
CPSF1-210ENST00000532935 RHOHQ15669 191 aa10.52□□□□□ -0.73
CPSF1-210ENST00000532935 ADIRFQ15847 76 aa10.52□□□□□ -0.73
CPSF1-210ENST00000532935 ZFP2Q6ZN57 461 aa10.52□□□□□ -0.73
CPSF1-210ENST00000532935 SH2D6Q7Z4S9 175 aa10.52□□□□□ -0.73
CPSF1-210ENST00000532935 SYT8Q8NBV8 401 aa10.52□□□□□ -0.73
CPSF1-210ENST00000532935 JPT2Q9H910 190 aa10.52□□□□□ -0.73
CPSF1-210ENST00000532935 SCRT2Q9NQ03 307 aa10.52□□□□□ -0.73
CPSF1-210ENST00000532935 BIN3Q9NQY0 253 aa10.52□□□□□ -0.73
CPSF1-210ENST00000532935 PHLDA3Q9Y5J5 127 aa10.52□□□□□ -0.73
CPSF1-210ENST00000532935 MGST1P10620 155 aaKnown RBP10.51□□□□□ -0.73
CPSF1-210ENST00000532935 RPL19P84098 196 aaKnown RBP10.51□□□□□ -0.73
CPSF1-210ENST00000532935 PRR27Q6MZM9 219 aa10.51□□□□□ -0.73
CPSF1-210ENST00000532935 ISOC2Q96AB3 205 aa10.51□□□□□ -0.73
CPSF1-210ENST00000532935 CXCL1P09341 107 aa10.5□□□□□ -0.73
CPSF1-210ENST00000532935 CENPWQ5EE01 88 aa10.5□□□□□ -0.73
CPSF1-210ENST00000532935 UFSP1Q6NVU6 142 aa10.5□□□□□ -0.73
CPSF1-210ENST00000532935 Q6ZSN1 163 aa10.5□□□□□ -0.73
CPSF1-210ENST00000532935 OCC1Q8TAD7 63 aa10.5□□□□□ -0.73
CPSF1-210ENST00000532935 IMMP2LQ96T52 175 aa10.5□□□□□ -0.73
CPSF1-210ENST00000532935 SAMD10Q9BYL1 202 aa10.5□□□□□ -0.73
CPSF1-210ENST00000532935 TRBV20OR9-2A0A075B6H5 130 aa10.49□□□□□ -0.73
CPSF1-210ENST00000532935 M0R381 172 aa10.49□□□□□ -0.73
CPSF1-210ENST00000532935 MED14OSP0DP75 135 aa10.49□□□□□ -0.73
CPSF1-210ENST00000532935 BTF3P20290 206 aaKnown RBP10.49□□□□□ -0.73
CPSF1-210ENST00000532935 TIRAPP58753 221 aa10.49□□□□□ -0.73
CPSF1-210ENST00000532935 TNP2Q05952 138 aa10.49□□□□□ -0.73
CPSF1-210ENST00000532935 CBLN2Q8IUK8 224 aa10.49□□□□□ -0.73
CPSF1-210ENST00000532935 BTF3L4Q96K17 158 aa10.49□□□□□ -0.73
CPSF1-210ENST00000532935 RHODO00212 210 aa10.48□□□□□ -0.73
CPSF1-210ENST00000532935 WFDC10BQ8IUB3 73 aa10.48□□□□□ -0.73
CPSF1-210ENST00000532935 ZFP82Q8N141 532 aa10.48□□□□□ -0.73
CPSF1-210ENST00000532935 SFRP2Q96HF1 295 aa10.48□□□□□ -0.73
CPSF1-210ENST00000532935 IGLV2-8P01709 118 aa10.47□□□□□ -0.73
CPSF1-210ENST00000532935 LINC00315P59091 139 aa10.47□□□□□ -0.73
CPSF1-210ENST00000532935 FAM74A4Q5TZK3 123 aa10.47□□□□□ -0.73
CPSF1-210ENST00000532935 OSTCQ9NRP0 149 aa10.47□□□□□ -0.73
CPSF1-210ENST00000532935 KIAA1109Q2LD37 5005 aa10.47□□□□□ -0.73
CPSF1-210ENST00000532935 A0A087WWL8 130 aa10.46□□□□□ -0.73
CPSF1-210ENST00000532935 COLCA2A8K830 154 aa10.46□□□□□ -0.73
CPSF1-210ENST00000532935 S100PP25815 95 aa10.46□□□□□ -0.73
CPSF1-210ENST00000532935 FAM231DQ6ZW35 169 aa10.46□□□□□ -0.73
CPSF1-210ENST00000532935 C14orf178Q8N769 122 aaPredicted RBP10.46□□□□□ -0.73
CPSF1-210ENST00000532935 OR10G8Q8NGN5 311 aa10.46□□□□□ -0.73
CPSF1-210ENST00000532935 YPEL4Q96NS1 127 aa10.46□□□□□ -0.73
CPSF1-210ENST00000532935 HERC2O95714 4834 aa10.45□□□□□ -0.74
CPSF1-210ENST00000532935 TRAV9-1A0A075B6T8 112 aa10.45□□□□□ -0.74
CPSF1-210ENST00000532935 TRAV9-2A0A087WT02 112 aa10.45□□□□□ -0.74
CPSF1-210ENST00000532935 SNAI2O43623 268 aa10.45□□□□□ -0.74
CPSF1-210ENST00000532935 CRYGDP07320 174 aa10.45□□□□□ -0.74
CPSF1-210ENST00000532935 DNAH10OSP0CZ25 163 aa10.45□□□□□ -0.74
CPSF1-210ENST00000532935 OR10AG1Q8NH19 301 aa10.45□□□□□ -0.74
CPSF1-210ENST00000532935 ATP6V0E2Q8NHE4 81 aa10.45□□□□□ -0.74
CPSF1-210ENST00000532935 SSBP4Q9BWG4 385 aaPredicted RBP10.45□□□□□ -0.74
CPSF1-210ENST00000532935 GTSF1LQ9H1H1 148 aa10.45□□□□□ -0.74
CPSF1-210ENST00000532935 TRBV24-1A0A075B6N3 115 aa10.44□□□□□ -0.74
CPSF1-210ENST00000532935 GAGE12JA6NER3 117 aa10.44□□□□□ -0.74
CPSF1-210ENST00000532935 K7EN84 100 aa10.44□□□□□ -0.74
CPSF1-210ENST00000532935 K7EP13 123 aa10.44□□□□□ -0.74
CPSF1-210ENST00000532935 OR5AL1P0C617 328 aa10.44□□□□□ -0.74
CPSF1-210ENST00000532935 LINC00694P0DN24 101 aa10.44□□□□□ -0.74
CPSF1-210ENST00000532935 EVI2AP22794 236 aa10.44□□□□□ -0.74
CPSF1-210ENST00000532935 GAGE1Q13065 139 aa10.44□□□□□ -0.74
CPSF1-210ENST00000532935 GAGE4Q13068 117 aa10.44□□□□□ -0.74
CPSF1-210ENST00000532935 GAGE5Q13069 117 aa10.44□□□□□ -0.74
CPSF1-210ENST00000532935 GAGE13Q4V321 117 aa10.44□□□□□ -0.74
CPSF1-210ENST00000532935 KCNIP4Q6PIL6 250 aa10.44□□□□□ -0.74
CPSF1-210ENST00000532935 DAZAP1Q96EP5 407 aaKnown RBP10.44□□□□□ -0.74
CPSF1-210ENST00000532935 Q9UF83 564 aa10.44□□□□□ -0.74
CPSF1-210ENST00000532935 DNAH5Q8TE73 4624 aa10.43□□□□□ -0.74
CPSF1-210ENST00000532935 TRAV8-6A0A0B4J262 113 aa10.43□□□□□ -0.74
CPSF1-210ENST00000532935 MUC21A0A0G2JKD1 596 aa10.43□□□□□ -0.74
CPSF1-210ENST00000532935 MUC21A0A140T8X8 626 aa10.43□□□□□ -0.74
CPSF1-210ENST00000532935 C19orf71A6NCJ1 209 aa10.43□□□□□ -0.74
CPSF1-210ENST00000532935 ERVFC1-1P60608 527 aa10.43□□□□□ -0.74
CPSF1-210ENST00000532935 ELOBQ15370 118 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 284.9 ms