RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 CIDEAO60543 219 aa11.9□□□□□ -0.51
PPFIA1-222ENST00000532504 DNAL4O96015 105 aa11.9□□□□□ -0.51
PPFIA1-222ENST00000532504 WFDC10AQ9H1F0 79 aa11.9□□□□□ -0.51
PPFIA1-222ENST00000532504 A0A087X0K7 114 aa11.89□□□□□ -0.51
PPFIA1-222ENST00000532504 IGHV1-24A0A0C4DH33 117 aa11.89□□□□□ -0.51
PPFIA1-222ENST00000532504 GTF2H5Q6ZYL4 71 aa11.89□□□□□ -0.51
PPFIA1-222ENST00000532504 SIGLEC8Q9NYZ4 499 aa11.89□□□□□ -0.51
PPFIA1-222ENST00000532504 IGHV3-30P01768 117 aa11.89□□□□□ -0.51
PPFIA1-222ENST00000532504 IGHV3-33P01772 117 aa11.89□□□□□ -0.51
PPFIA1-222ENST00000532504 SMIM13P0DJ93 91 aa11.89□□□□□ -0.51
PPFIA1-222ENST00000532504 IGHV3-30-3P0DP02 117 aa11.89□□□□□ -0.51
PPFIA1-222ENST00000532504 IGHV3-30-5P0DP03 117 aa11.89□□□□□ -0.51
PPFIA1-222ENST00000532504 C11orf1Q9H5F2 150 aa11.89□□□□□ -0.51
PPFIA1-222ENST00000532504 GATA1P15976 413 aaPredicted RBP11.89□□□□□ -0.51
PPFIA1-222ENST00000532504 Q8N8P6 123 aa11.89□□□□□ -0.51
PPFIA1-222ENST00000532504 C11orf45Q8TAV5 145 aa11.89□□□□□ -0.51
PPFIA1-222ENST00000532504 ATP6V0E2Q8NHE4 81 aa11.88□□□□□ -0.51
PPFIA1-222ENST00000532504 MDFICQ9P1T7 246 aa11.88□□□□□ -0.51
PPFIA1-222ENST00000532504 PRIMA1Q86XR5 153 aa11.88□□□□□ -0.51
PPFIA1-222ENST00000532504 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.88□□□□□ -0.51
PPFIA1-222ENST00000532504 IGKV2-29A2NJV5 120 aaPredicted RBP11.88□□□□□ -0.51
PPFIA1-222ENST00000532504 S100A7L2Q5SY68 101 aa11.88□□□□□ -0.51
PPFIA1-222ENST00000532504 CPAMD8Q8IZJ3 1885 aa11.88□□□□□ -0.51
PPFIA1-222ENST00000532504 SFTA2Q6UW10 78 aa11.88□□□□□ -0.51
PPFIA1-222ENST00000532504 RMI2Q96E14 147 aa11.88□□□□□ -0.51
PPFIA1-222ENST00000532504 ZFAND3Q9H8U3 227 aa11.88□□□□□ -0.51
PPFIA1-222ENST00000532504 HHLA3Q9XRX5 114 aa11.88□□□□□ -0.51
PPFIA1-222ENST00000532504 IGLV1-40P01703 118 aa11.87□□□□□ -0.51
PPFIA1-222ENST00000532504 SMIM2Q9BVW6 85 aa11.87□□□□□ -0.51
PPFIA1-222ENST00000532504 KLK5Q9Y337 293 aaPredicted RBP11.87□□□□□ -0.51
PPFIA1-222ENST00000532504 RBMY1BA6NDE4 496 aaKnown RBP11.87□□□□□ -0.51
PPFIA1-222ENST00000532504 RBMY1EA6NEQ0 496 aaKnown RBP11.87□□□□□ -0.51
PPFIA1-222ENST00000532504 NDUFA7O95182 113 aa11.87□□□□□ -0.51
PPFIA1-222ENST00000532504 RBMY1DP0C7P1 496 aaKnown RBP11.87□□□□□ -0.51
PPFIA1-222ENST00000532504 RBMY1A1P0DJD3 496 aaKnown RBP11.87□□□□□ -0.51
PPFIA1-222ENST00000532504 RBMY1CP0DJD4 496 aa11.87□□□□□ -0.51
PPFIA1-222ENST00000532504 HIST1H2BLQ99880 126 aa11.87□□□□□ -0.51
PPFIA1-222ENST00000532504 CTAG1AP78358 180 aa11.87□□□□□ -0.51
PPFIA1-222ENST00000532504 C18orf32Q8TCD1 76 aa11.87□□□□□ -0.51
PPFIA1-222ENST00000532504 PLNP26678 52 aa11.86□□□□□ -0.51
PPFIA1-222ENST00000532504 TIMM21Q9BVV7 248 aa11.86□□□□□ -0.51
PPFIA1-222ENST00000532504 K7EQD1 137 aa11.86□□□□□ -0.51
PPFIA1-222ENST00000532504 KLF12Q9Y4X4 402 aa11.86□□□□□ -0.51
PPFIA1-222ENST00000532504 ZNF503Q96F45 646 aa11.86□□□□□ -0.51
PPFIA1-222ENST00000532504 XCL1P47992 114 aa11.85□□□□□ -0.51
PPFIA1-222ENST00000532504 PCSK5Q92824 1860 aa11.85□□□□□ -0.51
PPFIA1-222ENST00000532504 C20orf173Q96LM9 149 aa11.85□□□□□ -0.51
PPFIA1-222ENST00000532504 ZC2HC1BQ5TFG8 222 aa11.85□□□□□ -0.51
PPFIA1-222ENST00000532504 RPL39LQ96EH5 51 aaKnown RBP11.85□□□□□ -0.51
PPFIA1-222ENST00000532504 FABP2P12104 132 aa11.85□□□□□ -0.51
PPFIA1-222ENST00000532504 CHAC1Q9BUX1 264 aa11.85□□□□□ -0.51
PPFIA1-222ENST00000532504 JPT2Q9H910 190 aa11.85□□□□□ -0.51
PPFIA1-222ENST00000532504 SUMO4Q6EEV6 95 aa11.85□□□□□ -0.51
PPFIA1-222ENST00000532504 PAX2Q02962 417 aa11.84□□□□□ -0.51
PPFIA1-222ENST00000532504 TMEM263Q8WUH6 116 aaKnown RBP11.84□□□□□ -0.51
PPFIA1-222ENST00000532504 PLEKHB2Q96CS7 222 aa11.84□□□□□ -0.51
PPFIA1-222ENST00000532504 IGLV10-54A0A075B6I4 117 aa11.84□□□□□ -0.51
PPFIA1-222ENST00000532504 LINC01559Q495D7 138 aa11.84□□□□□ -0.51
PPFIA1-222ENST00000532504 COL5A1-AS1Q5SY13 56 aa11.84□□□□□ -0.51
PPFIA1-222ENST00000532504 SPATA25Q9BR10 227 aa11.84□□□□□ -0.51
PPFIA1-222ENST00000532504 FAM222AQ5U5X8 452 aa11.83□□□□□ -0.52
PPFIA1-222ENST00000532504 C3orf79P0CE67 100 aa11.83□□□□□ -0.52
PPFIA1-222ENST00000532504 PFN2P35080 140 aa11.83□□□□□ -0.52
PPFIA1-222ENST00000532504 HIST3H2BBQ8N257 126 aa11.83□□□□□ -0.52
PPFIA1-222ENST00000532504 TP53TG3Q9ULZ0 132 aa11.83□□□□□ -0.52
PPFIA1-222ENST00000532504 hDV102S1A0JD36 115 aa11.83□□□□□ -0.52
PPFIA1-222ENST00000532504 DDTP30046 118 aa11.83□□□□□ -0.52
PPFIA1-222ENST00000532504 GDF5OSQ5U4N7 250 aa11.83□□□□□ -0.52
PPFIA1-222ENST00000532504 UBE2CO00762 179 aa11.82□□□□□ -0.52
PPFIA1-222ENST00000532504 VPS25Q9BRG1 176 aa11.82□□□□□ -0.52
PPFIA1-222ENST00000532504 C1orf43Q9BWL3 253 aa11.82□□□□□ -0.52
PPFIA1-222ENST00000532504 CST9LQ9H4G1 147 aa11.82□□□□□ -0.52
PPFIA1-222ENST00000532504 Q6ZTI0 123 aa11.82□□□□□ -0.52
PPFIA1-222ENST00000532504 LYPD6BQ8NI32 183 aa11.82□□□□□ -0.52
PPFIA1-222ENST00000532504 CDH23Q9H251 3354 aa11.82□□□□□ -0.52
PPFIA1-222ENST00000532504 SYS1-DBNDD2H3BUS1 97 aa11.81□□□□□ -0.52
PPFIA1-222ENST00000532504 AMTNQ6UX39 209 aa11.81□□□□□ -0.52
PPFIA1-222ENST00000532504 PMVKQ15126 192 aa11.81□□□□□ -0.52
PPFIA1-222ENST00000532504 NXPH4O95158 308 aa11.8□□□□□ -0.52
PPFIA1-222ENST00000532504 TMEM141Q96I45 108 aa11.8□□□□□ -0.52
PPFIA1-222ENST00000532504 C20orf78Q9BR46 151 aa11.8□□□□□ -0.52
PPFIA1-222ENST00000532504 SLC25A20O43772 301 aa11.8□□□□□ -0.52
PPFIA1-222ENST00000532504 EDN2P20800 178 aa11.8□□□□□ -0.52
PPFIA1-222ENST00000532504 HCFC1P51610 2035 aa11.8□□□□□ -0.52
PPFIA1-222ENST00000532504 GAGE10A6NGK3 116 aa11.8□□□□□ -0.52
PPFIA1-222ENST00000532504 MYMXA0A1B0GTQ4 84 aa11.79□□□□□ -0.52
PPFIA1-222ENST00000532504 ZNF80P51504 273 aaPredicted RBP11.79□□□□□ -0.52
PPFIA1-222ENST00000532504 NHP2Q9NX24 153 aaKnown RBP11.79□□□□□ -0.52
PPFIA1-222ENST00000532504 C20orf144Q9BQM9 153 aa11.79□□□□□ -0.52
PPFIA1-222ENST00000532504 KIR3DS1Q14943 382 aa11.79□□□□□ -0.52
PPFIA1-222ENST00000532504 TRAV26-1A0A087WT03 109 aa11.79□□□□□ -0.52
PPFIA1-222ENST00000532504 LINC00587B1AMM8 73 aa11.78□□□□□ -0.52
PPFIA1-222ENST00000532504 STPG4Q8N801 248 aa11.78□□□□□ -0.52
PPFIA1-222ENST00000532504 IL17DQ8TAD2 202 aa11.78□□□□□ -0.52
PPFIA1-222ENST00000532504 PRSS29PA6NIE9 313 aa11.78□□□□□ -0.52
PPFIA1-222ENST00000532504 TMEM238C9JI98 176 aa11.78□□□□□ -0.52
PPFIA1-222ENST00000532504 PRO0255Q9UI72 69 aa11.77□□□□□ -0.52
PPFIA1-222ENST00000532504 ZNF292O60281 2723 aa11.77□□□□□ -0.52
PPFIA1-222ENST00000532504 C5orf38Q86SI9 138 aa11.77□□□□□ -0.53
PPFIA1-222ENST00000532504 DEFB131BA0A096LNP1 70 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms