RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 KIF25-AS1Q9Y6Z4 181 aa9.54□□□□□ -0.88
TSPAN4-220ENST00000532375 PKD1P98161 4303 aa9.53□□□□□ -0.88
TSPAN4-220ENST00000532375 MUC21A0A0G2JKD1 596 aa9.53□□□□□ -0.88
TSPAN4-220ENST00000532375 MUC21A0A140T8X8 626 aa9.53□□□□□ -0.88
TSPAN4-220ENST00000532375 SRIP30626 198 aa9.53□□□□□ -0.88
TSPAN4-220ENST00000532375 SRSF3P84103 164 aaKnown RBP9.53□□□□□ -0.88
TSPAN4-220ENST00000532375 RHOHQ15669 191 aa9.53□□□□□ -0.88
TSPAN4-220ENST00000532375 DAZAP1Q96EP5 407 aaKnown RBP9.53□□□□□ -0.88
TSPAN4-220ENST00000532375 A0A087WWL8 130 aa9.52□□□□□ -0.89
TSPAN4-220ENST00000532375 P01737 135 aa9.52□□□□□ -0.89
TSPAN4-220ENST00000532375 TIRAPP58753 221 aa9.52□□□□□ -0.89
TSPAN4-220ENST00000532375 LINC00315P59091 139 aa9.52□□□□□ -0.89
TSPAN4-220ENST00000532375 RPS20P60866 119 aaKnown RBP9.52□□□□□ -0.89
TSPAN4-220ENST00000532375 RNASE7Q9H1E1 156 aaKnown RBP9.52□□□□□ -0.89
TSPAN4-220ENST00000532375 BIN3Q9NQY0 253 aa9.52□□□□□ -0.89
TSPAN4-220ENST00000532375 LY96Q9Y6Y9 160 aa9.52□□□□□ -0.89
TSPAN4-220ENST00000532375 RHODO00212 210 aa9.51□□□□□ -0.89
TSPAN4-220ENST00000532375 PRADC1Q9BSG0 188 aa9.51□□□□□ -0.89
TSPAN4-220ENST00000532375 MSRB1Q9NZV6 116 aa9.51□□□□□ -0.89
TSPAN4-220ENST00000532375 DYNC1H1Q14204 4646 aaKnown RBP9.51□□□□□ -0.89
TSPAN4-220ENST00000532375 FAM74A4Q5TZK3 123 aa9.5□□□□□ -0.89
TSPAN4-220ENST00000532375 FAM231DQ6ZW35 169 aa9.5□□□□□ -0.89
TSPAN4-220ENST00000532375 SH2D6Q7Z4S9 175 aa9.5□□□□□ -0.89
TSPAN4-220ENST00000532375 LINC01551Q86U37 167 aa9.5□□□□□ -0.89
TSPAN4-220ENST00000532375 FER1L6-AS1Q8NA97 138 aa9.5□□□□□ -0.89
TSPAN4-220ENST00000532375 A0A1B0GVY2 172 aa9.49□□□□□ -0.89
TSPAN4-220ENST00000532375 SIVA1O15304 175 aa9.49□□□□□ -0.89
TSPAN4-220ENST00000532375 CEBPGP53567 150 aa9.49□□□□□ -0.89
TSPAN4-220ENST00000532375 C1orf134Q5TEV5 83 aa9.49□□□□□ -0.89
TSPAN4-220ENST00000532375 SPANXN1Q5VSR9 72 aa9.49□□□□□ -0.89
TSPAN4-220ENST00000532375 LYZL1Q6UWQ5 148 aa9.49□□□□□ -0.89
TSPAN4-220ENST00000532375 WFDC10BQ8IUB3 73 aa9.49□□□□□ -0.89
TSPAN4-220ENST00000532375 GTSF1Q8WW33 167 aa9.49□□□□□ -0.89
TSPAN4-220ENST00000532375 SMIM7Q9BQ49 75 aa9.49□□□□□ -0.89
TSPAN4-220ENST00000532375 RPP21Q9H633 154 aaKnown RBP9.49□□□□□ -0.89
TSPAN4-220ENST00000532375 HECTD4Q9Y4D8 3996 aa9.48□□□□□ -0.89
TSPAN4-220ENST00000532375 A0A1W2PPQ1 181 aa9.48□□□□□ -0.89
TSPAN4-220ENST00000532375 ZNF727A8MUV8 499 aa9.48□□□□□ -0.89
TSPAN4-220ENST00000532375 CTRLP40313 264 aa9.48□□□□□ -0.89
TSPAN4-220ENST00000532375 SSTP61278 116 aa9.48□□□□□ -0.89
TSPAN4-220ENST00000532375 LINC00336Q6ZUF6 198 aa9.48□□□□□ -0.89
TSPAN4-220ENST00000532375 ATP6V0E2Q8NHE4 81 aa9.48□□□□□ -0.89
TSPAN4-220ENST00000532375 CNFNQ9BYD5 112 aa9.48□□□□□ -0.89
TSPAN4-220ENST00000532375 GAGE12JA6NER3 117 aa9.47□□□□□ -0.89
TSPAN4-220ENST00000532375 F2Z2F3 143 aa9.47□□□□□ -0.89
TSPAN4-220ENST00000532375 DNAH10OSP0CZ25 163 aa9.47□□□□□ -0.89
TSPAN4-220ENST00000532375 RAB4BP61018 213 aa9.47□□□□□ -0.89
TSPAN4-220ENST00000532375 IFITM2Q01629 132 aa9.47□□□□□ -0.89
TSPAN4-220ENST00000532375 GAGE1Q13065 139 aa9.47□□□□□ -0.89
TSPAN4-220ENST00000532375 GAGE4Q13068 117 aa9.47□□□□□ -0.89
TSPAN4-220ENST00000532375 GAGE5Q13069 117 aa9.47□□□□□ -0.89
TSPAN4-220ENST00000532375 GAGE13Q4V321 117 aa9.47□□□□□ -0.89
TSPAN4-220ENST00000532375 WDR73Q6P4I2 378 aa9.47□□□□□ -0.89
TSPAN4-220ENST00000532375 C6orf223Q8N319 242 aa9.47□□□□□ -0.89
TSPAN4-220ENST00000532375 GTSF1LQ9H1H1 148 aa9.47□□□□□ -0.89
TSPAN4-220ENST00000532375 SMDT1Q9H4I9 107 aa9.47□□□□□ -0.89
TSPAN4-220ENST00000532375 TRBV10-1A0A0K0K1A3 114 aa9.46□□□□□ -0.9
TSPAN4-220ENST00000532375 XKRY2A2RUG3 117 aa9.46□□□□□ -0.9
TSPAN4-220ENST00000532375 NTF3P20783 257 aa9.46□□□□□ -0.9
TSPAN4-220ENST00000532375 FOXA3P55318 350 aaPredicted RBP9.46□□□□□ -0.9
TSPAN4-220ENST00000532375 CACNG7P62955 275 aa9.46□□□□□ -0.9
TSPAN4-220ENST00000532375 OR10G8Q8NGN5 311 aa9.46□□□□□ -0.9
TSPAN4-220ENST00000532375 PRSS29PA6NIE9 313 aa9.45□□□□□ -0.9
TSPAN4-220ENST00000532375 GATCO43716 136 aaKnown RBP9.45□□□□□ -0.9
TSPAN4-220ENST00000532375 PEA15Q15121 130 aa9.45□□□□□ -0.9
TSPAN4-220ENST00000532375 FAM74A3Q4VXF1 159 aa9.45□□□□□ -0.9
TSPAN4-220ENST00000532375 TTC32Q5I0X7 151 aa9.45□□□□□ -0.9
TSPAN4-220ENST00000532375 LELP1Q5T871 98 aa9.45□□□□□ -0.9
TSPAN4-220ENST00000532375 TPPP3Q9BW30 176 aa9.45□□□□□ -0.9
TSPAN4-220ENST00000532375 OSTCQ9NRP0 149 aa9.45□□□□□ -0.9
TSPAN4-220ENST00000532375 BTF3P20290 206 aaKnown RBP9.44□□□□□ -0.9
TSPAN4-220ENST00000532375 EVI2AP22794 236 aa9.44□□□□□ -0.9
TSPAN4-220ENST00000532375 ERVFC1-1P60608 527 aa9.44□□□□□ -0.9
TSPAN4-220ENST00000532375 UBE2D3P61077 147 aa9.44□□□□□ -0.9
TSPAN4-220ENST00000532375 RPL23P62829 140 aaKnown RBP9.44□□□□□ -0.9
TSPAN4-220ENST00000532375 UBE2D2P62837 147 aa9.44□□□□□ -0.9
TSPAN4-220ENST00000532375 TMEM241Q24JQ0 296 aa9.44□□□□□ -0.9
TSPAN4-220ENST00000532375 CT83Q5H943 113 aa9.44□□□□□ -0.9
TSPAN4-220ENST00000532375 Q6ZRN7 208 aaPredicted RBP9.44□□□□□ -0.9
TSPAN4-220ENST00000532375 NEXN-AS1Q8NBZ9 246 aa9.44□□□□□ -0.9
TSPAN4-220ENST00000532375 ISOC2Q96AB3 205 aa9.44□□□□□ -0.9
TSPAN4-220ENST00000532375 AP1S3Q96PC3 154 aa9.44□□□□□ -0.9
TSPAN4-220ENST00000532375 TNFRSF18Q9Y5U5 241 aa9.44□□□□□ -0.9
TSPAN4-220ENST00000532375 PKHD1P08F94 4074 aa9.43□□□□□ -0.9
TSPAN4-220ENST00000532375 TRBV7-3A0A075B6L6 115 aa9.43□□□□□ -0.9
TSPAN4-220ENST00000532375 TNP2Q05952 138 aa9.43□□□□□ -0.9
TSPAN4-220ENST00000532375 V9GYV3 84 aa9.43□□□□□ -0.9
TSPAN4-220ENST00000532375 IGHV3-38A0A0C4DH36 116 aa9.42□□□□□ -0.9
TSPAN4-220ENST00000532375 A8MWL6 223 aa9.42□□□□□ -0.9
TSPAN4-220ENST00000532375 M0QY20 66 aa9.42□□□□□ -0.9
TSPAN4-220ENST00000532375 ZNF56Q15929 161 aa9.42□□□□□ -0.9
TSPAN4-220ENST00000532375 LINC01556Q5JQF7 62 aa9.42□□□□□ -0.9
TSPAN4-220ENST00000532375 SOHLH1Q5JUK2 328 aa9.42□□□□□ -0.9
TSPAN4-220ENST00000532375 CLLU1Q5K131 121 aa9.42□□□□□ -0.9
TSPAN4-220ENST00000532375 NAT8Q9UHE5 227 aa9.42□□□□□ -0.9
TSPAN4-220ENST00000532375 K7EP13 123 aa9.41□□□□□ -0.9
TSPAN4-220ENST00000532375 RPL36AP83881 106 aaKnown RBP9.41□□□□□ -0.9
TSPAN4-220ENST00000532375 Q8N3U1 123 aa9.41□□□□□ -0.9
TSPAN4-220ENST00000532375 TSKUQ8WUA8 353 aa9.41□□□□□ -0.9
TSPAN4-220ENST00000532375 RPL36ALQ969Q0 106 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms