RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 IGLV4-69A0A075B6H9 119 aa11.23□□□□□ -0.61
NXF1-213ENST00000532297 UBE2E1P51965 193 aa11.23□□□□□ -0.61
NXF1-213ENST00000532297 METTL26Q96S19 204 aa11.23□□□□□ -0.61
NXF1-213ENST00000532297 CRIP2P52943 208 aaPredicted RBP11.23□□□□□ -0.61
NXF1-213ENST00000532297 KLRB1Q12918 225 aa11.23□□□□□ -0.61
NXF1-213ENST00000532297 EEF1AKMT3Q96AZ1 226 aa11.23□□□□□ -0.61
NXF1-213ENST00000532297 C20orf173Q96LM9 149 aa11.23□□□□□ -0.61
NXF1-213ENST00000532297 SNCGO76070 127 aa11.22□□□□□ -0.61
NXF1-213ENST00000532297 SRD5A1P18405 259 aa11.22□□□□□ -0.61
NXF1-213ENST00000532297 TSPEAR-AS2P59090 65 aa11.22□□□□□ -0.61
NXF1-213ENST00000532297 GAGE2BQ13066 116 aa11.22□□□□□ -0.61
NXF1-213ENST00000532297 GAGE2EQ4V326 116 aa11.22□□□□□ -0.61
NXF1-213ENST00000532297 TRPT1Q86TN4 253 aaKnown RBP11.22□□□□□ -0.61
NXF1-213ENST00000532297 SLC25A29Q8N8R3 303 aa11.22□□□□□ -0.61
NXF1-213ENST00000532297 GAGE2DQ9UEU5 116 aa11.22□□□□□ -0.61
NXF1-213ENST00000532297 PHLDA3Q9Y5J5 127 aa11.22□□□□□ -0.61
NXF1-213ENST00000532297 RHODO00212 210 aa11.22□□□□□ -0.61
NXF1-213ENST00000532297 TMEM170BQ5T4T1 132 aa11.22□□□□□ -0.61
NXF1-213ENST00000532297 UNQ9165/PRO28630Q6UXU0 137 aa11.22□□□□□ -0.61
NXF1-213ENST00000532297 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.21□□□□□ -0.616e-7■■■□□ 18.9
NXF1-213ENST00000532297 CENPVL3A0A0U1RRI6 287 aa11.21□□□□□ -0.61
NXF1-213ENST00000532297 TSHBP01222 138 aa11.21□□□□□ -0.61
NXF1-213ENST00000532297 IGHV3-11P01762 117 aa11.21□□□□□ -0.61
NXF1-213ENST00000532297 EDN2P20800 178 aa11.21□□□□□ -0.61
NXF1-213ENST00000532297 ARL3P36405 182 aa11.21□□□□□ -0.61
NXF1-213ENST00000532297 LY6EQ16553 131 aa11.21□□□□□ -0.61
NXF1-213ENST00000532297 PAPPA-AS1Q5QFB9 102 aa11.21□□□□□ -0.61
NXF1-213ENST00000532297 MRPL53Q96EL3 112 aaKnown RBP11.21□□□□□ -0.61
NXF1-213ENST00000532297 TP53TG1Q9Y2A0 90 aa11.21□□□□□ -0.61
NXF1-213ENST00000532297 FLNCQ14315 2725 aa11.21□□□□□ -0.62
NXF1-213ENST00000532297 TRAV4A0A0B4J268 109 aa11.21□□□□□ -0.62
NXF1-213ENST00000532297 F6UB75 175 aa11.21□□□□□ -0.62
NXF1-213ENST00000532297 H7C2G1 150 aa11.21□□□□□ -0.62
NXF1-213ENST00000532297 NDUFV3P56181 108 aaKnown RBP11.21□□□□□ -0.62
NXF1-213ENST00000532297 ASIPP42127 132 aa11.2□□□□□ -0.62
NXF1-213ENST00000532297 C16orf92Q96LL3 132 aa11.2□□□□□ -0.62
NXF1-213ENST00000532297 CSPG4Q6UVK1 2322 aa11.2□□□□□ -0.62
NXF1-213ENST00000532297 ZANQ9Y493 2812 aa11.2□□□□□ -0.62
NXF1-213ENST00000532297 TRBV7-1A0A0A6YYK4 115 aa11.2□□□□□ -0.62
NXF1-213ENST00000532297 CRLF1O75462 422 aa11.2□□□□□ -0.62
NXF1-213ENST00000532297 LMO4P61968 165 aa11.2□□□□□ -0.62
NXF1-213ENST00000532297 PMVKQ15126 192 aa11.2□□□□□ -0.62
NXF1-213ENST00000532297 CFAP46Q8IYW2 2715 aa11.19□□□□□ -0.62
NXF1-213ENST00000532297 NPFFO15130 113 aa11.19□□□□□ -0.62
NXF1-213ENST00000532297 KLK9Q2XQG4 91 aa11.19□□□□□ -0.62
NXF1-213ENST00000532297 TTC32Q5I0X7 151 aa11.19□□□□□ -0.62
NXF1-213ENST00000532297 KLK9Q9UKQ9 250 aa11.19□□□□□ -0.62
NXF1-213ENST00000532297 A4D1N5 150 aa11.18□□□□□ -0.62
NXF1-213ENST00000532297 GPHB5Q86YW7 130 aa11.18□□□□□ -0.62
NXF1-213ENST00000532297 C5orf56Q8N8D9 126 aa11.18□□□□□ -0.62
NXF1-213ENST00000532297 NTN5Q8WTR8 489 aaPredicted RBP11.18□□□□□ -0.62
NXF1-213ENST00000532297 GAGE12JA6NER3 117 aa11.18□□□□□ -0.62
NXF1-213ENST00000532297 IGIPA6NJ69 53 aa11.18□□□□□ -0.62
NXF1-213ENST00000532297 GAGE7O76087 117 aa11.18□□□□□ -0.62
NXF1-213ENST00000532297 GAGE12FP0CL80 117 aa11.18□□□□□ -0.62
NXF1-213ENST00000532297 GAGE12GP0CL81 117 aa11.18□□□□□ -0.62
NXF1-213ENST00000532297 GAGE12IP0CL82 117 aa11.18□□□□□ -0.62
NXF1-213ENST00000532297 RPL39P62891 51 aaKnown RBP11.18□□□□□ -0.62
NXF1-213ENST00000532297 GAGE4Q13068 117 aa11.18□□□□□ -0.62
NXF1-213ENST00000532297 DOPEY2Q9Y3R5 2298 aa11.18□□□□□ -0.62
NXF1-213ENST00000532297 IGHV1-69DA0A0B4J2H0 117 aa11.17□□□□□ -0.62
NXF1-213ENST00000532297 CCDC179H3BU77 68 aa11.17□□□□□ -0.62
NXF1-213ENST00000532297 J3QQQ9 107 aa11.17□□□□□ -0.62
NXF1-213ENST00000532297 PPP1R17O96001 155 aa11.17□□□□□ -0.62
NXF1-213ENST00000532297 TRAV21A0A0B4J279 112 aa11.17□□□□□ -0.62
NXF1-213ENST00000532297 LGALS3P17931 250 aaKnown RBP11.17□□□□□ -0.62
NXF1-213ENST00000532297 Q8N1Y9 231 aa11.17□□□□□ -0.62
NXF1-213ENST00000532297 ZNRF2Q8NHG8 242 aa11.17□□□□□ -0.62
NXF1-213ENST00000532297 IGHV3-33P01772 117 aa11.16□□□□□ -0.62
NXF1-213ENST00000532297 IFITM1P13164 125 aa11.16□□□□□ -0.62
NXF1-213ENST00000532297 AMELXQ99217 191 aa11.16□□□□□ -0.62
NXF1-213ENST00000532297 M0QXV9 152 aa11.16□□□□□ -0.62
NXF1-213ENST00000532297 EIF4EBP3O60516 100 aaPredicted RBP11.16□□□□□ -0.62
NXF1-213ENST00000532297 ZFAND2AQ8N6M9 145 aa11.16□□□□□ -0.62
NXF1-213ENST00000532297 U3KQE9 123 aa11.16□□□□□ -0.62
NXF1-213ENST00000532297 GNRH2O43555 120 aa11.16□□□□□ -0.62
NXF1-213ENST00000532297 RPL11P62913 178 aaKnown RBP11.16□□□□□ -0.62
NXF1-213ENST00000532297 LENEPQ9Y5L5 61 aa11.16□□□□□ -0.62
NXF1-213ENST00000532297 Q1RN00 199 aa11.15□□□□□ -0.62
NXF1-213ENST00000532297 TMEM263Q8WUH6 116 aaKnown RBP11.15□□□□□ -0.62
NXF1-213ENST00000532297 CENPEQ02224 2701 aa11.15□□□□□ -0.62
NXF1-213ENST00000532297 TRAV2A0A0B4J234 112 aa11.15□□□□□ -0.63
NXF1-213ENST00000532297 TRAV41A0A0B4J266 112 aa11.15□□□□□ -0.63
NXF1-213ENST00000532297 IGHV4-38-2P0DP08 117 aa11.15□□□□□ -0.63
NXF1-213ENST00000532297 UCNP55089 124 aa11.15□□□□□ -0.63
NXF1-213ENST00000532297 SORL1Q92673 2214 aa11.14□□□□□ -0.63
NXF1-213ENST00000532297 IGHV4-39P01824 125 aa11.14□□□□□ -0.63
NXF1-213ENST00000532297 ELANEP08246 267 aa11.14□□□□□ -0.63
NXF1-213ENST00000532297 RNASE4P34096 147 aaKnown RBP11.14□□□□□ -0.63
NXF1-213ENST00000532297 TMEM141Q96I45 108 aa11.14□□□□□ -0.63
NXF1-213ENST00000532297 LINC00477Q96M19 166 aa11.14□□□□□ -0.63
NXF1-213ENST00000532297 POLQO75417 2590 aa11.14□□□□□ -0.63
NXF1-213ENST00000532297 TRBV7-9A0A0J9YWB2 115 aa11.14□□□□□ -0.63
NXF1-213ENST00000532297 TEX49A0A1B0GTD5 131 aa11.14□□□□□ -0.63
NXF1-213ENST00000532297 C9orf139Q6ZV77 190 aa11.14□□□□□ -0.63
NXF1-213ENST00000532297 OR10J6PQ8NGY7 276 aa11.14□□□□□ -0.63
NXF1-213ENST00000532297 PKD1L2Q7Z442 2459 aa11.14□□□□□ -0.63
NXF1-213ENST00000532297 MUC4Q99102 2169 aa11.13□□□□□ -0.63
NXF1-213ENST00000532297 TMEM95Q3KNT9 176 aa11.13□□□□□ -0.63
NXF1-213ENST00000532297 TRAV8-4A0A0B4J246 113 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms