RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 USP9XQ93008 2570 aaPredicted RBP12.5□□□□□ -0.41
VPS26B-206ENST00000531741 IGHV1OR15-1A0A075B7D0 117 aa12.5□□□□□ -0.41
VPS26B-206ENST00000531741 CRYGDP07320 174 aa12.5□□□□□ -0.41
VPS26B-206ENST00000531741 FOXI2Q6ZQN5 318 aa12.5□□□□□ -0.41
VPS26B-206ENST00000531741 NHP2Q9NX24 153 aaKnown RBP12.5□□□□□ -0.41
VPS26B-206ENST00000531741 A0A087WWL8 130 aa12.5□□□□□ -0.41
VPS26B-206ENST00000531741 TSHBP01222 138 aa12.5□□□□□ -0.41
VPS26B-206ENST00000531741 COX6B1P14854 86 aa12.5□□□□□ -0.41
VPS26B-206ENST00000531741 HOXD3P31249 432 aaPredicted RBP12.5□□□□□ -0.41
VPS26B-206ENST00000531741 Q8N1Y9 231 aa12.5□□□□□ -0.41
VPS26B-206ENST00000531741 TP53TG1Q9Y2A0 90 aa12.5□□□□□ -0.41
VPS26B-206ENST00000531741 SDHAF1A6NFY7 115 aa12.49□□□□□ -0.41
VPS26B-206ENST00000531741 NEGR1Q7Z3B1 354 aa12.49□□□□□ -0.41
VPS26B-206ENST00000531741 MDFICQ9P1T7 246 aa12.49□□□□□ -0.41
VPS26B-206ENST00000531741 A0A1B0GWB2 263 aa12.49□□□□□ -0.41
VPS26B-206ENST00000531741 F5H697 171 aa12.49□□□□□ -0.41
VPS26B-206ENST00000531741 PMVKQ15126 192 aa12.49□□□□□ -0.41
VPS26B-206ENST00000531741 AMTNQ6UX39 209 aa12.49□□□□□ -0.41
VPS26B-206ENST00000531741 HIST1H4GQ99525 98 aa12.49□□□□□ -0.41
VPS26B-206ENST00000531741 PRADC1Q9BSG0 188 aa12.49□□□□□ -0.41
VPS26B-206ENST00000531741 TRAV12-2A0A075B6T6 113 aa12.48□□□□□ -0.41
VPS26B-206ENST00000531741 K7ERJ3 54 aa12.48□□□□□ -0.41
VPS26B-206ENST00000531741 M0QY20 66 aa12.48□□□□□ -0.41
VPS26B-206ENST00000531741 IGHV4-31P0DP07 118 aa12.48□□□□□ -0.41
VPS26B-206ENST00000531741 IGSF10Q6WRI0 2623 aa12.48□□□□□ -0.41
VPS26B-206ENST00000531741 IGLV4-69A0A075B6H9 119 aa12.47□□□□□ -0.41
VPS26B-206ENST00000531741 SPINK13Q1W4C9 94 aa12.47□□□□□ -0.41
VPS26B-206ENST00000531741 ZNF256Q9Y2P7 627 aaPredicted RBP12.47□□□□□ -0.41
VPS26B-206ENST00000531741 RHOHQ15669 191 aa12.47□□□□□ -0.41
VPS26B-206ENST00000531741 C12orf74Q32Q52 190 aa12.47□□□□□ -0.41
VPS26B-206ENST00000531741 TRGV11A0A075B6L2 103 aa12.46□□□□□ -0.41
VPS26B-206ENST00000531741 A8MTW9 85 aa12.46□□□□□ -0.41
VPS26B-206ENST00000531741 IGKV3-20P01619 116 aa12.46□□□□□ -0.41
VPS26B-206ENST00000531741 NSUN5P1Q3KNT7 163 aa12.46□□□□□ -0.41
VPS26B-206ENST00000531741 TRPT1Q86TN4 253 aaKnown RBP12.46□□□□□ -0.41
VPS26B-206ENST00000531741 Q8N2B8 174 aa12.46□□□□□ -0.41
VPS26B-206ENST00000531741 FLNCQ14315 2725 aa12.46□□□□□ -0.42
VPS26B-206ENST00000531741 IGLL5B9A064 214 aa12.46□□□□□ -0.42
VPS26B-206ENST00000531741 RNF151Q2KHN1 245 aa12.46□□□□□ -0.42
VPS26B-206ENST00000531741 MORN3Q6PF18 240 aaPredicted RBP12.46□□□□□ -0.42
VPS26B-206ENST00000531741 MAPK1IP1LQ8NDC0 245 aa12.46□□□□□ -0.42
VPS26B-206ENST00000531741 PCP4P48539 62 aa12.45□□□□□ -0.42
VPS26B-206ENST00000531741 HERVK_113P61574 105 aa12.45□□□□□ -0.42
VPS26B-206ENST00000531741 FAM74A4Q5TZK3 123 aa12.45□□□□□ -0.42
VPS26B-206ENST00000531741 TRAV2A0A0B4J234 112 aa12.44□□□□□ -0.42
VPS26B-206ENST00000531741 C11orf86A6NJI1 115 aa12.44□□□□□ -0.42
VPS26B-206ENST00000531741 RPL39P62891 51 aaKnown RBP12.44□□□□□ -0.42
VPS26B-206ENST00000531741 ZNF56Q15929 161 aa12.44□□□□□ -0.42
VPS26B-206ENST00000531741 TCTEX1D4Q5JR98 221 aa12.44□□□□□ -0.42
VPS26B-206ENST00000531741 EDA2RQ9HAV5 297 aa12.44□□□□□ -0.42
VPS26B-206ENST00000531741 AGRNO00468 2067 aa12.44□□□□□ -0.42
VPS26B-206ENST00000531741 ZNF815PA8K554 130 aa12.44□□□□□ -0.42
VPS26B-206ENST00000531741 HOXA3O43365 443 aaPredicted RBP12.44□□□□□ -0.42
VPS26B-206ENST00000531741 ZNF876PQ49A33 203 aa12.44□□□□□ -0.42
VPS26B-206ENST00000531741 BEX4Q9NWD9 120 aaPredicted RBP12.44□□□□□ -0.42
VPS26B-206ENST00000531741 CELSR2Q9HCU4 2923 aa12.44□□□□□ -0.42
VPS26B-206ENST00000531741 LRRC75A-AS1Q8N1F1 130 aa12.42□□□□□ -0.42
VPS26B-206ENST00000531741 ZNF479Q96JC4 524 aa12.42□□□□□ -0.42
VPS26B-206ENST00000531741 CR1P17927 2039 aa12.42□□□□□ -0.42
VPS26B-206ENST00000531741 DUX5Q96PT3 197 aa12.42□□□□□ -0.42
VPS26B-206ENST00000531741 VPS25Q9BRG1 176 aa12.42□□□□□ -0.42
VPS26B-206ENST00000531741 PRRC2AP48634 2157 aaKnown RBP12.41□□□□□ -0.42
VPS26B-206ENST00000531741 SCGB2A2Q13296 93 aa12.41□□□□□ -0.42
VPS26B-206ENST00000531741 SAP30O75446 220 aa12.41□□□□□ -0.42
VPS26B-206ENST00000531741 RRN3P1Q2M238 152 aa12.41□□□□□ -0.42
VPS26B-206ENST00000531741 Q5PR19 223 aa12.41□□□□□ -0.42
VPS26B-206ENST00000531741 PIK3CD-AS1Q5SR53 167 aa12.41□□□□□ -0.42
VPS26B-206ENST00000531741 TMEM238LA0A1B0GVL6 79 aa12.4□□□□□ -0.42
VPS26B-206ENST00000531741 A6NJY4 79 aa12.4□□□□□ -0.42
VPS26B-206ENST00000531741 G3V4G9 280 aa12.4□□□□□ -0.42
VPS26B-206ENST00000531741 I3L3M4 83 aa12.4□□□□□ -0.42
VPS26B-206ENST00000531741 CD300EQ496F6 205 aaPredicted RBP12.4□□□□□ -0.42
VPS26B-206ENST00000531741 NFE4Q86UQ8 179 aa12.4□□□□□ -0.42
VPS26B-206ENST00000531741 ANKRD17O75179 2603 aaKnown RBP12.39□□□□□ -0.43
VPS26B-206ENST00000531741 DEFB113Q30KQ7 82 aa12.39□□□□□ -0.43
VPS26B-206ENST00000531741 SCGB1D4Q6XE38 83 aa12.39□□□□□ -0.43
VPS26B-206ENST00000531741 SPAG8Q99932 426 aaPredicted RBP12.39□□□□□ -0.43
VPS26B-206ENST00000531741 PRB1P04280 392 aa12.39□□□□□ -0.43
VPS26B-206ENST00000531741 RBMY1A1P0DJD3 496 aaKnown RBP12.39□□□□□ -0.43
VPS26B-206ENST00000531741 RBMY1CP0DJD4 496 aa12.39□□□□□ -0.43
VPS26B-206ENST00000531741 SLURP1P55000 103 aa12.39□□□□□ -0.43
VPS26B-206ENST00000531741 RBMY1FQ15415 496 aaKnown RBP12.39□□□□□ -0.43
VPS26B-206ENST00000531741 C20orf203Q8NBC4 194 aa12.39□□□□□ -0.43
VPS26B-206ENST00000531741 PEMTQ9UBM1 199 aa12.39□□□□□ -0.43
VPS26B-206ENST00000531741 H3BMM0 161 aa12.38□□□□□ -0.43
VPS26B-206ENST00000531741 P0DMU3 169 aa12.38□□□□□ -0.43
VPS26B-206ENST00000531741 FAM231AP0DMU4 169 aa12.38□□□□□ -0.43
VPS26B-206ENST00000531741 FAM231CP0DMU5 169 aa12.38□□□□□ -0.43
VPS26B-206ENST00000531741 ZNRF2Q8NHG8 242 aa12.38□□□□□ -0.43
VPS26B-206ENST00000531741 C4orf3Q8WVX3 66 aa12.38□□□□□ -0.43
VPS26B-206ENST00000531741 PTH2Q96A98 100 aa12.38□□□□□ -0.43
VPS26B-206ENST00000531741 PLEKHB2Q96CS7 222 aa12.38□□□□□ -0.43
VPS26B-206ENST00000531741 SPANXB1Q9NS25 103 aaPredicted RBP12.38□□□□□ -0.43
VPS26B-206ENST00000531741 KNCNA6PVL3 124 aa12.37□□□□□ -0.43
VPS26B-206ENST00000531741 F8W1H4 67 aa12.37□□□□□ -0.43
VPS26B-206ENST00000531741 UBE2D1P51668 147 aa12.37□□□□□ -0.43
VPS26B-206ENST00000531741 DEFB131AP59861 70 aa12.37□□□□□ -0.43
VPS26B-206ENST00000531741 KLHL30-AS1Q8NEE0 82 aa12.37□□□□□ -0.43
VPS26B-206ENST00000531741 A0A0J9YY99 117 aa12.36□□□□□ -0.43
VPS26B-206ENST00000531741 EMP1P54849 157 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms