RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 LINC00612Q8N6U2 182 aa13.54□□□□□ -0.24
SMPD1-205ENST00000531303 POM121L12Q8N7R1 296 aa13.54□□□□□ -0.24
SMPD1-205ENST00000531303 OR4C5Q8NGB2 326 aa13.54□□□□□ -0.24
SMPD1-205ENST00000531303 U3KQK5 164 aa13.54□□□□□ -0.24
SMPD1-205ENST00000531303 TRBV24-1A0A075B6N3 115 aa13.53□□□□□ -0.24
SMPD1-205ENST00000531303 A0A1B0GW15 77 aa13.53□□□□□ -0.24
SMPD1-205ENST00000531303 A8MWV9 139 aa13.53□□□□□ -0.24
SMPD1-205ENST00000531303 RS1O15537 224 aa13.53□□□□□ -0.24
SMPD1-205ENST00000531303 MGPP08493 103 aa13.53□□□□□ -0.24
SMPD1-205ENST00000531303 C12orf74Q32Q52 190 aa13.53□□□□□ -0.24
SMPD1-205ENST00000531303 PIK3CD-AS1Q5SR53 167 aa13.53□□□□□ -0.24
SMPD1-205ENST00000531303 FBN3Q75N90 2809 aa13.52□□□□□ -0.24
SMPD1-205ENST00000531303 S100A8P05109 93 aa13.52□□□□□ -0.25
SMPD1-205ENST00000531303 NANOS2P60321 138 aaKnown RBP13.52□□□□□ -0.25
SMPD1-205ENST00000531303 C11orf45Q8TAV5 145 aa13.52□□□□□ -0.25
SMPD1-205ENST00000531303 ZNF479Q96JC4 524 aa13.52□□□□□ -0.25
SMPD1-205ENST00000531303 TEX48A0A1B0GUV7 120 aa13.51□□□□□ -0.25
SMPD1-205ENST00000531303 CRYGDP07320 174 aa13.51□□□□□ -0.25
SMPD1-205ENST00000531303 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.51□□□□□ -0.25
SMPD1-205ENST00000531303 TRAV4A0A0B4J268 109 aa13.5□□□□□ -0.25
SMPD1-205ENST00000531303 COLCA2A8K830 154 aa13.5□□□□□ -0.25
SMPD1-205ENST00000531303 F5H697 171 aa13.5□□□□□ -0.25
SMPD1-205ENST00000531303 HTN3P15516 51 aa13.5□□□□□ -0.25
SMPD1-205ENST00000531303 AMN1Q8IY45 258 aa13.5□□□□□ -0.25
SMPD1-205ENST00000531303 NDUFAF3Q9BU61 184 aa13.5□□□□□ -0.25
SMPD1-205ENST00000531303 TMEM191AQ9H0A3 160 aa13.5□□□□□ -0.25
SMPD1-205ENST00000531303 DPH3P1Q9H4G8 78 aa13.5□□□□□ -0.25
SMPD1-205ENST00000531303 STAB2Q8WWQ8 2551 aa13.5□□□□□ -0.25
SMPD1-205ENST00000531303 TMEM136Q6ZRR5 245 aa13.49□□□□□ -0.25
SMPD1-205ENST00000531303 KIF25-AS1Q9Y6Z4 181 aa13.49□□□□□ -0.25
SMPD1-205ENST00000531303 ZNF56Q15929 161 aa13.48□□□□□ -0.25
SMPD1-205ENST00000531303 RASL11AQ6T310 242 aa13.48□□□□□ -0.25
SMPD1-205ENST00000531303 TRGV4A0A0C4DH28 118 aa13.48□□□□□ -0.25
SMPD1-205ENST00000531303 Q6ZTC4 211 aa13.48□□□□□ -0.25
SMPD1-205ENST00000531303 LINC00315P59091 139 aa13.47□□□□□ -0.25
SMPD1-205ENST00000531303 Q6ZSN1 163 aa13.47□□□□□ -0.25
SMPD1-205ENST00000531303 FRZBQ92765 325 aa13.47□□□□□ -0.25
SMPD1-205ENST00000531303 GNB1LQ9BYB4 327 aa13.47□□□□□ -0.25
SMPD1-205ENST00000531303 TRAV26-2A0A0B4J265 109 aa13.46□□□□□ -0.25
SMPD1-205ENST00000531303 RHODO00212 210 aa13.46□□□□□ -0.25
SMPD1-205ENST00000531303 ATP5G1P05496 136 aa13.46□□□□□ -0.25
SMPD1-205ENST00000531303 RAB4AP20338 218 aa13.46□□□□□ -0.25
SMPD1-205ENST00000531303 RAB5AP20339 215 aa13.46□□□□□ -0.25
SMPD1-205ENST00000531303 RPS10P46783 165 aaKnown RBP13.46□□□□□ -0.25
SMPD1-205ENST00000531303 FAM104BQ5XKR9 115 aa13.46□□□□□ -0.25
SMPD1-205ENST00000531303 UFSP1Q6NVU6 142 aa13.46□□□□□ -0.25
SMPD1-205ENST00000531303 GATD1Q8NB37 220 aa13.46□□□□□ -0.25
SMPD1-205ENST00000531303 RNF185Q96GF1 192 aa13.46□□□□□ -0.25
SMPD1-205ENST00000531303 C18orf15Q96N68 181 aa13.46□□□□□ -0.25
SMPD1-205ENST00000531303 TRAPPC1Q9Y5R8 145 aa13.46□□□□□ -0.25
SMPD1-205ENST00000531303 F5H768 121 aa13.45□□□□□ -0.26
SMPD1-205ENST00000531303 HOXA5P20719 270 aa13.45□□□□□ -0.26
SMPD1-205ENST00000531303 SLAQ13239 276 aa13.45□□□□□ -0.26
SMPD1-205ENST00000531303 COX19Q49B96 90 aa13.45□□□□□ -0.26
SMPD1-205ENST00000531303 ZFP2Q6ZN57 461 aa13.45□□□□□ -0.26
SMPD1-205ENST00000531303 MRPL18Q9H0U6 180 aaKnown RBP13.45□□□□□ -0.26
SMPD1-205ENST00000531303 EDA2RQ9HAV5 297 aa13.45□□□□□ -0.26
SMPD1-205ENST00000531303 HLA-DQA1P01909 254 aa13.44□□□□□ -0.26
SMPD1-205ENST00000531303 APCSP02743 223 aa13.44□□□□□ -0.26
SMPD1-205ENST00000531303 FABP9Q0Z7S8 132 aa13.44□□□□□ -0.26
SMPD1-205ENST00000531303 FHL2Q14192 279 aa13.44□□□□□ -0.26
SMPD1-205ENST00000531303 KIAA1644Q3SXP7 199 aa13.44□□□□□ -0.26
SMPD1-205ENST00000531303 MRPL51Q4U2R6 128 aaKnown RBP13.44□□□□□ -0.26
SMPD1-205ENST00000531303 SMKR1H3BMG3 65 aa13.43□□□□□ -0.26
SMPD1-205ENST00000531303 NCR2O95944 276 aa13.43□□□□□ -0.26
SMPD1-205ENST00000531303 SUMO4Q6EEV6 95 aa13.43□□□□□ -0.26
SMPD1-205ENST00000531303 GAS8-AS1O95177 125 aa13.42□□□□□ -0.26
SMPD1-205ENST00000531303 MT-ND6P03923 174 aa13.42□□□□□ -0.26
SMPD1-205ENST00000531303 P0DMU3 169 aa13.42□□□□□ -0.26
SMPD1-205ENST00000531303 FAM231AP0DMU4 169 aa13.42□□□□□ -0.26
SMPD1-205ENST00000531303 FAM231CP0DMU5 169 aa13.42□□□□□ -0.26
SMPD1-205ENST00000531303 GATA1P15976 413 aaPredicted RBP13.42□□□□□ -0.26
SMPD1-205ENST00000531303 DEFB131BA0A096LNP1 70 aa13.41□□□□□ -0.26
SMPD1-205ENST00000531303 CIDEAO60543 219 aa13.41□□□□□ -0.26
SMPD1-205ENST00000531303 CKS2P33552 79 aa13.41□□□□□ -0.26
SMPD1-205ENST00000531303 HHLA3Q9XRX5 114 aa13.41□□□□□ -0.26
SMPD1-205ENST00000531303 TGP01266 2768 aa13.4□□□□□ -0.26
SMPD1-205ENST00000531303 A0A0J9YY99 117 aa13.4□□□□□ -0.26
SMPD1-205ENST00000531303 D6R8Y8 96 aa13.4□□□□□ -0.26
SMPD1-205ENST00000531303 SLC25A29Q8N8R3 303 aa13.4□□□□□ -0.26
SMPD1-205ENST00000531303 Q9UF83 564 aa13.4□□□□□ -0.26
SMPD1-205ENST00000531303 TRGC2P03986 189 aa13.39□□□□□ -0.27
SMPD1-205ENST00000531303 MRAP2Q96G30 205 aa13.39□□□□□ -0.27
SMPD1-205ENST00000531303 K7EQD1 137 aa13.38□□□□□ -0.27
SMPD1-205ENST00000531303 M0QY20 66 aa13.38□□□□□ -0.27
SMPD1-205ENST00000531303 RPL39LQ96EH5 51 aaKnown RBP13.38□□□□□ -0.27
SMPD1-205ENST00000531303 TRAV26-1A0A087WT03 109 aa13.37□□□□□ -0.27
SMPD1-205ENST00000531303 TRAV10A0A0B4J240 114 aa13.37□□□□□ -0.27
SMPD1-205ENST00000531303 LOC100131303A0A0U1RQF7 123 aa13.37□□□□□ -0.27
SMPD1-205ENST00000531303 PAX4O43316 350 aa13.37□□□□□ -0.27
SMPD1-205ENST00000531303 CRYBA4P53673 196 aa13.37□□□□□ -0.27
SMPD1-205ENST00000531303 PRO0255Q9UI72 69 aa13.37□□□□□ -0.27
SMPD1-205ENST00000531303 TRBV6-4A0A1B0GX49 114 aa13.36□□□□□ -0.27
SMPD1-205ENST00000531303 H7C1H1 209 aa13.36□□□□□ -0.27
SMPD1-205ENST00000531303 ORMDL3Q8N138 153 aa13.36□□□□□ -0.27
SMPD1-205ENST00000531303 PHLDA1Q8WV24 401 aaPredicted RBP13.36□□□□□ -0.27
SMPD1-205ENST00000531303 PRELID3AQ96N28 172 aa13.36□□□□□ -0.27
SMPD1-205ENST00000531303 PRADC1Q9BSG0 188 aa13.36□□□□□ -0.27
SMPD1-205ENST00000531303 RHOHQ15669 191 aa13.36□□□□□ -0.27
SMPD1-205ENST00000531303 OR10J3Q5JRS4 329 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms