RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 DYNC1H1Q14204 4646 aaKnown RBP12.91□□□□□ -0.34
UBXN1-211ENST00000531056 SRP19P09132 144 aaKnown RBP12.91□□□□□ -0.34
UBXN1-211ENST00000531056 LINC00694P0DN24 101 aa12.91□□□□□ -0.34
UBXN1-211ENST00000531056 MED14OSP0DP75 135 aa12.91□□□□□ -0.34
UBXN1-211ENST00000531056 Q6ZRN7 208 aaPredicted RBP12.91□□□□□ -0.34
UBXN1-211ENST00000531056 PHLDA3Q9Y5J5 127 aa12.91□□□□□ -0.34
UBXN1-211ENST00000531056 LY96Q9Y6Y9 160 aa12.91□□□□□ -0.34
UBXN1-211ENST00000531056 DNAH10OSP0CZ25 163 aa12.9□□□□□ -0.34
UBXN1-211ENST00000531056 SFRP2Q96HF1 295 aa12.9□□□□□ -0.34
UBXN1-211ENST00000531056 TRBV20OR9-2A0A075B6H5 130 aa12.89□□□□□ -0.35
UBXN1-211ENST00000531056 RHODO00212 210 aa12.89□□□□□ -0.35
UBXN1-211ENST00000531056 IGLV2-8P01709 118 aa12.89□□□□□ -0.35
UBXN1-211ENST00000531056 PRR27Q6MZM9 219 aa12.89□□□□□ -0.35
UBXN1-211ENST00000531056 ZFP82Q8N141 532 aa12.89□□□□□ -0.35
UBXN1-211ENST00000531056 BIN3Q9NQY0 253 aa12.89□□□□□ -0.35
UBXN1-211ENST00000531056 M0R381 172 aa12.88□□□□□ -0.35
UBXN1-211ENST00000531056 C14orf178Q8N769 122 aaPredicted RBP12.88□□□□□ -0.35
UBXN1-211ENST00000531056 ZNF727A8MUV8 499 aa12.87□□□□□ -0.35
UBXN1-211ENST00000531056 K7EP13 123 aa12.87□□□□□ -0.35
UBXN1-211ENST00000531056 SNAI2O43623 268 aa12.87□□□□□ -0.35
UBXN1-211ENST00000531056 CRYGDP07320 174 aa12.87□□□□□ -0.35
UBXN1-211ENST00000531056 SRSF3P84103 164 aaKnown RBP12.87□□□□□ -0.35
UBXN1-211ENST00000531056 FAM74A4Q5TZK3 123 aa12.87□□□□□ -0.35
UBXN1-211ENST00000531056 ATP6V0E2Q8NHE4 81 aa12.87□□□□□ -0.35
UBXN1-211ENST00000531056 SMIM7Q9BQ49 75 aa12.87□□□□□ -0.35
UBXN1-211ENST00000531056 Q9UF83 564 aa12.87□□□□□ -0.35
UBXN1-211ENST00000531056 HERC2O95714 4834 aa12.87□□□□□ -0.35
UBXN1-211ENST00000531056 TRAV9-2A0A087WT02 112 aa12.86□□□□□ -0.35
UBXN1-211ENST00000531056 A0A087WWL8 130 aa12.86□□□□□ -0.35
UBXN1-211ENST00000531056 EVI2AP22794 236 aa12.86□□□□□ -0.35
UBXN1-211ENST00000531056 OR10AG1Q8NH19 301 aa12.86□□□□□ -0.35
UBXN1-211ENST00000531056 SSBP4Q9BWG4 385 aaPredicted RBP12.86□□□□□ -0.35
UBXN1-211ENST00000531056 GTSF1LQ9H1H1 148 aa12.86□□□□□ -0.35
UBXN1-211ENST00000531056 TNFRSF18Q9Y5U5 241 aa12.86□□□□□ -0.35
UBXN1-211ENST00000531056 GAGE12JA6NER3 117 aa12.85□□□□□ -0.35
UBXN1-211ENST00000531056 C9JQL5 133 aa12.85□□□□□ -0.35
UBXN1-211ENST00000531056 OR5AL1P0C617 328 aa12.85□□□□□ -0.35
UBXN1-211ENST00000531056 GAGE1Q13065 139 aa12.85□□□□□ -0.35
UBXN1-211ENST00000531056 GAGE4Q13068 117 aa12.85□□□□□ -0.35
UBXN1-211ENST00000531056 GAGE5Q13069 117 aa12.85□□□□□ -0.35
UBXN1-211ENST00000531056 GAGE13Q4V321 117 aa12.85□□□□□ -0.35
UBXN1-211ENST00000531056 FAM74A3Q4VXF1 159 aa12.85□□□□□ -0.35
UBXN1-211ENST00000531056 LELP1Q5T871 98 aa12.85□□□□□ -0.35
UBXN1-211ENST00000531056 DAZAP1Q96EP5 407 aaKnown RBP12.85□□□□□ -0.35
UBXN1-211ENST00000531056 IGHV3-38A0A0C4DH36 116 aa12.84□□□□□ -0.35
UBXN1-211ENST00000531056 C19orf71A6NCJ1 209 aa12.84□□□□□ -0.35
UBXN1-211ENST00000531056 LINC01556Q5JQF7 62 aa12.84□□□□□ -0.35
UBXN1-211ENST00000531056 OCC1Q8TAD7 63 aa12.84□□□□□ -0.35
UBXN1-211ENST00000531056 KIAA1109Q2LD37 5005 aa12.84□□□□□ -0.35
UBXN1-211ENST00000531056 TRAV8-6A0A0B4J262 113 aa12.83□□□□□ -0.36
UBXN1-211ENST00000531056 OR10J3Q5JRS4 329 aa12.83□□□□□ -0.36
UBXN1-211ENST00000531056 NFE4Q86UQ8 179 aa12.83□□□□□ -0.36
UBXN1-211ENST00000531056 C10orf126Q8N4M7 172 aa12.83□□□□□ -0.36
UBXN1-211ENST00000531056 MSRB1Q9NZV6 116 aa12.83□□□□□ -0.36
UBXN1-211ENST00000531056 C16orf90A8MZG2 172 aa12.81□□□□□ -0.36
UBXN1-211ENST00000531056 UQCC3Q6UW78 93 aa12.81□□□□□ -0.36
UBXN1-211ENST00000531056 SPATA12Q7Z6I5 190 aa12.81□□□□□ -0.36
UBXN1-211ENST00000531056 MUC21A0A0G2JKD1 596 aa12.8□□□□□ -0.36
UBXN1-211ENST00000531056 MUC21A0A140T8X8 626 aa12.8□□□□□ -0.36
UBXN1-211ENST00000531056 K7EN84 100 aa12.8□□□□□ -0.36
UBXN1-211ENST00000531056 P01737 135 aa12.8□□□□□ -0.36
UBXN1-211ENST00000531056 IGLC6P0CF74 106 aa12.8□□□□□ -0.36
UBXN1-211ENST00000531056 KRTAP10-2P60368 255 aa12.8□□□□□ -0.36
UBXN1-211ENST00000531056 TMEM241Q24JQ0 296 aa12.8□□□□□ -0.36
UBXN1-211ENST00000531056 TRBV10-1A0A0K0K1A3 114 aa12.79□□□□□ -0.36
UBXN1-211ENST00000531056 GZMBP10144 247 aa12.79□□□□□ -0.36
UBXN1-211ENST00000531056 RPS20P60866 119 aaKnown RBP12.79□□□□□ -0.36
UBXN1-211ENST00000531056 SPANXN1Q5VSR9 72 aa12.79□□□□□ -0.36
UBXN1-211ENST00000531056 LINC01551Q86U37 167 aa12.79□□□□□ -0.36
UBXN1-211ENST00000531056 COMMD7Q86VX2 200 aa12.79□□□□□ -0.36
UBXN1-211ENST00000531056 OR2D3Q8NGH3 330 aa12.79□□□□□ -0.36
UBXN1-211ENST00000531056 NAT8Q9UHE5 227 aa12.79□□□□□ -0.36
UBXN1-211ENST00000531056 LINC00862A6NCI5 91 aa12.78□□□□□ -0.36
UBXN1-211ENST00000531056 IBA57-AS1B1ANH7 110 aa12.78□□□□□ -0.36
UBXN1-211ENST00000531056 RAB4BP61018 213 aa12.78□□□□□ -0.36
UBXN1-211ENST00000531056 XKRY2A2RUG3 117 aa12.77□□□□□ -0.37
UBXN1-211ENST00000531056 IGHV3-30P01768 117 aa12.77□□□□□ -0.37
UBXN1-211ENST00000531056 IGHV3-33P01772 117 aa12.77□□□□□ -0.37
UBXN1-211ENST00000531056 IGHV3-30-3P0DP02 117 aa12.77□□□□□ -0.37
UBXN1-211ENST00000531056 IGHV3-30-5P0DP03 117 aa12.77□□□□□ -0.37
UBXN1-211ENST00000531056 ZNF56Q15929 161 aa12.77□□□□□ -0.37
UBXN1-211ENST00000531056 FAM231DQ6ZW35 169 aa12.77□□□□□ -0.37
UBXN1-211ENST00000531056 FER1L6-AS1Q8NA97 138 aa12.77□□□□□ -0.37
UBXN1-211ENST00000531056 NUDT10Q8NFP7 164 aa12.77□□□□□ -0.37
UBXN1-211ENST00000531056 OR10G8Q8NGN5 311 aa12.77□□□□□ -0.37
UBXN1-211ENST00000531056 NUDT11Q96G61 164 aa12.77□□□□□ -0.37
UBXN1-211ENST00000531056 RNASE7Q9H1E1 156 aaKnown RBP12.77□□□□□ -0.37
UBXN1-211ENST00000531056 KIF25-AS1Q9Y6Z4 181 aa12.77□□□□□ -0.37
UBXN1-211ENST00000531056 A0A087WWC5 75 aa12.76□□□□□ -0.37
UBXN1-211ENST00000531056 ERVFC1-1P60608 527 aa12.76□□□□□ -0.37
UBXN1-211ENST00000531056 UBE2D3P61077 147 aa12.76□□□□□ -0.37
UBXN1-211ENST00000531056 UBE2D2P62837 147 aa12.76□□□□□ -0.37
UBXN1-211ENST00000531056 Q8N3U1 123 aa12.76□□□□□ -0.37
UBXN1-211ENST00000531056 RPP21Q9H633 154 aaKnown RBP12.76□□□□□ -0.37
UBXN1-211ENST00000531056 LRP1BQ9NZR2 4599 aa12.75□□□□□ -0.37
UBXN1-211ENST00000531056 TRBV7-3A0A075B6L6 115 aa12.75□□□□□ -0.37
UBXN1-211ENST00000531056 SSTP61278 116 aa12.75□□□□□ -0.37
UBXN1-211ENST00000531056 RPL23P62829 140 aaKnown RBP12.75□□□□□ -0.37
UBXN1-211ENST00000531056 RPL36AP83881 106 aaKnown RBP12.75□□□□□ -0.37
UBXN1-211ENST00000531056 ADIRFQ15847 76 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms