RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 M0R036 132 aa10.48□□□□□ -0.73
CPSF1-205ENST00000531042 SH2D1AO60880 128 aa10.48□□□□□ -0.73
CPSF1-205ENST00000531042 DAZ4Q86SG3 579 aaKnown RBP10.48□□□□□ -0.73
CPSF1-205ENST00000531042 SYT8Q8NBV8 401 aa10.48□□□□□ -0.73
CPSF1-205ENST00000531042 FMC1Q96HJ9 113 aa10.48□□□□□ -0.73
CPSF1-205ENST00000531042 MAP1LC3BQ9GZQ8 125 aa10.48□□□□□ -0.73
CPSF1-205ENST00000531042 DAZ3Q9NR90 486 aaKnown RBP10.48□□□□□ -0.73
CPSF1-205ENST00000531042 CYTL1Q9NRR1 136 aa10.48□□□□□ -0.73
CPSF1-205ENST00000531042 DNAH8Q96JB1 4490 aa10.47□□□□□ -0.73
CPSF1-205ENST00000531042 A0A087WWC5 75 aa10.47□□□□□ -0.73
CPSF1-205ENST00000531042 TRAV8-3A0A0A6YYJ7 113 aa10.47□□□□□ -0.73
CPSF1-205ENST00000531042 FAM229AH3BQW9 127 aa10.47□□□□□ -0.73
CPSF1-205ENST00000531042 RHODO00212 210 aa10.47□□□□□ -0.73
CPSF1-205ENST00000531042 ATP6V1G1O75348 118 aa10.47□□□□□ -0.73
CPSF1-205ENST00000531042 UBE2G1P62253 170 aa10.47□□□□□ -0.73
CPSF1-205ENST00000531042 WFDC2Q14508 124 aa10.47□□□□□ -0.73
CPSF1-205ENST00000531042 FAM162BQ5T6X4 162 aa10.47□□□□□ -0.73
CPSF1-205ENST00000531042 MYCBP2O75592 4640 aa10.46□□□□□ -0.73
CPSF1-205ENST00000531042 TRBV6-1A0A0K0K1D8 114 aa10.46□□□□□ -0.73
CPSF1-205ENST00000531042 ARPC5O15511 151 aa10.46□□□□□ -0.73
CPSF1-205ENST00000531042 FHITP49789 147 aa10.46□□□□□ -0.73
CPSF1-205ENST00000531042 ZNF674Q2M3X9 581 aa10.46□□□□□ -0.73
CPSF1-205ENST00000531042 TOR2AQ5JU69 321 aa10.46□□□□□ -0.73
CPSF1-205ENST00000531042 FAM74A4Q5TZK3 123 aa10.46□□□□□ -0.73
CPSF1-205ENST00000531042 SFRP2Q96HF1 295 aa10.46□□□□□ -0.73
CPSF1-205ENST00000531042 FAM30AQ9NZY2 134 aa10.46□□□□□ -0.73
CPSF1-205ENST00000531042 LTAP01374 205 aa10.45□□□□□ -0.74
CPSF1-205ENST00000531042 ZNF345Q14585 488 aa10.45□□□□□ -0.74
CPSF1-205ENST00000531042 LINC01559Q495D7 138 aa10.45□□□□□ -0.74
CPSF1-205ENST00000531042 TCEAL7Q9BRU2 100 aa10.45□□□□□ -0.74
CPSF1-205ENST00000531042 PHLDA3Q9Y5J5 127 aa10.45□□□□□ -0.74
CPSF1-205ENST00000531042 DMBT1Q9UGM3 2413 aaPredicted RBP10.45□□□□□ -0.74
CPSF1-205ENST00000531042 A0A087WWL8 130 aa10.44□□□□□ -0.74
CPSF1-205ENST00000531042 TMSB15BA0A087X1C1 80 aa10.44□□□□□ -0.74
CPSF1-205ENST00000531042 TPT1P13693 172 aaKnown RBP10.44□□□□□ -0.74
CPSF1-205ENST00000531042 CST9LP1Q5W188 147 aa10.44□□□□□ -0.74
CPSF1-205ENST00000531042 STOML3Q8TAV4 291 aa10.44□□□□□ -0.74
CPSF1-205ENST00000531042 A0A0D9SG52 128 aa10.43□□□□□ -0.74
CPSF1-205ENST00000531042 M0R381 172 aa10.43□□□□□ -0.74
CPSF1-205ENST00000531042 LECT2O14960 151 aa10.43□□□□□ -0.74
CPSF1-205ENST00000531042 TEX261Q6UWH6 196 aa10.43□□□□□ -0.74
CPSF1-205ENST00000531042 NIT1Q86X76 327 aa10.43□□□□□ -0.74
CPSF1-205ENST00000531042 AKR1C3P42330 323 aa10.42□□□□□ -0.74
CPSF1-205ENST00000531042 TMUB2Q71RG4 321 aa10.42□□□□□ -0.74
CPSF1-205ENST00000531042 ZFP82Q8N141 532 aa10.42□□□□□ -0.74
CPSF1-205ENST00000531042 COX11Q9Y6N1 276 aa10.42□□□□□ -0.74
CPSF1-205ENST00000531042 URGCP-MRPS24S4R325 110 aa10.42□□□□□ -0.74
CPSF1-205ENST00000531042 TRBV10-1A0A0K0K1A3 114 aa10.41□□□□□ -0.74
CPSF1-205ENST00000531042 PAGE4O60829 102 aa10.41□□□□□ -0.74
CPSF1-205ENST00000531042 Q6ZSA8 131 aa10.41□□□□□ -0.74
CPSF1-205ENST00000531042 KCNRGQ8N5I3 272 aa10.41□□□□□ -0.74
CPSF1-205ENST00000531042 BAALCQ8WXS3 180 aa10.41□□□□□ -0.74
CPSF1-205ENST00000531042 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.4□□□□□ -0.74
CPSF1-205ENST00000531042 SEC11BP0C7V7 166 aa10.4□□□□□ -0.74
CPSF1-205ENST00000531042 RPL36AP83881 106 aaKnown RBP10.4□□□□□ -0.74
CPSF1-205ENST00000531042 SLC51BQ86UW2 128 aa10.4□□□□□ -0.74
CPSF1-205ENST00000531042 RPL36ALQ969Q0 106 aaKnown RBP10.4□□□□□ -0.74
CPSF1-205ENST00000531042 RMI2Q96E14 147 aa10.4□□□□□ -0.74
CPSF1-205ENST00000531042 DNAJC30Q96LL9 226 aa10.4□□□□□ -0.74
CPSF1-205ENST00000531042 KLK12Q9UKR0 248 aa10.4□□□□□ -0.74
CPSF1-205ENST00000531042 FLG2Q5D862 2391 aaPredicted RBP10.4□□□□□ -0.74
CPSF1-205ENST00000531042 TRBV7-3A0A075B6L6 115 aa10.39□□□□□ -0.75
CPSF1-205ENST00000531042 S100A9P06702 114 aaKnown RBP10.39□□□□□ -0.75
CPSF1-205ENST00000531042 UBE2D3P61077 147 aa10.39□□□□□ -0.75
CPSF1-205ENST00000531042 UBE2D2P62837 147 aa10.39□□□□□ -0.75
CPSF1-205ENST00000531042 SFT2D1Q8WV19 159 aa10.39□□□□□ -0.75
CPSF1-205ENST00000531042 MBD3L1Q8WWY6 194 aa10.39□□□□□ -0.75
CPSF1-205ENST00000531042 FAM210AQ96ND0 272 aa10.39□□□□□ -0.75
CPSF1-205ENST00000531042 CHCHD7Q9BUK0 85 aa10.39□□□□□ -0.75
CPSF1-205ENST00000531042 IGKV2D-24A0A075B6R9 120 aa10.38□□□□□ -0.75
CPSF1-205ENST00000531042 A0A087WX48 190 aa10.38□□□□□ -0.75
CPSF1-205ENST00000531042 BCL2L11O43521 198 aa10.38□□□□□ -0.75
CPSF1-205ENST00000531042 OR10G8Q8NGN5 311 aa10.38□□□□□ -0.75
CPSF1-205ENST00000531042 FAM213BQ8TBF2 198 aa10.38□□□□□ -0.75
CPSF1-205ENST00000531042 MLST8Q9BVC4 326 aa10.38□□□□□ -0.75
CPSF1-205ENST00000531042 SCO2A0A1W2PP80 73 aa10.37□□□□□ -0.75
CPSF1-205ENST00000531042 KANTRA0A1W2PQU2 76 aa10.37□□□□□ -0.75
CPSF1-205ENST00000531042 UMAD1C9J7I0 102 aa10.37□□□□□ -0.75
CPSF1-205ENST00000531042 CXCL1P09341 107 aa10.37□□□□□ -0.75
CPSF1-205ENST00000531042 S100A1P23297 94 aa10.37□□□□□ -0.75
CPSF1-205ENST00000531042 RAB4BP61018 213 aa10.37□□□□□ -0.75
CPSF1-205ENST00000531042 RPL19P84098 196 aaKnown RBP10.37□□□□□ -0.75
CPSF1-205ENST00000531042 ELOBQ15370 118 aa10.37□□□□□ -0.75
CPSF1-205ENST00000531042 Q8N976 141 aa10.37□□□□□ -0.75
CPSF1-205ENST00000531042 OR10AG1Q8NH19 301 aa10.37□□□□□ -0.75
CPSF1-205ENST00000531042 UBE2WQ96B02 151 aa10.37□□□□□ -0.75
CPSF1-205ENST00000531042 A0A1B0GV50 99 aa10.36□□□□□ -0.75
CPSF1-205ENST00000531042 LINC01620Q4KN68 170 aa10.36□□□□□ -0.75
CPSF1-205ENST00000531042 CLLU1Q5K131 121 aa10.36□□□□□ -0.75
CPSF1-205ENST00000531042 KCNIP4Q6PIL6 250 aa10.36□□□□□ -0.75
CPSF1-205ENST00000531042 ATRAIDQ6UW56 229 aa10.36□□□□□ -0.75
CPSF1-205ENST00000531042 BAGE2Q86Y30 109 aa10.36□□□□□ -0.75
CPSF1-205ENST00000531042 RBFOX3A6NFN3 312 aa10.35□□□□□ -0.75
CPSF1-205ENST00000531042 SNAI2O43623 268 aa10.35□□□□□ -0.75
CPSF1-205ENST00000531042 RAB14P61106 215 aa10.35□□□□□ -0.75
CPSF1-205ENST00000531042 PRR27Q6MZM9 219 aa10.35□□□□□ -0.75
CPSF1-205ENST00000531042 NEXN-AS1Q8NBZ9 246 aa10.35□□□□□ -0.75
CPSF1-205ENST00000531042 SSBP4Q9BWG4 385 aaPredicted RBP10.35□□□□□ -0.75
CPSF1-205ENST00000531042 ZNF471Q9BX82 626 aaPredicted RBP10.35□□□□□ -0.75
CPSF1-205ENST00000531042 TRBV6-8A0A0A6YYG3 113 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms