RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 MSRB1Q9NZV6 116 aa11.89□□□□□ -0.51
SF3B2-211ENST00000531041 A0A1B0GUT8 65 aa11.88□□□□□ -0.51
SF3B2-211ENST00000531041 RHODO00212 210 aa11.88□□□□□ -0.51
SF3B2-211ENST00000531041 RHEBQ15382 184 aa11.88□□□□□ -0.51
SF3B2-211ENST00000531041 BORCS7Q96B45 105 aa11.88□□□□□ -0.51
SF3B2-211ENST00000531041 AP1S3Q96PC3 154 aa11.88□□□□□ -0.51
SF3B2-211ENST00000531041 PRO0255Q9UI72 69 aa11.88□□□□□ -0.51
SF3B2-211ENST00000531041 HHLA3Q9XRX5 114 aa11.88□□□□□ -0.51
SF3B2-211ENST00000531041 TENM2Q9NT68 2774 aa11.88□□□□□ -0.51
SF3B2-211ENST00000531041 C7orf77A4D0Y5 90 aa11.87□□□□□ -0.51
SF3B2-211ENST00000531041 IGLL5B9A064 214 aa11.87□□□□□ -0.51
SF3B2-211ENST00000531041 TRGC1P0CF51 173 aa11.87□□□□□ -0.51
SF3B2-211ENST00000531041 TWIST1Q15672 202 aa11.87□□□□□ -0.51
SF3B2-211ENST00000531041 SVBPQ8N300 66 aa11.87□□□□□ -0.51
SF3B2-211ENST00000531041 TMEM242Q9NWH2 141 aa11.87□□□□□ -0.51
SF3B2-211ENST00000531041 A0A087WWC5 75 aa11.86□□□□□ -0.51
SF3B2-211ENST00000531041 A0A087WWL8 130 aa11.86□□□□□ -0.51
SF3B2-211ENST00000531041 IGHV3-73A0A0B4J1V6 119 aa11.86□□□□□ -0.51
SF3B2-211ENST00000531041 SNAPINO95295 136 aa11.86□□□□□ -0.51
SF3B2-211ENST00000531041 GATA1P15976 413 aaPredicted RBP11.86□□□□□ -0.51
SF3B2-211ENST00000531041 CRYBA4P53673 196 aa11.86□□□□□ -0.51
SF3B2-211ENST00000531041 FAM74A4Q5TZK3 123 aa11.86□□□□□ -0.51
SF3B2-211ENST00000531041 TMEM88Q6PEY1 159 aa11.86□□□□□ -0.51
SF3B2-211ENST00000531041 C14orf178Q8N769 122 aaPredicted RBP11.86□□□□□ -0.51
SF3B2-211ENST00000531041 KIF25-AS1Q9Y6Z4 181 aa11.86□□□□□ -0.51
SF3B2-211ENST00000531041 TRAV26-1A0A087WT03 109 aa11.86□□□□□ -0.51
SF3B2-211ENST00000531041 H3BNG1 76 aa11.86□□□□□ -0.51
SF3B2-211ENST00000531041 TCTAP57738 103 aa11.86□□□□□ -0.51
SF3B2-211ENST00000531041 IMMP2LQ96T52 175 aa11.86□□□□□ -0.51
SF3B2-211ENST00000531041 TRBV6-4A0A1B0GX49 114 aa11.85□□□□□ -0.51
SF3B2-211ENST00000531041 SMIM17P0DL12 118 aa11.85□□□□□ -0.51
SF3B2-211ENST00000531041 EVI2AP22794 236 aa11.85□□□□□ -0.51
SF3B2-211ENST00000531041 RIGQ13278 110 aa11.85□□□□□ -0.51
SF3B2-211ENST00000531041 VSIG2Q96IQ7 327 aa11.85□□□□□ -0.51
SF3B2-211ENST00000531041 PAX4O43316 350 aa11.84□□□□□ -0.51
SF3B2-211ENST00000531041 SLC25A29Q8N8R3 303 aa11.84□□□□□ -0.51
SF3B2-211ENST00000531041 RPS10P5Q9NQ39 176 aa11.84□□□□□ -0.51
SF3B2-211ENST00000531041 A0A0J9YY99 117 aa11.83□□□□□ -0.52
SF3B2-211ENST00000531041 FAM3BP58499 235 aaPredicted RBP11.83□□□□□ -0.52
SF3B2-211ENST00000531041 LINC00315P59091 139 aa11.83□□□□□ -0.52
SF3B2-211ENST00000531041 RAB4BP61018 213 aa11.83□□□□□ -0.52
SF3B2-211ENST00000531041 Q6ZSN1 163 aa11.83□□□□□ -0.52
SF3B2-211ENST00000531041 SMIM15Q7Z3B0 74 aa11.83□□□□□ -0.52
SF3B2-211ENST00000531041 C15orf53Q8NAA6 179 aa11.83□□□□□ -0.52
SF3B2-211ENST00000531041 DPH3P1Q9H4G8 78 aa11.83□□□□□ -0.52
SF3B2-211ENST00000531041 APLNQ9ULZ1 77 aa11.83□□□□□ -0.52
SF3B2-211ENST00000531041 A0A1B0GW15 77 aa11.82□□□□□ -0.52
SF3B2-211ENST00000531041 DYNC2H1Q8NCM8 4307 aaKnown RBP11.81□□□□□ -0.52
SF3B2-211ENST00000531041 RHOHQ15669 191 aa11.81□□□□□ -0.52
SF3B2-211ENST00000531041 ZNF56Q15929 161 aa11.81□□□□□ -0.52
SF3B2-211ENST00000531041 ATP5L2Q7Z4Y8 100 aa11.81□□□□□ -0.52
SF3B2-211ENST00000531041 TMEM191AQ9H0A3 160 aa11.81□□□□□ -0.52
SF3B2-211ENST00000531041 A0A1B0GXF2 115 aa11.8□□□□□ -0.52
SF3B2-211ENST00000531041 K7EQD1 137 aa11.8□□□□□ -0.52
SF3B2-211ENST00000531041 KCNIP4Q6PIL6 250 aa11.8□□□□□ -0.52
SF3B2-211ENST00000531041 PRADC1Q9BSG0 188 aa11.8□□□□□ -0.52
SF3B2-211ENST00000531041 STARD9Q9P2P6 4700 aa11.8□□□□□ -0.52
SF3B2-211ENST00000531041 F5H697 171 aa11.79□□□□□ -0.52
SF3B2-211ENST00000531041 MRPL54Q6P161 138 aaKnown RBP11.79□□□□□ -0.52
SF3B2-211ENST00000531041 BTF3L4Q96K17 158 aa11.79□□□□□ -0.52
SF3B2-211ENST00000531041 TRAV9-1A0A075B6T8 112 aa11.78□□□□□ -0.52
SF3B2-211ENST00000531041 NUDT3O95989 172 aa11.78□□□□□ -0.52
SF3B2-211ENST00000531041 S100A8P05109 93 aa11.78□□□□□ -0.52
SF3B2-211ENST00000531041 MGPP08493 103 aa11.78□□□□□ -0.52
SF3B2-211ENST00000531041 GYPEP15421 78 aa11.78□□□□□ -0.52
SF3B2-211ENST00000531041 S100PP25815 95 aa11.78□□□□□ -0.52
SF3B2-211ENST00000531041 HBBP68871 147 aa11.78□□□□□ -0.52
SF3B2-211ENST00000531041 MRPL23Q16540 153 aaKnown RBP11.78□□□□□ -0.52
SF3B2-211ENST00000531041 ICOSQ9Y6W8 199 aa11.78□□□□□ -0.52
SF3B2-211ENST00000531041 A0A096LPF7 62 aa11.77□□□□□ -0.52
SF3B2-211ENST00000531041 TRBV10-1A0A0K0K1A3 114 aa11.77□□□□□ -0.52
SF3B2-211ENST00000531041 CAMPP49913 170 aa11.77□□□□□ -0.52
SF3B2-211ENST00000531041 GATD1Q8NB37 220 aa11.77□□□□□ -0.52
SF3B2-211ENST00000531041 LOC100131303A0A0U1RQF7 123 aa11.77□□□□□ -0.53
SF3B2-211ENST00000531041 SUMO4Q6EEV6 95 aa11.77□□□□□ -0.53
SF3B2-211ENST00000531041 ATRAIDQ6UW56 229 aa11.77□□□□□ -0.53
SF3B2-211ENST00000531041 FRZBQ92765 325 aa11.77□□□□□ -0.53
SF3B2-211ENST00000531041 Q9UF83 564 aa11.77□□□□□ -0.53
SF3B2-211ENST00000531041 H7C1H1 209 aa11.76□□□□□ -0.53
SF3B2-211ENST00000531041 M0QY20 66 aa11.76□□□□□ -0.53
SF3B2-211ENST00000531041 URGCP-MRPS24S4R325 110 aa11.76□□□□□ -0.53
SF3B2-211ENST00000531041 P0DMU3 169 aa11.75□□□□□ -0.53
SF3B2-211ENST00000531041 FAM231AP0DMU4 169 aa11.75□□□□□ -0.53
SF3B2-211ENST00000531041 FAM231CP0DMU5 169 aa11.75□□□□□ -0.53
SF3B2-211ENST00000531041 RAB4AP20338 218 aa11.75□□□□□ -0.53
SF3B2-211ENST00000531041 RASL11AQ6T310 242 aa11.75□□□□□ -0.53
SF3B2-211ENST00000531041 AMN1Q8IY45 258 aa11.75□□□□□ -0.53
SF3B2-211ENST00000531041 RNF185Q96GF1 192 aa11.75□□□□□ -0.53
SF3B2-211ENST00000531041 SRIP30626 198 aa11.74□□□□□ -0.53
SF3B2-211ENST00000531041 FAM104BQ5XKR9 115 aa11.74□□□□□ -0.53
SF3B2-211ENST00000531041 NEGR1Q7Z3B1 354 aa11.74□□□□□ -0.53
SF3B2-211ENST00000531041 SH2D6Q7Z4S9 175 aa11.74□□□□□ -0.53
SF3B2-211ENST00000531041 TRBV7-3A0A075B6L6 115 aa11.73□□□□□ -0.53
SF3B2-211ENST00000531041 LINC00694P0DN24 101 aa11.73□□□□□ -0.53
SF3B2-211ENST00000531041 RPL36AP83881 106 aaKnown RBP11.73□□□□□ -0.53
SF3B2-211ENST00000531041 NEXN-AS1Q8NBZ9 246 aa11.73□□□□□ -0.53
SF3B2-211ENST00000531041 RPL36ALQ969Q0 106 aaKnown RBP11.73□□□□□ -0.53
SF3B2-211ENST00000531041 GAGE12JA6NER3 117 aa11.72□□□□□ -0.53
SF3B2-211ENST00000531041 GAGE1Q13065 139 aa11.72□□□□□ -0.53
SF3B2-211ENST00000531041 GAGE4Q13068 117 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms