RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 C14orf178Q8N769 122 aaPredicted RBP4.12□□□□□ -1.75
PCF11-205ENST00000530906 LINC00469Q8N7U9 141 aa4.12□□□□□ -1.75
PCF11-205ENST00000530906 OR11H1Q8NG94 326 aa4.12□□□□□ -1.75
PCF11-205ENST00000530906 DYNLRB2Q8TF09 96 aa4.12□□□□□ -1.75
PCF11-205ENST00000530906 ZNF418Q8TF45 676 aaPredicted RBP4.12□□□□□ -1.75
PCF11-205ENST00000530906 TMEM158Q8WZ71 300 aa4.12□□□□□ -1.75
PCF11-205ENST00000530906 RASL10AQ92737 203 aa4.12□□□□□ -1.75
PCF11-205ENST00000530906 TOMM6Q96B49 74 aa4.12□□□□□ -1.75
PCF11-205ENST00000530906 DUX5Q96PT3 197 aa4.12□□□□□ -1.75
PCF11-205ENST00000530906 FAM110AQ9BQ89 295 aa4.12□□□□□ -1.75
PCF11-205ENST00000530906 ZNF256Q9Y2P7 627 aaPredicted RBP4.12□□□□□ -1.75
PCF11-205ENST00000530906 KIF25-AS1Q9Y6Z4 181 aa4.12□□□□□ -1.75
PCF11-205ENST00000530906 COL12A1Q99715 3063 aa4.12□□□□□ -1.75
PCF11-205ENST00000530906 EPG5Q9HCE0 2579 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 A0A087WX48 190 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 TRAV12-3A0A0B4J271 114 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 hDV102S1A0JD36 115 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 H3BMM0 161 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 VCYO14598 125 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 GNRH2O43555 120 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 NDUFA7O95182 113 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 NUDT3O95989 172 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 IGKCP01834 107 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 PRSS1P07477 247 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 NPSP0C0P6 89 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 SRD5A1P18405 259 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 SEC11AP67812 179 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 RHOHQ15669 191 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 DEFB114Q30KQ6 69 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 MAJINQ3KP22 176 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 ERASQ7Z444 233 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 TRPT1Q86TN4 253 aaKnown RBP4.11□□□□□ -1.75
PCF11-205ENST00000530906 BOD1L2Q8IYS8 172 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 KLHL30-AS1Q8NEE0 82 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 WFDC11Q8NEX6 87 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 TMEM141Q96I45 108 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 RAX2Q96IS3 184 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 KIR2DL4Q99706 377 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 SPXQ9BT56 116 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 HIGD1BQ9P298 99 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 CYSLTR1Q9Y271 337 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 TIMM8BQ9Y5J9 83 aaPredicted RBP4.11□□□□□ -1.75
PCF11-205ENST00000530906 TSSC4Q9Y5U2 329 aaPredicted RBP4.11□□□□□ -1.75
PCF11-205ENST00000530906 TNFRSF18Q9Y5U5 241 aa4.11□□□□□ -1.75
PCF11-205ENST00000530906 TRBV27A0A0K0K1C4 114 aa4.1□□□□□ -1.75
PCF11-205ENST00000530906 A8MWV9 139 aa4.1□□□□□ -1.75
PCF11-205ENST00000530906 F8VRH5 84 aa4.1□□□□□ -1.75
PCF11-205ENST00000530906 H0Y8G0 127 aa4.1□□□□□ -1.75
PCF11-205ENST00000530906 J3KRW8 73 aa4.1□□□□□ -1.75
PCF11-205ENST00000530906 RHODO00212 210 aa4.1□□□□□ -1.75
PCF11-205ENST00000530906 INSP01308 110 aa4.1□□□□□ -1.75
PCF11-205ENST00000530906 MGPP08493 103 aa4.1□□□□□ -1.75
PCF11-205ENST00000530906 TFPI2P48307 235 aa4.1□□□□□ -1.75
PCF11-205ENST00000530906 POLR2KP53803 58 aaKnown RBP4.1□□□□□ -1.75
PCF11-205ENST00000530906 RIPPLY3P57055 190 aa4.1□□□□□ -1.75
PCF11-205ENST00000530906 LINC00315P59091 139 aa4.1□□□□□ -1.75
PCF11-205ENST00000530906 ZNF415Q09FC8 603 aa4.1□□□□□ -1.75
PCF11-205ENST00000530906 HSD52Q0P140 79 aa4.1□□□□□ -1.75
PCF11-205ENST00000530906 KHDC1LQ5JSQ8 128 aa4.1□□□□□ -1.75
PCF11-205ENST00000530906 ADAMTSL5Q6ZMM2 481 aa4.1□□□□□ -1.75
PCF11-205ENST00000530906 TMEM61Q8N0U2 210 aa4.1□□□□□ -1.75
PCF11-205ENST00000530906 ORAOV1Q8WV07 137 aa4.1□□□□□ -1.75
PCF11-205ENST00000530906 TIMM17AQ99595 171 aa4.1□□□□□ -1.75
PCF11-205ENST00000530906 TRAV26-2A0A0B4J265 109 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 A6NDN8 102 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 CCL24O00175 119 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 FGF6P10767 208 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 GATA1P15976 413 aaPredicted RBP4.09□□□□□ -1.75
PCF11-205ENST00000530906 EDN2P20800 178 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 CRYBA4P53673 196 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 DEFB131AP59861 70 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 HILS1P60008 231 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 DEFB1P60022 68 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 BATFQ16520 125 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 TAL2Q16559 108 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 SPINK13Q1W4C9 94 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 NSUN5P1Q3KNT7 163 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 TMEM97Q5BJF2 176 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 SUMO4Q6EEV6 95 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 C2orf66Q6UXQ4 117 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 Q6ZQT7 251 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 DLX4Q92988 240 aaPredicted RBP4.09□□□□□ -1.75
PCF11-205ENST00000530906 C18orf15Q96N68 181 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 SCGB3A1Q96QR1 104 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 CSTL1Q9H114 145 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 MAP6D1Q9H9H5 199 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 YAE1D1Q9NRH1 226 aa4.09□□□□□ -1.75
PCF11-205ENST00000530906 UTP20O75691 2785 aaKnown RBP4.08□□□□□ -1.76
PCF11-205ENST00000530906 SDHAF1A6NFY7 115 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 CBY3A6NI87 242 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 F5H697 171 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 M0QY20 66 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 M0R2P5 195 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 CIDEAO60543 219 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 GAS8-AS1O95177 125 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 CRYGDP07320 174 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 HINT1P49773 126 aaPredicted RBP4.08□□□□□ -1.76
PCF11-205ENST00000530906 DEFB136Q30KP8 78 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 ZNF876PQ49A33 203 aa4.08□□□□□ -1.76
PCF11-205ENST00000530906 MPV17L2Q567V2 206 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms