RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 F5H697 171 aa12.76□□□□□ -0.37
BRCA2-204ENST00000530893 IGKV3-20P01619 116 aa12.76□□□□□ -0.37
BRCA2-204ENST00000530893 SMIM13P0DJ93 91 aa12.76□□□□□ -0.37
BRCA2-204ENST00000530893 GCSHP23434 173 aa12.76□□□□□ -0.37
BRCA2-204ENST00000530893 SPINK13Q1W4C9 94 aa12.76□□□□□ -0.37
BRCA2-204ENST00000530893 AMTNQ6UX39 209 aa12.76□□□□□ -0.37
BRCA2-204ENST00000530893 ZFP2Q6ZN57 461 aa12.76□□□□□ -0.37
BRCA2-204ENST00000530893 MDFICQ9P1T7 246 aa12.76□□□□□ -0.37
BRCA2-204ENST00000530893 ZNF462Q96JM2 2506 aa12.76□□□□□ -0.37
BRCA2-204ENST00000530893 TRGV11A0A075B6L2 103 aa12.76□□□□□ -0.37
BRCA2-204ENST00000530893 A0A087WWL8 130 aa12.76□□□□□ -0.37
BRCA2-204ENST00000530893 OR11H12B2RN74 326 aa12.76□□□□□ -0.37
BRCA2-204ENST00000530893 LINC01619G3V211 115 aa12.76□□□□□ -0.37
BRCA2-204ENST00000530893 KRTAP10-9P60411 292 aa12.76□□□□□ -0.37
BRCA2-204ENST00000530893 PAPPA-AS1Q5QFB9 102 aa12.76□□□□□ -0.37
BRCA2-204ENST00000530893 CEND1Q8N111 149 aa12.76□□□□□ -0.37
BRCA2-204ENST00000530893 OR11H1Q8NG94 326 aa12.76□□□□□ -0.37
BRCA2-204ENST00000530893 OR11H2Q8NH07 326 aa12.76□□□□□ -0.37
BRCA2-204ENST00000530893 TMEM141Q96I45 108 aa12.76□□□□□ -0.37
BRCA2-204ENST00000530893 ZFYVE26Q68DK2 2539 aa12.75□□□□□ -0.37
BRCA2-204ENST00000530893 SDHAF1A6NFY7 115 aa12.75□□□□□ -0.37
BRCA2-204ENST00000530893 PRSS29PA6NIE9 313 aa12.75□□□□□ -0.37
BRCA2-204ENST00000530893 DUX5Q96PT3 197 aa12.75□□□□□ -0.37
BRCA2-204ENST00000530893 FAM208BQ5VWN6 2430 aa12.75□□□□□ -0.37
BRCA2-204ENST00000530893 H3BUT2 72 aa12.74□□□□□ -0.37
BRCA2-204ENST00000530893 RIPPLY3P57055 190 aa12.74□□□□□ -0.37
BRCA2-204ENST00000530893 TIMM17AQ99595 171 aa12.74□□□□□ -0.37
BRCA2-204ENST00000530893 PEMTQ9UBM1 199 aa12.74□□□□□ -0.37
BRCA2-204ENST00000530893 CBY1Q9Y3M2 126 aa12.74□□□□□ -0.37
BRCA2-204ENST00000530893 IGIPA6NJ69 53 aa12.74□□□□□ -0.37
BRCA2-204ENST00000530893 A8MTW9 85 aa12.74□□□□□ -0.37
BRCA2-204ENST00000530893 E9PLD3 99 aa12.74□□□□□ -0.37
BRCA2-204ENST00000530893 CRYGDP07320 174 aa12.74□□□□□ -0.37
BRCA2-204ENST00000530893 FXYD2P54710 66 aa12.74□□□□□ -0.37
BRCA2-204ENST00000530893 TEX29Q8N6K0 151 aa12.74□□□□□ -0.37
BRCA2-204ENST00000530893 MAPKAPK5-AS1Q8N8E1 139 aa12.74□□□□□ -0.37
BRCA2-204ENST00000530893 TP53TG1Q9Y2A0 90 aa12.74□□□□□ -0.37
BRCA2-204ENST00000530893 UFSP1Q6NVU6 142 aa12.73□□□□□ -0.37
BRCA2-204ENST00000530893 TRPT1Q86TN4 253 aaKnown RBP12.73□□□□□ -0.37
BRCA2-204ENST00000530893 TMEM86BQ8N661 226 aa12.73□□□□□ -0.37
BRCA2-204ENST00000530893 C4orf3Q8WVX3 66 aa12.73□□□□□ -0.37
BRCA2-204ENST00000530893 Q96MF0 132 aa12.73□□□□□ -0.37
BRCA2-204ENST00000530893 ZNF256Q9Y2P7 627 aaPredicted RBP12.73□□□□□ -0.37
BRCA2-204ENST00000530893 MYMXA0A1B0GTQ4 84 aa12.72□□□□□ -0.37
BRCA2-204ENST00000530893 GAGE12BA1L429 117 aa12.72□□□□□ -0.37
BRCA2-204ENST00000530893 M0QY20 66 aa12.72□□□□□ -0.37
BRCA2-204ENST00000530893 FAM74A4Q5TZK3 123 aa12.72□□□□□ -0.37
BRCA2-204ENST00000530893 JMJD8Q96S16 334 aa12.72□□□□□ -0.37
BRCA2-204ENST00000530893 LRRK2Q5S007 2527 aa12.72□□□□□ -0.37
BRCA2-204ENST00000530893 A0A1W2PPM0 123 aa12.72□□□□□ -0.37
BRCA2-204ENST00000530893 K7EP34 96 aa12.72□□□□□ -0.37
BRCA2-204ENST00000530893 PMVKQ15126 192 aa12.72□□□□□ -0.37
BRCA2-204ENST00000530893 ZNF56Q15929 161 aa12.72□□□□□ -0.37
BRCA2-204ENST00000530893 NEGR1Q7Z3B1 354 aa12.72□□□□□ -0.37
BRCA2-204ENST00000530893 RNASE8Q8TDE3 154 aaKnown RBP12.72□□□□□ -0.37
BRCA2-204ENST00000530893 SLURP1P55000 103 aa12.71□□□□□ -0.37
BRCA2-204ENST00000530893 RAB37Q96AX2 223 aa12.71□□□□□ -0.37
BRCA2-204ENST00000530893 CHD6Q8TD26 2715 aa12.71□□□□□ -0.38
BRCA2-204ENST00000530893 RHOHQ15669 191 aa12.71□□□□□ -0.38
BRCA2-204ENST00000530893 ZNF876PQ49A33 203 aa12.71□□□□□ -0.38
BRCA2-204ENST00000530893 ZANQ9Y493 2812 aa12.71□□□□□ -0.38
BRCA2-204ENST00000530893 TSHBP01222 138 aa12.7□□□□□ -0.38
BRCA2-204ENST00000530893 NSUN5P1Q3KNT7 163 aa12.7□□□□□ -0.38
BRCA2-204ENST00000530893 OR5A1Q8NGJ0 315 aa12.7□□□□□ -0.38
BRCA2-204ENST00000530893 CST9LQ9H4G1 147 aa12.7□□□□□ -0.38
BRCA2-204ENST00000530893 EDA2RQ9HAV5 297 aa12.7□□□□□ -0.38
BRCA2-204ENST00000530893 POLQO75417 2590 aa12.69□□□□□ -0.38
BRCA2-204ENST00000530893 DOPEY2Q9Y3R5 2298 aa12.69□□□□□ -0.38
BRCA2-204ENST00000530893 FABP2P12104 132 aa12.69□□□□□ -0.38
BRCA2-204ENST00000530893 DEFB131AP59861 70 aa12.69□□□□□ -0.38
BRCA2-204ENST00000530893 PIK3CD-AS1Q5SR53 167 aa12.69□□□□□ -0.38
BRCA2-204ENST00000530893 SAMD5Q5TGI4 173 aa12.69□□□□□ -0.38
BRCA2-204ENST00000530893 AGRNO00468 2067 aa12.68□□□□□ -0.38
BRCA2-204ENST00000530893 H3BMM0 161 aa12.68□□□□□ -0.38
BRCA2-204ENST00000530893 HERVK_113P61574 105 aa12.68□□□□□ -0.38
BRCA2-204ENST00000530893 DEFB136Q30KP8 78 aa12.68□□□□□ -0.38
BRCA2-204ENST00000530893 MORN3Q6PF18 240 aaPredicted RBP12.68□□□□□ -0.38
BRCA2-204ENST00000530893 KRTAP1-3Q8IUG1 177 aa12.68□□□□□ -0.38
BRCA2-204ENST00000530893 PHLDA1Q8WV24 401 aaPredicted RBP12.68□□□□□ -0.38
BRCA2-204ENST00000530893 HIST1H4GQ99525 98 aa12.68□□□□□ -0.38
BRCA2-204ENST00000530893 PRADC1Q9BSG0 188 aa12.68□□□□□ -0.38
BRCA2-204ENST00000530893 PTPN13Q12923 2485 aa12.68□□□□□ -0.38
BRCA2-204ENST00000530893 IGLV4-69A0A075B6H9 119 aa12.67□□□□□ -0.38
BRCA2-204ENST00000530893 C18orf65Q6ZTR6 163 aa12.67□□□□□ -0.38
BRCA2-204ENST00000530893 SPAG8Q99932 426 aaPredicted RBP12.67□□□□□ -0.38
BRCA2-204ENST00000530893 NHP2Q9NX24 153 aaKnown RBP12.67□□□□□ -0.38
BRCA2-204ENST00000530893 MXRA5Q9NR99 2828 aa12.67□□□□□ -0.38
BRCA2-204ENST00000530893 TRBV7-3A0A075B6L6 115 aa12.67□□□□□ -0.38
BRCA2-204ENST00000530893 RBX1P62877 108 aa12.67□□□□□ -0.38
BRCA2-204ENST00000530893 SPCS1Q9Y6A9 102 aa12.67□□□□□ -0.38
BRCA2-204ENST00000530893 NAV2Q8IVL1 2488 aa12.67□□□□□ -0.38
BRCA2-204ENST00000530893 CREBBPQ92793 2442 aa12.67□□□□□ -0.38
BRCA2-204ENST00000530893 KNCNA6PVL3 124 aa12.66□□□□□ -0.38
BRCA2-204ENST00000530893 RPL39P62891 51 aaKnown RBP12.66□□□□□ -0.38
BRCA2-204ENST00000530893 I3L3M4 83 aa12.66□□□□□ -0.38
BRCA2-204ENST00000530893 RBMY1A1P0DJD3 496 aaKnown RBP12.66□□□□□ -0.38
BRCA2-204ENST00000530893 RBMY1CP0DJD4 496 aa12.66□□□□□ -0.38
BRCA2-204ENST00000530893 RBMY1FQ15415 496 aaKnown RBP12.66□□□□□ -0.38
BRCA2-204ENST00000530893 OCIAD2Q56VL3 154 aa12.66□□□□□ -0.38
BRCA2-204ENST00000530893 TMEM61Q8N0U2 210 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms