RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 H3BMG7 143 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 OR2H2O95918 312 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 NMBP08949 121 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 CRYGSP22914 178 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 CKS2P33552 79 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 BLCAPP62952 87 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 EMX2Q04743 252 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 DCUN1D2Q6PH85 259 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 SMIM11BQ8TCY0 68 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 VPS25Q9BRG1 176 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 CCDC32Q9BV29 185 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 BOLA2Q9H3K6 86 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 DNAH5Q8TE73 4624 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 SIPA1L3O60292 1781 aaPredicted RBP-0.38□□□□□ -2.47
NUP98-218ENST00000530516 LAMB1P07942 1786 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 ANKRD11Q6UB99 2663 aaPredicted RBP-0.38□□□□□ -2.47
NUP98-218ENST00000530516 ITPR2Q14571 2701 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 PTPRQQ9UMZ3 2332 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 KIAA0100Q14667 2235 aaKnown RBP-0.38□□□□□ -2.47
NUP98-218ENST00000530516 NRXN2Q9P2S2 1712 aa-0.38□□□□□ -2.47
NUP98-218ENST00000530516 PKD1L1Q8TDX9 2849 aa-0.39□□□□□ -2.47
NUP98-218ENST00000530516 SSC5DA1L4H1 1573 aa-0.39□□□□□ -2.47
NUP98-218ENST00000530516 IGHV1-24A0A0C4DH33 117 aa-0.39□□□□□ -2.47
NUP98-218ENST00000530516 ZNF670-ZNF695F2Z2N8 137 aa-0.39□□□□□ -2.47
NUP98-218ENST00000530516 HBDP02042 147 aa-0.39□□□□□ -2.47
NUP98-218ENST00000530516 APODP05090 189 aa-0.39□□□□□ -2.47
NUP98-218ENST00000530516 BASP1P80723 227 aaKnown RBP-0.39□□□□□ -2.47
NUP98-218ENST00000530516 MRPS15P82914 257 aaKnown RBP-0.39□□□□□ -2.47
NUP98-218ENST00000530516 C3orf33Q6P1S2 294 aa-0.39□□□□□ -2.47
NUP98-218ENST00000530516 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.39□□□□□ -2.47
NUP98-218ENST00000530516 OTOSQ8NHW6 89 aa-0.39□□□□□ -2.47
NUP98-218ENST00000530516 PPDPFLQ8WWR9 84 aa-0.39□□□□□ -2.47
NUP98-218ENST00000530516 MED31Q9Y3C7 131 aa-0.39□□□□□ -2.47
NUP98-218ENST00000530516 ITPR1Q14643 2758 aa-0.39□□□□□ -2.47
NUP98-218ENST00000530516 MYH13Q9UKX3 1938 aa-0.39□□□□□ -2.47
NUP98-218ENST00000530516 TRRAPQ9Y4A5 3859 aa-0.39□□□□□ -2.47
NUP98-218ENST00000530516 NHSL1Q5SYE7 1610 aa-0.39□□□□□ -2.47
NUP98-218ENST00000530516 SMG1Q96Q15 3661 aaKnown RBP-0.4□□□□□ -2.47
NUP98-218ENST00000530516 RIF1Q5UIP0 2472 aaKnown RBP-0.4□□□□□ -2.47
NUP98-218ENST00000530516 PKDREJQ9NTG1 2253 aa-0.4□□□□□ -2.47
NUP98-218ENST00000530516 LAMA1P25391 3075 aa-0.4□□□□□ -2.47
NUP98-218ENST00000530516 GVQW2A0A096LPI5 108 aaPredicted RBP-0.4□□□□□ -2.47
NUP98-218ENST00000530516 TRAV17A0A0B4J275 112 aa-0.4□□□□□ -2.47
NUP98-218ENST00000530516 LOC107984640A0A0U1RRK4 108 aa-0.4□□□□□ -2.47
NUP98-218ENST00000530516 E7EQ34 232 aa-0.4□□□□□ -2.47
NUP98-218ENST00000530516 TMEM78Q5T7P6 136 aa-0.4□□□□□ -2.47
NUP98-218ENST00000530516 STX12Q86Y82 276 aa-0.4□□□□□ -2.47
NUP98-218ENST00000530516 CBLN4Q9NTU7 201 aa-0.4□□□□□ -2.47
NUP98-218ENST00000530516 GCN1Q92616 2671 aaKnown RBP-0.4□□□□□ -2.47
NUP98-218ENST00000530516 LAMA3Q16787 3333 aa-0.4□□□□□ -2.47
NUP98-218ENST00000530516 ATRQ13535 2644 aa-0.4□□□□□ -2.47
NUP98-218ENST00000530516 MTORP42345 2549 aa-0.4□□□□□ -2.47
NUP98-218ENST00000530516 MGAM2Q2M2H8 2515 aa-0.4□□□□□ -2.47
NUP98-218ENST00000530516 DNAH11Q96DT5 4516 aa-0.41□□□□□ -2.47
NUP98-218ENST00000530516 AKAP6Q13023 2319 aa-0.41□□□□□ -2.47
NUP98-218ENST00000530516 DNAH8Q96JB1 4490 aa-0.41□□□□□ -2.47
NUP98-218ENST00000530516 SPTBN2O15020 2390 aa-0.41□□□□□ -2.47
NUP98-218ENST00000530516 TACC2O95359 2948 aa-0.41□□□□□ -2.48
NUP98-218ENST00000530516 TRAV2A0A0B4J234 112 aa-0.41□□□□□ -2.48
NUP98-218ENST00000530516 RBAKDNA6NC62 111 aa-0.41□□□□□ -2.48
NUP98-218ENST00000530516 UQCRQO14949 82 aa-0.41□□□□□ -2.48
NUP98-218ENST00000530516 ELOF1P60002 83 aaKnown RBP-0.41□□□□□ -2.48
NUP98-218ENST00000530516 TRIQKQ629K1 86 aa-0.41□□□□□ -2.48
NUP98-218ENST00000530516 HOPXQ9BPY8 73 aaPredicted RBP-0.41□□□□□ -2.48
NUP98-218ENST00000530516 TMEM242Q9NWH2 141 aa-0.41□□□□□ -2.48
NUP98-218ENST00000530516 SPENQ96T58 3664 aaKnown RBP-0.41□□□□□ -2.48
NUP98-218ENST00000530516 CCDC171Q6TFL3 1326 aa-0.41□□□□□ -2.48
NUP98-218ENST00000530516 MYH8P13535 1937 aa-0.42□□□□□ -2.48
NUP98-218ENST00000530516 MAP1BP46821 2468 aaKnown RBP-0.42□□□□□ -2.48
NUP98-218ENST00000530516 CEP295Q9C0D2 2601 aa-0.42□□□□□ -2.48
NUP98-218ENST00000530516 CXorf51AA0A1B0GTR3 108 aa-0.42□□□□□ -2.48
NUP98-218ENST00000530516 A0A1W2PRE2 83 aa-0.42□□□□□ -2.48
NUP98-218ENST00000530516 M0QZK8 103 aa-0.42□□□□□ -2.48
NUP98-218ENST00000530516 CFDP00746 253 aaPredicted RBP-0.42□□□□□ -2.48
NUP98-218ENST00000530516 COX4I1P13073 169 aa-0.42□□□□□ -2.48
NUP98-218ENST00000530516 HIST1H1BP16401 226 aaKnown RBP-0.42□□□□□ -2.48
NUP98-218ENST00000530516 RPL22P35268 128 aaKnown RBP-0.42□□□□□ -2.48
NUP98-218ENST00000530516 AKR1D1P51857 326 aa-0.42□□□□□ -2.48
NUP98-218ENST00000530516 POLR2HP52434 150 aaKnown RBP-0.42□□□□□ -2.48
NUP98-218ENST00000530516 CRYBA4P53673 196 aa-0.42□□□□□ -2.48
NUP98-218ENST00000530516 PCBD1P61457 104 aa-0.42□□□□□ -2.48
NUP98-218ENST00000530516 PLGLB1Q02325 96 aa-0.42□□□□□ -2.48
NUP98-218ENST00000530516 HRCT1Q6UXD1 115 aa-0.42□□□□□ -2.48
NUP98-218ENST00000530516 NDUFA11Q86Y39 141 aa-0.42□□□□□ -2.48
NUP98-218ENST00000530516 BRK1Q8WUW1 75 aa-0.42□□□□□ -2.48
NUP98-218ENST00000530516 THEM6Q8WUY1 208 aa-0.42□□□□□ -2.48
NUP98-218ENST00000530516 TAS2R8Q9NYW2 309 aa-0.42□□□□□ -2.48
NUP98-218ENST00000530516 METTL1Q9UBP6 276 aaKnown RBP-0.42□□□□□ -2.48
NUP98-218ENST00000530516 ATPIF1Q9UII2 106 aa-0.42□□□□□ -2.48
NUP98-218ENST00000530516 ARHGAP31Q2M1Z3 1444 aa-0.42□□□□□ -2.48
NUP98-218ENST00000530516 ARAP1Q96P48 1450 aa-0.42□□□□□ -2.48
NUP98-218ENST00000530516 WNK3Q9BYP7 1800 aa-0.43□□□□□ -2.48
NUP98-218ENST00000530516 MED23Q9ULK4 1368 aa-0.43□□□□□ -2.48
NUP98-218ENST00000530516 SRCAPQ6ZRS2 3230 aa-0.43□□□□□ -2.48
NUP98-218ENST00000530516 A0A0C4DFX4 3053 aa-0.43□□□□□ -2.48
NUP98-218ENST00000530516 CCDC168Q8NDH2 2452 aa-0.43□□□□□ -2.48
NUP98-218ENST00000530516 ZFHX3Q15911 3703 aa-0.43□□□□□ -2.48
NUP98-218ENST00000530516 TCRBV3S1A0A5B6 114 aa-0.43□□□□□ -2.48
NUP98-218ENST00000530516 TMEM238C9JI98 176 aa-0.43□□□□□ -2.48
NUP98-218ENST00000530516 GID8Q9NWU2 228 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms