RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 TANC2Q9HCD6 1990 aa2.85□□□□□ -1.95
USP47-209ENST00000530041 IGHV3-74A0A0B4J1X5 117 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 PLAC8L1A1L4L8 177 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 H3BUT2 72 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 IGHV1-46P01743 117 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 HBDP02042 147 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 ORM2P19652 201 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 RPL27AP46776 148 aaKnown RBP2.84□□□□□ -1.95
USP47-209ENST00000530041 CRIP1P50238 77 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 TNFAIP6P98066 277 aaPredicted RBP2.84□□□□□ -1.95
USP47-209ENST00000530041 LOXL1Q08397 574 aaPredicted RBP2.84□□□□□ -1.95
USP47-209ENST00000530041 VMA21Q3ZAQ7 101 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 C10orf55Q5SWW7 151 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 FAM104BQ5XKR9 115 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 GOLT1AQ6ZVE7 132 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 FAM216BQ8N7L0 139 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 CNEP1R1Q8N9A8 125 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 SRSF12Q8WXF0 261 aaKnown RBP2.84□□□□□ -1.95
USP47-209ENST00000530041 IFI27L1Q96BM0 104 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 ZC2HC1AQ96GY0 325 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 AP1S3Q96PC3 154 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 TIMM17AQ99595 171 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 CCL13Q99616 98 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 MAP1LC3AQ9H492 121 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 ZNRD1Q9P1U0 126 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 SMPXQ9UHP9 88 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 PRO0628Q9UI54 55 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 HIGD1AQ9Y241 93 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 DSCAMO60469 2012 aa2.84□□□□□ -1.95
USP47-209ENST00000530041 A0A0C4DFX4 3053 aa2.84□□□□□ -1.96
USP47-209ENST00000530041 PCNX2A6NKB5 2137 aa2.83□□□□□ -1.96
USP47-209ENST00000530041 MED13Q9UHV7 2174 aa2.83□□□□□ -1.96
USP47-209ENST00000530041 TRBV19A0A075B6N1 114 aa2.83□□□□□ -1.96
USP47-209ENST00000530041 H3BRN7 92 aa2.83□□□□□ -1.96
USP47-209ENST00000530041 I3L2K1 104 aa2.83□□□□□ -1.96
USP47-209ENST00000530041 SMIM13P0DJ93 91 aa2.83□□□□□ -1.96
USP47-209ENST00000530041 FABP2P12104 132 aa2.83□□□□□ -1.96
USP47-209ENST00000530041 EVI2AP22794 236 aa2.83□□□□□ -1.96
USP47-209ENST00000530041 IFI27P40305 119 aaPredicted RBP2.83□□□□□ -1.96
USP47-209ENST00000530041 SMAGPQ0VAQ4 97 aa2.83□□□□□ -1.96
USP47-209ENST00000530041 SRSF6Q13247 344 aaKnown RBP2.83□□□□□ -1.96
USP47-209ENST00000530041 MRPL51Q4U2R6 128 aaKnown RBP2.83□□□□□ -1.96
USP47-209ENST00000530041 CEMP1Q6PRD7 247 aaPredicted RBP2.83□□□□□ -1.96
USP47-209ENST00000530041 LYPD2Q6UXB3 125 aa2.83□□□□□ -1.96
USP47-209ENST00000530041 FOXI2Q6ZQN5 318 aa2.83□□□□□ -1.96
USP47-209ENST00000530041 PRNTQ86SH4 94 aa2.83□□□□□ -1.96
USP47-209ENST00000530041 ORMDL3Q8N138 153 aa2.83□□□□□ -1.96
USP47-209ENST00000530041 PRELID3AQ96N28 172 aa2.83□□□□□ -1.96
USP47-209ENST00000530041 SHANK2-AS3Q9BTD1 123 aa2.83□□□□□ -1.96
USP47-209ENST00000530041 KLK12Q9UKR0 248 aa2.83□□□□□ -1.96
USP47-209ENST00000530041 HILPDAQ9Y5L2 63 aa2.83□□□□□ -1.96
USP47-209ENST00000530041 SPCS1Q9Y6A9 102 aa2.83□□□□□ -1.96
USP47-209ENST00000530041 PRR14LQ5THK1 2151 aa2.83□□□□□ -1.96
USP47-209ENST00000530041 CACNA1GO43497 2377 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 TRANK1O15050 2925 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 TRAV8-1A0A0A6YYK1 113 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 TRAV8-2A0A0B4J237 113 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 TRAV17A0A0B4J275 112 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 D6R8Y8 96 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 NDUFC2-KCTD14E9PQ53 114 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 ZNF207O43670 478 aaKnown RBP2.82□□□□□ -1.96
USP47-209ENST00000530041 IGKV1-17P01599 117 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 IGLC6P0CF74 106 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 CCL3L1P16619 93 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 FCER1GP30273 86 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 NMUP48645 174 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 PDE6HQ13956 83 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 DIAPH2-AS1Q14236 149 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 TMEM155Q4W5P6 130 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 SAMD13Q5VXD3 122 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 HCP5Q6MZN7 132 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 LYZL1Q6UWQ5 148 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 Q6ZS92 163 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 CAMK2N1Q7Z7J9 78 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 PCP2Q8IVA1 136 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 EXOC3-AS1Q8N2X6 119 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 DEFB108BQ8NET1 73 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 OR8A1Q8NGG7 326 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 C18orf15Q96N68 181 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 SIGMAR1Q99720 223 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 RNF5Q99942 180 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 CNFNQ9BYD5 112 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 FBXL15Q9H469 300 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 KAAG1Q9UBP8 84 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 HHLA3Q9XRX5 114 aa2.82□□□□□ -1.96
USP47-209ENST00000530041 IGLV2-18A0A075B6J9 118 aa2.81□□□□□ -1.96
USP47-209ENST00000530041 IGKV2D-26A0A0A0MRZ7 120 aa2.81□□□□□ -1.96
USP47-209ENST00000530041 IGLL5B9A064 214 aa2.81□□□□□ -1.96
USP47-209ENST00000530041 F8W1H4 67 aa2.81□□□□□ -1.96
USP47-209ENST00000530041 K7EIM0 57 aa2.81□□□□□ -1.96
USP47-209ENST00000530041 SH2D1AO60880 128 aa2.81□□□□□ -1.96
USP47-209ENST00000530041 NPYP01303 97 aa2.81□□□□□ -1.96
USP47-209ENST00000530041 INSP01308 110 aa2.81□□□□□ -1.96
USP47-209ENST00000530041 S100A7P31151 101 aa2.81□□□□□ -1.96
USP47-209ENST00000530041 CXCL5P42830 114 aa2.81□□□□□ -1.96
USP47-209ENST00000530041 FXYD2P54710 66 aa2.81□□□□□ -1.96
USP47-209ENST00000530041 ERCC8Q13216 396 aa2.81□□□□□ -1.96
USP47-209ENST00000530041 PLGLAQ15195 96 aa2.81□□□□□ -1.96
USP47-209ENST00000530041 FBXL19-AS1Q494R0 122 aa2.81□□□□□ -1.96
USP47-209ENST00000530041 S100A7AQ86SG5 101 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms