RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 Q0VG73 95 aa1.55□□□□□ -2.16
SVIP-203ENST00000529848 C9orf153Q5TBE3 101 aa1.55□□□□□ -2.16
SVIP-203ENST00000529848 PHF5AQ7RTV0 110 aaKnown RBP1.55□□□□□ -2.16
SVIP-203ENST00000529848 ARPINQ7Z6K5 226 aa1.55□□□□□ -2.16
SVIP-203ENST00000529848 C10orf126Q8N4M7 172 aa1.55□□□□□ -2.16
SVIP-203ENST00000529848 C3orf56Q8N813 242 aa1.55□□□□□ -2.16
SVIP-203ENST00000529848 S100ZQ8WXG8 99 aa1.55□□□□□ -2.16
SVIP-203ENST00000529848 TSLPQ969D9 159 aa1.55□□□□□ -2.16
SVIP-203ENST00000529848 C2orf50Q96LR7 162 aa1.55□□□□□ -2.16
SVIP-203ENST00000529848 S100A13Q99584 98 aa1.55□□□□□ -2.16
SVIP-203ENST00000529848 SEC11CQ9BY50 192 aa1.55□□□□□ -2.16
SVIP-203ENST00000529848 TTTY13Q9BZ97 58 aa1.55□□□□□ -2.16
SVIP-203ENST00000529848 AGPAT4-IT1Q9H0P7 198 aa1.55□□□□□ -2.16
SVIP-203ENST00000529848 SMCO4Q9NRQ5 59 aa1.55□□□□□ -2.16
SVIP-203ENST00000529848 PRO2289Q9P1D8 64 aa1.55□□□□□ -2.16
SVIP-203ENST00000529848 LSM2Q9Y333 95 aaKnown RBP1.55□□□□□ -2.16
SVIP-203ENST00000529848 BDP1A6H8Y1 2624 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 OBSL1O75147 1896 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 PLXNA4Q9HCM2 1894 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 MYO5AQ9Y4I1 1855 aaKnown RBP1.54□□□□□ -2.16
SVIP-203ENST00000529848 SCN8AQ9UQD0 1980 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 MICAL3Q7RTP6 2002 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 TECTAO75443 2155 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 TRAV12-2A0A075B6T6 113 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 TRBV27A0A0K0K1C4 114 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 TCRBV3S1A0A5B6 114 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 IGLC7A0M8Q6 106 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 M0R2P5 195 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 UQCRQO14949 82 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 CST7O76096 145 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 UBL3O95164 117 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 SRP19P09132 144 aaKnown RBP1.54□□□□□ -2.16
SVIP-203ENST00000529848 PYYP10082 97 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 HLA-DRB4P13762 266 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 FABP4P15090 132 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 IL9P15248 144 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 SRP14P37108 136 aaKnown RBP1.54□□□□□ -2.16
SVIP-203ENST00000529848 SNRPD3P62318 126 aaKnown RBP1.54□□□□□ -2.16
SVIP-203ENST00000529848 HBBP68871 147 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 MIAQ16674 131 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 KRTAP13-4Q3LI77 160 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 AADACL3Q5VUY0 350 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 EIF5AL1Q6IS14 154 aaKnown RBP1.54□□□□□ -2.16
SVIP-203ENST00000529848 TMEM91Q6ZNR0 172 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 Q6ZS92 163 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 Q6ZTI0 123 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 FP248Q71RG6 208 aaPredicted RBP1.54□□□□□ -2.16
SVIP-203ENST00000529848 TEN1Q86WV5 123 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 Q8N2B8 174 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 OR4B1Q8NGF8 309 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 PSMF1Q92530 271 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 HYLS1Q96M11 299 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 DSCR8Q96T75 97 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 TIMM21Q9BVV7 248 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 CKLFQ9UBR5 152 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 DNAJC15Q9Y5T4 150 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 HLA-DRB4X5D2U9 266 aa1.54□□□□□ -2.16
SVIP-203ENST00000529848 ZFC3H1O60293 1989 aaKnown RBP1.54□□□□□ -2.16
SVIP-203ENST00000529848 C3orf85A0A1B0GTC6 90 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 FAM186AA6NE01 2351 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 OR1I1O60431 355 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 CREBL2O60519 120 aaPredicted RBP1.53□□□□□ -2.16
SVIP-203ENST00000529848 NDUFB6O95139 128 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 TRGC1P0CF51 173 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 ZNF705DP0CH99 300 aaPredicted RBP1.53□□□□□ -2.16
SVIP-203ENST00000529848 SLC25A6P12236 298 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 ADCYAP1P18509 176 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 PTPRBP23467 1997 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 HIST1H2BOP23527 126 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 HIST1H2BBP33778 126 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 DYNLT3P51808 116 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 HIST1H2BDP58876 126 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 HIST1H2BCP62807 126 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 RPL30P62888 115 aaKnown RBP1.53□□□□□ -2.16
SVIP-203ENST00000529848 EIF5AP63241 154 aaKnown RBP1.53□□□□□ -2.16
SVIP-203ENST00000529848 HIST2H2BEQ16778 126 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 LINC01554Q52M75 96 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 Q56UQ5 140 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.53□□□□□ -2.16
SVIP-203ENST00000529848 MORN4Q8NDC4 146 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 HIST1H2BHQ93079 126 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 HIST1H2BNQ99877 126 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 HIST1H2BMQ99879 126 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 NAA60Q9H7X0 242 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 BCL2L10Q9HD36 194 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 CCDC88CQ9P219 2028 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 NOP16Q9Y3C1 178 aaKnown RBP1.53□□□□□ -2.16
SVIP-203ENST00000529848 TPRKBQ9Y3C4 175 aa1.53□□□□□ -2.16
SVIP-203ENST00000529848 CACNA1HO95180 2353 aa1.52□□□□□ -2.17
SVIP-203ENST00000529848 TET1Q8NFU7 2136 aa1.52□□□□□ -2.17
SVIP-203ENST00000529848 TANC2Q9HCD6 1990 aa1.52□□□□□ -2.17
SVIP-203ENST00000529848 TCHHQ07283 1943 aa1.52□□□□□ -2.17
SVIP-203ENST00000529848 IGHV3-64A0A075B6Q5 118 aa1.52□□□□□ -2.17
SVIP-203ENST00000529848 TMSB15BA0A087X1C1 80 aa1.52□□□□□ -2.17
SVIP-203ENST00000529848 TRAV1-1A0A0B4J248 108 aa1.52□□□□□ -2.17
SVIP-203ENST00000529848 RBAKDNA6NC62 111 aa1.52□□□□□ -2.17
SVIP-203ENST00000529848 MCRIP1C9JLW8 97 aa1.52□□□□□ -2.17
SVIP-203ENST00000529848 H3BT86 120 aa1.52□□□□□ -2.17
SVIP-203ENST00000529848 APOC4-APOC2K7ER74 178 aa1.52□□□□□ -2.17
SVIP-203ENST00000529848 NDUFB3O43676 98 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms