RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 EVI2AP22794 236 aa8.31□□□□□ -1.08
USH1C-208ENST00000529563 CRYBA4P53673 196 aa8.31□□□□□ -1.08
USH1C-208ENST00000529563 LYPD5Q6UWN5 251 aa8.31□□□□□ -1.08
USH1C-208ENST00000529563 FRZBQ92765 325 aa8.31□□□□□ -1.08
USH1C-208ENST00000529563 IL36BQ9NZH7 164 aa8.31□□□□□ -1.08
USH1C-208ENST00000529563 DNAH5Q8TE73 4624 aa8.3□□□□□ -1.08
USH1C-208ENST00000529563 M0R381 172 aa8.3□□□□□ -1.08
USH1C-208ENST00000529563 INAFM2P0DMQ5 153 aa8.3□□□□□ -1.08
USH1C-208ENST00000529563 RPL19P84098 196 aaKnown RBP8.3□□□□□ -1.08
USH1C-208ENST00000529563 TMEM241Q24JQ0 296 aa8.3□□□□□ -1.08
USH1C-208ENST00000529563 CLLU1Q5K131 121 aa8.3□□□□□ -1.08
USH1C-208ENST00000529563 SPANXN1Q5VSR9 72 aa8.3□□□□□ -1.08
USH1C-208ENST00000529563 Q6ZRN7 208 aaPredicted RBP8.3□□□□□ -1.08
USH1C-208ENST00000529563 ZFP82Q8N141 532 aa8.3□□□□□ -1.08
USH1C-208ENST00000529563 C15orf54Q8N8G6 183 aa8.3□□□□□ -1.08
USH1C-208ENST00000529563 OCC1Q8TAD7 63 aa8.3□□□□□ -1.08
USH1C-208ENST00000529563 RASL10AQ92737 203 aa8.3□□□□□ -1.08
USH1C-208ENST00000529563 MSRB1Q9NZV6 116 aa8.3□□□□□ -1.08
USH1C-208ENST00000529563 TNFRSF18Q9Y5U5 241 aa8.3□□□□□ -1.08
USH1C-208ENST00000529563 TRAV4A0A0B4J268 109 aa8.29□□□□□ -1.08
USH1C-208ENST00000529563 A8MWV9 139 aa8.29□□□□□ -1.08
USH1C-208ENST00000529563 GATCO43716 136 aaKnown RBP8.29□□□□□ -1.08
USH1C-208ENST00000529563 CIDEAO60543 219 aa8.29□□□□□ -1.08
USH1C-208ENST00000529563 SMIM17P0DL12 118 aa8.29□□□□□ -1.08
USH1C-208ENST00000529563 GYPEP15421 78 aa8.29□□□□□ -1.08
USH1C-208ENST00000529563 SSTP61278 116 aa8.29□□□□□ -1.08
USH1C-208ENST00000529563 FHL2Q14192 279 aa8.29□□□□□ -1.08
USH1C-208ENST00000529563 BORCS7Q96B45 105 aa8.29□□□□□ -1.08
USH1C-208ENST00000529563 C9orf85Q96MD7 179 aa8.29□□□□□ -1.08
USH1C-208ENST00000529563 TRBV20OR9-2A0A075B6H5 130 aa8.28□□□□□ -1.08
USH1C-208ENST00000529563 PSCAO43653 123 aa8.28□□□□□ -1.08
USH1C-208ENST00000529563 CXCL1P09341 107 aa8.28□□□□□ -1.08
USH1C-208ENST00000529563 SFTA3P0C7M3 94 aa8.28□□□□□ -1.08
USH1C-208ENST00000529563 DNAH10OSP0CZ25 163 aa8.28□□□□□ -1.08
USH1C-208ENST00000529563 RNASE3P12724 160 aaKnown RBP8.28□□□□□ -1.08
USH1C-208ENST00000529563 ADIRFQ15847 76 aa8.28□□□□□ -1.08
USH1C-208ENST00000529563 FER1L6-AS1Q8NA97 138 aa8.28□□□□□ -1.08
USH1C-208ENST00000529563 RPP21Q9H633 154 aaKnown RBP8.28□□□□□ -1.08
USH1C-208ENST00000529563 NAT8Q9UHE5 227 aa8.28□□□□□ -1.08
USH1C-208ENST00000529563 APOBP04114 4563 aaKnown RBP8.27□□□□□ -1.08
USH1C-208ENST00000529563 A0A087WTM6 91 aa8.27□□□□□ -1.09
USH1C-208ENST00000529563 K7EQD1 137 aa8.27□□□□□ -1.09
USH1C-208ENST00000529563 IGLV2-8P01709 118 aa8.27□□□□□ -1.09
USH1C-208ENST00000529563 CRYGDP07320 174 aa8.27□□□□□ -1.09
USH1C-208ENST00000529563 DNLZQ5SXM8 178 aa8.27□□□□□ -1.09
USH1C-208ENST00000529563 FAM74A4Q5TZK3 123 aa8.27□□□□□ -1.09
USH1C-208ENST00000529563 Q5VSD8 79 aa8.27□□□□□ -1.09
USH1C-208ENST00000529563 C10orf126Q8N4M7 172 aa8.27□□□□□ -1.09
USH1C-208ENST00000529563 NUDT10Q8NFP7 164 aa8.27□□□□□ -1.09
USH1C-208ENST00000529563 NUDT11Q96G61 164 aa8.27□□□□□ -1.09
USH1C-208ENST00000529563 ZNF479Q96JC4 524 aa8.27□□□□□ -1.09
USH1C-208ENST00000529563 PRADC1Q9BSG0 188 aa8.27□□□□□ -1.09
USH1C-208ENST00000529563 RNASE7Q9H1E1 156 aaKnown RBP8.27□□□□□ -1.09
USH1C-208ENST00000529563 IGHV3-73A0A0B4J1V6 119 aa8.26□□□□□ -1.09
USH1C-208ENST00000529563 C19orf71A6NCJ1 209 aa8.26□□□□□ -1.09
USH1C-208ENST00000529563 A8MWL6 223 aa8.26□□□□□ -1.09
USH1C-208ENST00000529563 F2Z2F3 143 aa8.26□□□□□ -1.09
USH1C-208ENST00000529563 K7EP13 123 aa8.26□□□□□ -1.09
USH1C-208ENST00000529563 RHODO00212 210 aa8.26□□□□□ -1.09
USH1C-208ENST00000529563 PIK3CD-AS1Q5SR53 167 aa8.26□□□□□ -1.09
USH1C-208ENST00000529563 SMIM15Q7Z3B0 74 aa8.26□□□□□ -1.09
USH1C-208ENST00000529563 WFDC10BQ8IUB3 73 aa8.26□□□□□ -1.09
USH1C-208ENST00000529563 PTH2Q96A98 100 aa8.26□□□□□ -1.09
USH1C-208ENST00000529563 K7EN84 100 aa8.25□□□□□ -1.09
USH1C-208ENST00000529563 RS1O15537 224 aa8.25□□□□□ -1.09
USH1C-208ENST00000529563 OR5AL1P0C617 328 aa8.25□□□□□ -1.09
USH1C-208ENST00000529563 GZMBP10144 247 aa8.25□□□□□ -1.09
USH1C-208ENST00000529563 GCSHP23434 173 aa8.25□□□□□ -1.09
USH1C-208ENST00000529563 CACNG7P62955 275 aa8.25□□□□□ -1.09
USH1C-208ENST00000529563 SRSF3P84103 164 aaKnown RBP8.25□□□□□ -1.09
USH1C-208ENST00000529563 CFAP126Q5VTH2 177 aa8.25□□□□□ -1.09
USH1C-208ENST00000529563 DMRTA1Q5VZB9 504 aa8.25□□□□□ -1.09
USH1C-208ENST00000529563 LINC01551Q86U37 167 aa8.25□□□□□ -1.09
USH1C-208ENST00000529563 IGLV5-52A0A0A0MRZ9 124 aa8.24□□□□□ -1.09
USH1C-208ENST00000529563 MUC21A0A0G2JKD1 596 aa8.24□□□□□ -1.09
USH1C-208ENST00000529563 MUC21A0A140T8X8 626 aa8.24□□□□□ -1.09
USH1C-208ENST00000529563 F5H697 171 aa8.24□□□□□ -1.09
USH1C-208ENST00000529563 FAM229AH3BQW9 127 aa8.24□□□□□ -1.09
USH1C-208ENST00000529563 IFITM2Q01629 132 aa8.24□□□□□ -1.09
USH1C-208ENST00000529563 FAM231DQ6ZW35 169 aa8.24□□□□□ -1.09
USH1C-208ENST00000529563 SH2D6Q7Z4S9 175 aa8.24□□□□□ -1.09
USH1C-208ENST00000529563 AP1S3Q96PC3 154 aa8.24□□□□□ -1.09
USH1C-208ENST00000529563 SMR3BP02814 79 aaPredicted RBP8.23□□□□□ -1.09
USH1C-208ENST00000529563 TRGC1P0CF51 173 aa8.23□□□□□ -1.09
USH1C-208ENST00000529563 XGP55808 180 aa8.23□□□□□ -1.09
USH1C-208ENST00000529563 KRTAP10-1P60331 282 aa8.23□□□□□ -1.09
USH1C-208ENST00000529563 RHOHQ15669 191 aa8.23□□□□□ -1.09
USH1C-208ENST00000529563 ZNF56Q15929 161 aa8.23□□□□□ -1.09
USH1C-208ENST00000529563 UQCC3Q6UW78 93 aa8.23□□□□□ -1.09
USH1C-208ENST00000529563 ZFP2Q6ZN57 461 aa8.23□□□□□ -1.09
USH1C-208ENST00000529563 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.23□□□□□ -1.09
USH1C-208ENST00000529563 OR10G8Q8NGN5 311 aa8.23□□□□□ -1.09
USH1C-208ENST00000529563 OR10AG1Q8NH19 301 aa8.23□□□□□ -1.09
USH1C-208ENST00000529563 SFRP2Q96HF1 295 aa8.23□□□□□ -1.09
USH1C-208ENST00000529563 OSTCQ9NRP0 149 aa8.23□□□□□ -1.09
USH1C-208ENST00000529563 DMBT1Q9UGM3 2413 aaPredicted RBP8.23□□□□□ -1.09
USH1C-208ENST00000529563 A0A087WWL8 130 aa8.22□□□□□ -1.09
USH1C-208ENST00000529563 TRAV8-6A0A0B4J262 113 aa8.22□□□□□ -1.09
USH1C-208ENST00000529563 C9JQL5 133 aa8.22□□□□□ -1.09
USH1C-208ENST00000529563 SNAI2O43623 268 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms