RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 RAB37Q96AX2 223 aa10.95□□□□□ -0.66
NR1H3-231ENST00000529540 TM2D2Q9BX73 214 aa10.95□□□□□ -0.66
NR1H3-231ENST00000529540 IGKV2D-26A0A0A0MRZ7 120 aa10.95□□□□□ -0.66
NR1H3-231ENST00000529540 IGHV7-4-1A0A0J9YVY3 117 aa10.95□□□□□ -0.66
NR1H3-231ENST00000529540 TAL2Q16559 108 aa10.95□□□□□ -0.66
NR1H3-231ENST00000529540 PHLDA1Q8WV24 401 aaPredicted RBP10.95□□□□□ -0.66
NR1H3-231ENST00000529540 DLX4Q92988 240 aaPredicted RBP10.95□□□□□ -0.66
NR1H3-231ENST00000529540 DUX3Q96PT4 197 aa10.95□□□□□ -0.66
NR1H3-231ENST00000529540 NAA38Q9BRA0 125 aaKnown RBP10.95□□□□□ -0.66
NR1H3-231ENST00000529540 MSRB1Q9NZV6 116 aa10.95□□□□□ -0.66
NR1H3-231ENST00000529540 U3KQE9 123 aa10.95□□□□□ -0.66
NR1H3-231ENST00000529540 BUB3O43684 328 aa10.94□□□□□ -0.66
NR1H3-231ENST00000529540 HLA-DMBP28068 263 aa10.94□□□□□ -0.66
NR1H3-231ENST00000529540 FXYD2P54710 66 aa10.94□□□□□ -0.66
NR1H3-231ENST00000529540 TCTAP57738 103 aa10.94□□□□□ -0.66
NR1H3-231ENST00000529540 WFDC3Q8IUB2 231 aa10.94□□□□□ -0.66
NR1H3-231ENST00000529540 MRPL53Q96EL3 112 aaKnown RBP10.94□□□□□ -0.66
NR1H3-231ENST00000529540 C18orf15Q96N68 181 aa10.94□□□□□ -0.66
NR1H3-231ENST00000529540 SLC50A1Q9BRV3 221 aa10.94□□□□□ -0.66
NR1H3-231ENST00000529540 IGHV3OR16-8A0A075B7F1 116 aa10.93□□□□□ -0.66
NR1H3-231ENST00000529540 GCSHP23434 173 aa10.93□□□□□ -0.66
NR1H3-231ENST00000529540 KRTAP21-3Q3LHN1 58 aa10.93□□□□□ -0.66
NR1H3-231ENST00000529540 GAS8-AS1O95177 125 aa10.92□□□□□ -0.66
NR1H3-231ENST00000529540 PRSS1P07477 247 aa10.92□□□□□ -0.66
NR1H3-231ENST00000529540 TM4SF20Q53R12 229 aa10.92□□□□□ -0.66
NR1H3-231ENST00000529540 HIST2H2BDQ6DRA6 164 aa10.92□□□□□ -0.66
NR1H3-231ENST00000529540 RHPN1-AS1Q9BWJ2 59 aa10.92□□□□□ -0.66
NR1H3-231ENST00000529540 TRBV25-1A0A075B6N4 114 aa10.92□□□□□ -0.66
NR1H3-231ENST00000529540 TMEM238C9JI98 176 aa10.92□□□□□ -0.66
NR1H3-231ENST00000529540 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.92□□□□□ -0.66
NR1H3-231ENST00000529540 CEND1Q8N111 149 aa10.92□□□□□ -0.66
NR1H3-231ENST00000529540 LINC00482Q8N8I6 264 aa10.92□□□□□ -0.66
NR1H3-231ENST00000529540 IGHV4-4A0A075B6R2 117 aa10.91□□□□□ -0.66
NR1H3-231ENST00000529540 ZNF207O43670 478 aaKnown RBP10.91□□□□□ -0.66
NR1H3-231ENST00000529540 ERCC8Q13216 396 aa10.91□□□□□ -0.66
NR1H3-231ENST00000529540 SAMD13Q5VXD3 122 aa10.91□□□□□ -0.66
NR1H3-231ENST00000529540 IGFL4Q6B9Z1 124 aa10.91□□□□□ -0.66
NR1H3-231ENST00000529540 IGKV3D-20A0A0C4DH25 116 aa10.9□□□□□ -0.66
NR1H3-231ENST00000529540 PRAC2D3DTV9 90 aa10.9□□□□□ -0.66
NR1H3-231ENST00000529540 E9PLD3 99 aa10.9□□□□□ -0.66
NR1H3-231ENST00000529540 INSL3P51460 131 aa10.9□□□□□ -0.66
NR1H3-231ENST00000529540 ZC2HC1BQ5TFG8 222 aa10.9□□□□□ -0.66
NR1H3-231ENST00000529540 NRACQ8N912 160 aa10.9□□□□□ -0.66
NR1H3-231ENST00000529540 DYNLRB2Q8TF09 96 aa10.9□□□□□ -0.66
NR1H3-231ENST00000529540 A0A087WX48 190 aa10.89□□□□□ -0.67
NR1H3-231ENST00000529540 GATA1P15976 413 aaPredicted RBP10.89□□□□□ -0.67
NR1H3-231ENST00000529540 LAGE3Q14657 143 aa10.89□□□□□ -0.67
NR1H3-231ENST00000529540 GTSCR1Q86UQ5 136 aa10.89□□□□□ -0.67
NR1H3-231ENST00000529540 GLMPQ8WWB7 406 aa10.89□□□□□ -0.67
NR1H3-231ENST00000529540 FBN1P35555 2871 aaKnown RBP10.89□□□□□ -0.67
NR1H3-231ENST00000529540 TRAV12-1A0A0B4J245 112 aa10.88□□□□□ -0.67
NR1H3-231ENST00000529540 TRAV25A0A0B4J276 109 aa10.88□□□□□ -0.67
NR1H3-231ENST00000529540 PLNP26678 52 aa10.88□□□□□ -0.67
NR1H3-231ENST00000529540 TTTY13Q9BZ97 58 aa10.88□□□□□ -0.67
NR1H3-231ENST00000529540 C11orf21Q9P2W6 132 aa10.88□□□□□ -0.67
NR1H3-231ENST00000529540 IGHV3-49A0A0A0MS15 119 aa10.87□□□□□ -0.67
NR1H3-231ENST00000529540 IGLL5B9A064 214 aa10.87□□□□□ -0.67
NR1H3-231ENST00000529540 SCGB1A1P11684 91 aa10.87□□□□□ -0.67
NR1H3-231ENST00000529540 C9orf66Q5T8R8 295 aa10.87□□□□□ -0.67
NR1H3-231ENST00000529540 WFDC9Q8NEX5 89 aa10.87□□□□□ -0.67
NR1H3-231ENST00000529540 MRAP2Q96G30 205 aa10.87□□□□□ -0.67
NR1H3-231ENST00000529540 MDFIQ99750 246 aa10.87□□□□□ -0.67
NR1H3-231ENST00000529540 AGPAT4-IT1Q9H0P7 198 aa10.87□□□□□ -0.67
NR1H3-231ENST00000529540 MRPL35Q9NZE8 188 aaKnown RBP10.87□□□□□ -0.67
NR1H3-231ENST00000529540 IGHV3OR16-13A0A075B7E8 117 aa10.86□□□□□ -0.67
NR1H3-231ENST00000529540 IGHV3-74A0A0B4J1X5 117 aa10.86□□□□□ -0.67
NR1H3-231ENST00000529540 TRAV8-2A0A0B4J237 113 aa10.86□□□□□ -0.67
NR1H3-231ENST00000529540 IGHV3-66A0A0C4DH42 116 aa10.86□□□□□ -0.67
NR1H3-231ENST00000529540 K7ERJ3 54 aa10.86□□□□□ -0.67
NR1H3-231ENST00000529540 RPL11P62913 178 aaKnown RBP10.86□□□□□ -0.67
NR1H3-231ENST00000529540 C9orf47Q6ZRZ4 202 aa10.86□□□□□ -0.67
NR1H3-231ENST00000529540 NHP2Q9NX24 153 aaKnown RBP10.86□□□□□ -0.67
NR1H3-231ENST00000529540 A0A1B0GWB2 263 aa10.85□□□□□ -0.67
NR1H3-231ENST00000529540 F8W1H4 67 aa10.85□□□□□ -0.67
NR1H3-231ENST00000529540 MAPKAPK5-AS1Q8N8E1 139 aa10.85□□□□□ -0.67
NR1H3-231ENST00000529540 SPATA3Q8NHX4 192 aa10.85□□□□□ -0.67
NR1H3-231ENST00000529540 TRAV2A0A0B4J234 112 aa10.85□□□□□ -0.67
NR1H3-231ENST00000529540 TEX48A0A1B0GUV7 120 aa10.85□□□□□ -0.67
NR1H3-231ENST00000529540 DEFB114Q30KQ6 69 aa10.85□□□□□ -0.67
NR1H3-231ENST00000529540 C12orf74Q32Q52 190 aa10.85□□□□□ -0.67
NR1H3-231ENST00000529540 TMEM78Q5T7P6 136 aa10.85□□□□□ -0.67
NR1H3-231ENST00000529540 FOXI2Q6ZQN5 318 aa10.85□□□□□ -0.67
NR1H3-231ENST00000529540 RNF182Q8N6D2 247 aa10.85□□□□□ -0.67
NR1H3-231ENST00000529540 TRBV7-3A0A075B6L6 115 aa10.84□□□□□ -0.67
NR1H3-231ENST00000529540 H7C1H1 209 aa10.84□□□□□ -0.67
NR1H3-231ENST00000529540 LENEPQ9Y5L5 61 aa10.84□□□□□ -0.67
NR1H3-231ENST00000529540 F8VRH5 84 aa10.83□□□□□ -0.68
NR1H3-231ENST00000529540 K7EMI3 77 aa10.83□□□□□ -0.68
NR1H3-231ENST00000529540 IGLV1-51P01701 117 aa10.83□□□□□ -0.68
NR1H3-231ENST00000529540 RPL24P83731 157 aaKnown RBP10.83□□□□□ -0.68
NR1H3-231ENST00000529540 ZNF479Q96JC4 524 aa10.83□□□□□ -0.68
NR1H3-231ENST00000529540 SPAG8Q99932 426 aaPredicted RBP10.83□□□□□ -0.68
NR1H3-231ENST00000529540 SMIM2Q9BVW6 85 aa10.83□□□□□ -0.68
NR1H3-231ENST00000529540 SPANXB1Q9NS25 103 aaPredicted RBP10.83□□□□□ -0.68
NR1H3-231ENST00000529540 SELENOKQ9Y6D0 94 aa10.83□□□□□ -0.68
NR1H3-231ENST00000529540 ID1P41134 155 aa10.82□□□□□ -0.68
NR1H3-231ENST00000529540 COL6A5A8TX70 2615 aa10.82□□□□□ -0.68
NR1H3-231ENST00000529540 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.82□□□□□ -0.68
NR1H3-231ENST00000529540 J3QR89 54 aa10.82□□□□□ -0.68
NR1H3-231ENST00000529540 EDN2P20800 178 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms